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| Registros recuperados: 57 | |
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| Segatto,Ana Lúcia Anversa; Thompson,Claudia Elizabeth; Freitas,Loreta Brandão. |
| Abstract Developmental genes are believed to contribute to major changes during plant evolution, from infrageneric to higher levels. Due to their putative high sequence conservation, developmental genes are rarely used as molecular markers, and few studies including these sequences at low taxonomic levels exist. WUSCHEL-related homeobox genes (WOX) are transcription factors exclusively present in plants and are involved in developmental processes. In this study, we characterized the infrageneric genetic variation of Petunia WOX genes. We obtained phylogenetic relationships consistent with other phylogenies based on nuclear markers, but with higher statistical support, resolution in terminals, and compatibility with flower morphological changes. |
| Tipo: Info:eu-repo/semantics/article |
Palavras-chave: Molecular phylogeny; Recently diverged species; Developmental genes. |
| Ano: 2016 |
URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572016000400658 |
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| Ventura,Karen; Silva,Maria José de Jesus; Yonenaga-Yassuda,Yatiyo. |
| A novel karyotype with 2n = 50, FN = 48, was described for specimens of Thaptomys collected at Una, State of Bahia, Brazil, which are morphologically indistinguishable from Thaptomys nigrita, 2n = 52, FN = 52, found in other localities. It was hence proposed that the 2n = 50 karyotype could belong to a distinct species, cryptic of Thaptomys nigrita, once chromosomal rearrangements observed, along with the geographic distance, might represent a reproductive barrier between both forms. Phylogenetic analyses using maximum parsimony and maximum likelihood based on partial cytochrome b sequences with 1077 bp were performed, attempting to establish the relationships among the individuals with distinct karyotypes along the geographic distribution of the genus;... |
| Tipo: Info:eu-repo/semantics/article |
Palavras-chave: Atlantic Rainforest; Cytochrome b; Endemism; Molecular phylogeny; Thaptomys. |
| Ano: 2010 |
URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572010000200010 |
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| Silva-Bernardi,Erica C.C.; Morales,Adriana C.; Sene,Fabio M.; Manfrin,Maura H.. |
| The repleta group is one of the largest and most complex species groups in the genus Drosophila, representing an important biological model for the elaboration of evolutionary and biogeographical hypotheses on the American Continent. It is divided into six subgroups, of which the fasciola subgroup is the only one with most of its species found in the humid forests of Central and South America. With the aim of understanding the origin and evolution of the fasciola subgroup, and consequently adding information about the repleta group, we analyzed partial sequences of the mitochondrial cytochrome oxidase subunit I (COI) gene of nine Drosophila species (D. carolinae, D. coroica, D. ellisoni, D. fascioloides, D. ivai, D. moju, D. onca, D. rosinae and D. senei).... |
| Tipo: Info:eu-repo/semantics/article |
Palavras-chave: Fasciola subgroup; Molecular phylogeny; MtDNA; Systematics; Repleta group. |
| Ano: 2006 |
URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572006000300029 |
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| Nunes,Cláudia; Ayres,Jose Marcio; Sampaio,Iracilda; Schneider,Horacio. |
| Previous cytochrome B (CytB) mtDNA studies have suggested four species for the opossum genus Philander (four-eyed opossums), three (P. mcilhennyi, P. andersoni and P. opossum) from the Amazon and one (P. frenata) from the Brazilian Atlantic forest. During a faunal survey nine specimens of Philander sp. and four of Didelphis marsupialis were collected in the Mamirauá Sustainable Reserve, Amazonas State, Brazil. Preliminary analyses based on morphology and geographical distributions were not conclusive, suggesting that Philander specimens could belong to either P. andersoni or P. opossum. In order to elucidate the relationship of this taxon to the remaining Amazonian taxa, seven Philander and two Didelphis specimens animals were sequenced for the cytB mtDNA... |
| Tipo: Info:eu-repo/semantics/article |
Palavras-chave: Cytochrome B; Mamirauá; Molecular phylogeny; MtDNA; Philander; Pouched four-eyed opossum. |
| Ano: 2006 |
URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572006000200015 |
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| Dong, Dong; Xu, Peng; Li, Xin-zheng; Wang, Chunsheng. |
| Several squat lobster specimens of the genus Munidopsis were collected from an artificially placed carcass fall (cow bones) on Weijia Guyot in the western Pacific Ocean. Based on morphological comparisons and molecular analysis, three specimens were confirmed as juveniles of M. albatrossae Pequegnat & Pequegnat, 1973, which represents the first record of this species in the western Pacific. The other specimens collected are newly described as Munidopsis spinifrons sp. nov., which is distinguished from the closely related species in having a spinose rostrum and basal lateral eyespine on the eyestalk. The M. albatrossae from Weijia Guyot exhibited very low genetic distances when compared with a conspecific sample from Monterey Bay, USA, and the closely... |
| Tipo: Text |
Palavras-chave: Munidopsis; Carcass fall; Weijia Guyot; New species; Molecular phylogeny. |
| Ano: 2019 |
URL: https://archimer.ifremer.fr/doc/00659/77083/78430.pdf |
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| Chomerat, Nicolas; Sellos, Daniel Y.; Zentz, Frederic; Nezan, Elisabeth. |
| A new marine benthic Prorocentrum species from sandy habitats of South Brittany (northwestern France), P. consutum sp. nov., is described using LM and SEM and molecular phylogenetic analyses. Cells have a subcircular to broadly ovoid shape and are plainly flattened. They are 57-61 lm long and 52-55 lm wide. A central pyrenoid is present, and the kidney-shaped nucleus is positioned in the posterior region. In right valve view, the periflagellar area is deeply excavated, and the left valve forms a prominent apical ridge. The periflagellar area consists of nine platelets, and a small narrow collar is present around the flagellar pore. The ornamentation of this new species is very peculiar and is characterized by a ring of round areolae located at the... |
| Tipo: Text |
Palavras-chave: Taxonomy; SSU rDNA; SEM; Prorocentrum; Nuclear DNA; Molecular phylogeny; LSU rDNA; Dinoflagellates. |
| Ano: 2010 |
URL: http://archimer.ifremer.fr/doc/2010/publication-7449.pdf |
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| Nezan, Elisabeth; Bilien, Gwenael; Boulben, Sylviane; Mertens, Kenneth; Chomerat, Nicolas. |
| A new marine raphid diatom, Plagiolemma distortum Nézan, sp. nov. is described from plankton samples from the Atlantic Ocean, south Brittany (north-western France), where it was regularly observed, but never in high abundances. Cells have an unusual and complex shape under light microscopy (LM) depending on their position and orientation. The two valves are highly vaulted and narrow in width (transapical axis). Cells contain four complexly lobed plastids and a variable number of refractive granules without particular localization. In addition, capsules containing motile cells were observed. Ultrastructural details of the frustules were investigated using scanning electron microscopy (SEM). The girdle bands are simple. Each valve possesses a sigmoid raphe... |
| Tipo: Text |
Palavras-chave: Capsules; Habitat; Molecular phylogeny; Plastids; Raphid diatom; Video. |
| Ano: 2018 |
URL: https://archimer.ifremer.fr/doc/00441/55235/56797.pdf |
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| Fricke, Ronald; Chen, Jhen-nien; Chen, Wei-jen. |
| The unusual clingfish Protogobiesox asymmetricus n. gen, n. sp. is described on the basis of four specimens collected in deep water off the north coast of Papua New Guinea in 2012. The species is characterized by its 9-10 dorsal rays, 8 anal rays, 17-24 pectoral-fin rays, 15 principal caudal-fin rays, 3 gills, third arch with 3 gill rakers, 34-35 total vertebrae, with asymmetrical lateral bending starting behind the skull, bent at an angle of 858-928; skull asymmetrical in frontal view; skin naked, surface of head and body without striae; disc without adhesive papillae. A new subfamily Protogobiesocinae is described for this species and Lepadicyathus mendeleevi Prokofiev, 2005, which is redescribed. The new subfamily is compared within the family; keys to... |
| Tipo: Text |
Palavras-chave: Gobiesocidé; Porte-écuelles; Nouvelle sous-famille; Nouveau genre; Nouvelle espèce; Papouasie-Nouvelle-Guinée; Phylogénie moléculaire; Expédition biodiversité PAPUA NIUGINI; Gobiesocidae; Clingfishes; New subfamily; New genus; New species; Papua New Guinea; Molecular phylogeny; PAPUA NIUGINI biodiversity expedition. |
| Ano: 2017 |
URL: https://archimer.ifremer.fr/doc/00476/58805/61519.pdf |
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| Chomerat, Nicolas; Saburova, Maria; Bilien, Gwenael; Al-yamani, Faiza. |
| A new benthic dinoflagellate species, Prorocentrum bimaculatum sp. nov., is studied from Kuwaits marine sediments, based on detailed morphological and molecular data. Cells are large, oblong oval in shape. They are 49.955.3 mu m long and 38.443.2 mu m wide. The ornamentation of this new species is peculiar, and characterized by smooth valves with large pores (0.320.50 mu m) scattered on their surface, except in two circular patches of similar to 15 mu m in diameter, devoid of ornamentation and located on both sides of the valve centers. The periflagellar area is widely triangular, located in a moderate excavation of the right valve, and comprises nine platelets. The intercalary band of P. bimaculatum is smooth. The molecular phylogenetic position of this... |
| Tipo: Text |
Palavras-chave: Arabian Gulf; Benthic dinoflagellates; Kuwait; Molecular phylogeny; Morphology; Nuclear DNA; Prorocentrum; RDNA; SEM; Taxonomy. |
| Ano: 2012 |
URL: http://archimer.ifremer.fr/doc/00066/17756/15698.pdf |
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| Saburova, Maria; Chomerat, Nicolas. |
| A new photosynthetic, sand-dwelling marine dinoflagellate, Ailadinium reticulatum gen. et sp. nov., is described from the Jordanian coast in the Gulf of Aqaba, northern Red Sea, based on detailed morphological and molecular data. A. reticulatum is a large (53–61 μm long and 38–48 μm wide), dorsoventrally compressed species, with the epitheca smaller than the hypotheca. The theca of this new species is thick and peculiarly ornamented with round to polygonal depressions forming a foveate-reticulate thecal surface structure. The Kofoidian thecal tabulation is APC (Po, cp), 4′, 2a, 6′′, 6c, 4s, 6′′′, 1p, 1′′′′ or alternatively it can be interpreted as APC, 4′, 2a, 6′′, 6c, 4s, 6′′′, 2′′′′. The plate pattern of A. reticulatum is noticeably different from... |
| Tipo: Text |
Palavras-chave: Benthic dinoflagellates; Dinophyceae; Gulf of Aqaba; Jordan; LSU rDNA; Molecular phylogeny; Morphology; Red Sea; SSU rDNA; Taxonomy. |
| Ano: 2014 |
URL: http://archimer.ifremer.fr/doc/00226/33678/38183.pdf |
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| Certad, Gabriela; Zahedi, Alireza; Gantois, Nausicaa; Sawant, Manasi; Creusy, Colette; Duval, Erika; Benamrouz-vanneste, Sadia; Ryan, Una; Viscogliosi, Eric. |
| Current knowledge of Cryptosporidium species/genotypes in marine fish is limited. Following phylogenetic analysis at the 18S rDNA locus, a recent study identified six new genotypes of Cryptosporidium colonizing edible fish found in European seas. Of these, five grouped in a clade together (#Cryptofish 1–5) and one grouped separately (#Cryptofish 7). In the present study, after phylogenetic analyses of #Cryptofish1, #Cryptofish2, #Cryptofish4, #Cryptofish5 and #Cryptofish7 at the actin locus, the presence of two major clades was confirmed. In addition, when possible, longer 18S amplicons were generated. In conclusion, the small genetic distances between these genotypes designated as a novel marine genotype I (#Cryptofish 1-5) suggest that they may be... |
| Tipo: Text |
Palavras-chave: Piscine Cryptosporidium; Edible marine fish; Genetic characterization; 18S rDNA gene; Actin gene; Molecular phylogeny. |
| Ano: 2020 |
URL: https://archimer.ifremer.fr/doc/00665/77741/79864.pdf |
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| Luo, Zhaohe; Lim, Zhen Fei; Mertens, Kenneth; Krock, Bernd; Teng, Sing Tung; Tan, Toh Hii; Leaw, Chui Pin; Lim, Po Teen; Gu, Haifeng. |
| The gonyaulacean family Protoceratiaceae is characterised by five precingular plates. It currently encompasses the type genus Ceratocorys and the fossil genus Atopodinium. Fourteen strains of Ceratocorys, Pentaplacodinium, and Protoceratium were established from Malaysian and Hawaiian waters, and their morphologies were examined using light and scanning electron microscopy. Two new species, Ceratocorys malayensis sp. nov. and Pentaplacodinium usupianum sp. nov., were described from Malaysian waters. They share a Kofoidean plate formula of Po, Pt, 3ʹ, 1a, 6ʹʹ, 6C, 6S, 5ʹʹʹ, 1p, 1ʹʹʹʹ. Ceratocorys malayensis has a short first apical plate (1ʹ) with no direct contact with the anterior sulcal plate (Sa) whereas Pentaplacodinium usupianum had a... |
| Tipo: Text |
Palavras-chave: Ceratocoryaceae; Gonyaulacaceae; Molecular phylogeny; Protoceratium reticulatum; Yessotoxin. |
| Ano: 2020 |
URL: https://archimer.ifremer.fr/doc/00589/70143/68109.pdf |
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| Lopez Flores, L; Suarez Santiago, V; Longet, D; Saulnier, Denis; Chollet, Bruno; Arzul, Isabelle. |
| Bonamia ostreae is a protozoan parasite that infects the European flat oyster Ostrea edulis, causing systemic infections and resulting in massive mortalities in populations of this valuable bivalve species. In this work, we have characterized B. ostreae actin genes and used their sequences for a phylogenetic analysis. Design of different primer sets was necessary to amplify the central coding region of actin genes of B. ostreae. Characterization of the sequences and their amplification in different samples demonstrated the presence of 2 intragenomic actin genes in B. ostreae, without any intron. The phylogenetic analysis placed B. ostreae in a clade with Minchinia tapetis, Minchinia teredinis and Haplosporidium costale as its closest relatives, and... |
| Tipo: Text |
Palavras-chave: Molecular phylogeny; Actin gene; Ostrea edulis parasite; Bonamia ostreae. |
| Ano: 2007 |
URL: http://archimer.ifremer.fr/doc/2007/publication-3562.pdf |
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| Luo, Zhaohe; Lim, Zhen Fei; Mertens, Kenneth; Gurdebeke, Pieter; Bogus, Kara; Carbonell-moore, Maria Consuelo; Vrielinck, Henk; Leaw, Chui Pin; Lim, Po Teen; Chomerat, Nicolas; Li, Xintian; Gu, Haifeng. |
| The dinoflagellate genus Bysmatrum encompasses five epibenthic or tide-pool species and has been characterized by separated anterior intercalary plates. In the present study, we obtained six strains of Bysmatrum from the South China Sea and French Atlantic coast by isolating single cells/cysts from plankton and sediment samples. All strains were examined with light microscopy and scanning electron microscopy. Based on morphological observations, three strains were identified as Bysmatrum subsalsum, characterized by the elongated and rectangular first and a hexagonal second anterior intercalary plate. They differ from each other in the number of sulcal lists and the configuration of the first anterior intercalary plate. One strain was identified as... |
| Tipo: Text |
Palavras-chave: Benthic dinoflagellate; Biogeography; Bysmatrum granulosum; Bysmatrum gregarium; Bysmatrum subsalsum; Eyespot; Molecular phylogeny. |
| Ano: 2018 |
URL: https://archimer.ifremer.fr/doc/00450/56188/57872.pdf |
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| Saburova, Maria; Chomerat, Nicolas. |
| A small Prorocentrum species was found during a pilot taxonomic survey of marine benthic dinoflagellates in the northwestern Arabian Sea, Oman. Based on the study of cells from natural samples and laboratory cultures using light and scanning electron microscopy, this taxon is attributed to the little-known Prorocentrum sipadanense, recorded so far only from East Malaysia. The description of this species has been emended to include details of internal cell structure, composition of its periflagellar area and intraspecific variability in size, shape and pore pattern. Round to oval or ovoid cells of P. sipadanese are surrounded by a prominent marginal ridge and are 17.9–23.9 µm long and 15.0–19.8 µm wide, with a foveate to reticulate thecal plate surface and... |
| Tipo: Text |
Palavras-chave: Arabian Sea; Benthic dinoflagellates; Molecular phylogeny; Morphology; Oman; Prorocentrum sipadanense; Taxonomy. |
| Ano: 2016 |
URL: http://archimer.ifremer.fr/doc/00319/42990/42560.pdf |
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| Sauvadet, Anne-laure; Lynn, Denis H.; Roussel, Erwan; Le Panse, Sophie; Bigeard, Estelle; Schrevel, Joseph; Guillou, Laure. |
| Microscopic and phylogenetic analyses were performed on endocommensal astome ciliates retrieved from the middle intestine of a marine cirratulid polychaete, Cirriformia tentaculata, collected in the bay of Roscoff (English Channel, Northwest French coast) and on the Southwest English coast. Three morphotypes of the astome genus Durchoniella were identified, two corresponding to described species (the type species Durchoniella brasili (Léger and Duboscq, 1904) de Puytorac, 1954 and Durchoniella legeriduboscqui de Puytorac, 1954) while a third morphotype remains undescribed. Their small subunit (SSU) rRNA gene sequences showed at least 97.2% identity and phylogenetic analyses grouped them at the base of the subclass Scuticociliatia (Oligohymenophorea), as a... |
| Tipo: Text |
Palavras-chave: Astomatida; Ciliophora; Cirratulidae; Endocytoplasmic bacteria; Microscopy; Molecular phylogeny. |
| Ano: 2017 |
URL: http://archimer.ifremer.fr/doc/00392/50312/50990.pdf |
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| Registros recuperados: 57 | |
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