| Registro completo |
| Provedor de dados: |
ArchiMer
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| País: |
France
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| Título: |
Colonization of plant substrates at hydrothermal vents and cold seeps in the northeast Atlantic and Mediterranean and occurrence of symbiont-related bacteria
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| Autores: |
Szafranski, Kamil M.
Deschamps, Philippe
Cunha, Marina R.
Gaudron, Sylvie M.
Duperron, Sebastien
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| Data: |
2015-02
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| Ano: |
2015
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| Palavras-chave: |
Cold seeps
Colonization
Deep-sea
Symbiont
Hydrothermal vents
Wood falls
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| Resumo: |
Reducing conditions with elevated sulfide and methane concentrations in ecosystems such as hydrothermal vents, cold seeps or organic falls, are suitable for chemosynthetic primary production. Understanding processes driving bacterial diversity, colonization and dispersal is of prime importance for deep-sea microbial ecology. This study provides a detailed characterization of bacterial assemblages colonizing plant-derived substrates using a standardized approach over a geographic area spanning the North-East Atlantic and Mediterranean. Wood and alfalfa substrates in colonization devices were deployed for different periods at 8 deep-sea chemosynthesis-based sites in four distinct geographic areas. Pyrosequencing of a fragment of the 16S rRNA-encoding gene was used to describe bacterial communities. Colonization occurred within the first 14 days. The diversity was higher in samples deployed for more than 289 days. After 289 days, no relation was observed between community richness and deployment duration, suggesting that diversity may have reached saturation sometime in between. Communities in long-term deployments were different, and their composition was mainly influenced by the geographical location where devices were deployed. Numerous sequences related to horizontally-transmitted chemosynthetic symbionts of metazoans were identified. Their potential status as free-living forms of these symbionts was evaluated based on sequence similarity with demonstrated symbionts. Results suggest that some free-living forms of metazoan symbionts or their close relatives, such as Epsilonproteobacteria associated with the shrimp Rimicans exoculata, are efficient colonizers of plant substrates at vents and seeps.
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| Tipo: |
Text
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| Idioma: |
Inglês
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| Identificador: |
https://archimer.ifremer.fr/doc/00382/49383/49804.pdf
https://archimer.ifremer.fr/doc/00382/49383/49805.xlsx
https://archimer.ifremer.fr/doc/00382/49383/49806.xlsx
https://archimer.ifremer.fr/doc/00382/49383/49807.xlsx
https://archimer.ifremer.fr/doc/00382/49383/49808.xlsx
https://archimer.ifremer.fr/doc/00382/49383/49809.xlsx
https://archimer.ifremer.fr/doc/00382/49383/49810.fasta
https://archimer.ifremer.fr/doc/00382/49383/49811.tif
https://archimer.ifremer.fr/doc/00382/49383/49812.tif
https://archimer.ifremer.fr/doc/00382/49383/49813.tiff
https://archimer.ifremer.fr/doc/00382/49383/49814.tif
https://archimer.ifremer.fr/doc/00382/49383/49815.jpeg
DOI:10.3389/fmicb.2015.00162
https://archimer.ifremer.fr/doc/00382/49383/
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| Editor: |
Frontiers Media Sa
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| Relação: |
info:eu-repo/grantAgreement/EC/FP7/96905/EU//SYMBIOMICS
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| Formato: |
application/pdf
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| Fonte: |
Frontiers In Microbiology (1664-302X) (Frontiers Media Sa), 2015-02 , Vol. 6 , N. 162 , P. 1-14
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| Direitos: |
2015 Szafranski, Deschamps, Cunha, Gaudron and Duperron. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
info:eu-repo/semantics/openAccess
restricted use
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