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Microbial Diversity and Biosignatures: An Icy Moons Perspective ArchiMer
Jebbar, Mohamed; Hickman-lewis, Keyron; Cavalazzi, Barbara; Taubner, Ruth-sophie; Rittmann, Simon K.-m. R.; Antunes, Andre.
The icy moons of the outer Solar System harbor potentially habitable environments for life, however, compared to the terrestrial biosphere, these environments are characterized by extremes in temperature, pressure, pH, and other physico-chemical conditions. Therefore, the search for life on these icy worlds is anchored on the study of terrestrial extreme environments (termed “analogue sites”), which harbor microorganisms at the frontiers of polyextremophily. These so-called extremophiles have been found in areas previously considered sterile: hot springs, hydrothermal vents, acidic or alkaline lakes, hypersaline environments, deep sea sediments, glaciers, and arid areas, amongst others. Such model systems and communities in extreme terrestrial environments...
Tipo: Text Palavras-chave: Extremophiles; Prokaryotes; Metabolism; Diversity; Adaptation; Space explorat.
Ano: 2020 URL: https://archimer.ifremer.fr/doc/00606/71771/70275.pdf
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Caractérisation de l’adaptation comportementale des téléostéens en élevage : plasticité et effets de la domestication ArchiMer
Benhaim, David.
The farming of aquatic animals has started recently in comparison with that of terrestrial species which domestication started 10 500 years ago. Aquaculture is however the fastest growing animal food-production sector. This sector has now to face several challenges threatening its sustainability. Indeed, aquaculture future largely depends upon the reduction of the reliance on feeds based ingredients derived from wild fishery resources, upon a better knowledge of fish domestication process and of the adaptation mechanisms and related welfare potential. The present work aims at a better understanding of the adaptation to farming conditions through a behavioural approach based on the comparison between wild vs. domesticated populations of three species: a...
Tipo: Text Palavras-chave: Adaptation; Plasticité; Domestication; Bien-être; Comportement alimentaire; Activité de nage; Personnalité; Aliment végétal; Labyrinthe; Statut physiologique; Croissance; Aquaculture; Repeuplement; Adaptation; Plasticity; Learning; Domestication; Welfare; Feeding behaviour; Swimming activity; Personality; Plant-based diet; Maze; Physiological status; Growth; Aquaculture; Restocking.
Ano: 2011 URL: http://archimer.ifremer.fr/doc/00078/18926/16515.pdf
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Adaptative response of Listeria monocylogenes to osmotic and chill stress: consequences on food safety. ArchiMer
Elmnasser, Noura; Ritz Bricaud, Magali; Guillou, Sandrine; Leroi, Francoise; Orange, Nicole; Bakhrouf, Amira; Federighi, Michel.
Listeria monocytogenes is it psychrotrophic food-borne pathogen. This organism is problematic for food production industry due to its ubiquitous distribution ill nature and its tolerance to condition of osmotic and chill stress. One common strategy employed by many bacteria and by L. monocytogenes for adaptation to osmotic stress is by the intracellular accumulation of compatible solutes. Two different types of adaptative reponses to low temperature have undertaken by L. monocytogenes. One of the responses is accomplished by adjusting membrane fluidity through alteration of the membrane fatty acid composition. A second response consists ill the accumulation of osmolytes. In this brief review we will focus on these general systems Which are Of particular...
Tipo: Text Palavras-chave: Food safety; Chill stres; Osmotic stress; Adaptation; Listeria monocytogenes; Sécurité des aliments; Stress froid; Stress salin; Adaptation; Listeria monocytogenes.
Ano: 2006 URL: http://archimer.ifremer.fr/doc/2006/publication-2549.pdf
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The future is now: marine aquaculture in the anthropocene ArchiMer
Pernet, Fabrice; Browman, Howard I.
Aquaculture now produces more seafood than wild capture fisheries and this production is expected to at least double by 2050. Representing almost half of global production, marine aquaculture will contribute to sustainably feeding the growing humanity. However, climate change will undoubtedly challenge the future growth of marine aquaculture. Temperature and sea-level rise, shifts in precipitation, freshening from glacier melt, changing ocean productivity, and circulation patterns, increasing occurrence of extreme climatic events, eutrophication, and ocean acidification are all stressors that will influence marine aquaculture. The objective of this themed article set was to bring together contributions on the broad theme of the potential impacts,...
Tipo: Text Palavras-chave: Adaptation; Bivalve; Blue economy; Carbon; Climate change; Marine diseases; Mitigation; Ocean acidification; Plasticity; Salmon; Seaweed; Sustainability.
Ano: 2021 URL: https://archimer.ifremer.fr/doc/00682/79406/81951.pdf
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Environmental factors controlling biomass development of seagrass meadows of Zostera noltei after a drastic decline (Arcachon Bay, France) ArchiMer
Cognat, Mathis; Ganthy, Florian; Auby, Isabelle; Barraquand, Frederic; Rigouin, Loic; Sottolichio, Aldo.
The relative impact of light, depth, hydrology, hydrodynamics, sediment and nutrients on growth of the seagrass Zostera noltei was investigated in Arcachon Bay, where the extent of seagrass beds has been decreasing for 20 years. A comprehensive multi-parameter survey of 9 sites was conducted monthly over one year. A three-parameter logistic growth model was fitted to biomass data to unravel the relative contributions of environmental factors on seagrass growth. The present study highlights the fact that, in addition to the dominant positive effect of light on plant growth, the hydrological and hydrodynamic parameters were important drivers for Z. noltei growth at the scale of the whole Bay. At the scale of individual sites, other factors such as macroalgal...
Tipo: Text Palavras-chave: Physical parameters; Light; Hydrodynamics; Adaptation; Statistical growth model.
Ano: 2018 URL: https://archimer.ifremer.fr/doc/00451/56229/57789.pdf
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Maximum Economic Yield Fishery Management in the Face of Global Warming ArchiMer
Diop, Bassirou; Sanz, Nicolas; Junior Duplan, Yves Jamont; Guene, El Hadji Mama; Blanchard, Fabian; Pereau, Jean-christophe; Doyen, Luc.
This paper deals with fishery management in the face of the ecological and economic effects of global warming. To achieve this, a dynamic bioeconomic model and model-based scenarios are considered, in which the stock's growth function depends on the sea surface temperature. The model is empirically calibrated for the French Guiana shrimp fishery using time series collected over the period 1993–2009. Three fishing effort strategies are then compared under two contrasted IPCC climate scenarios (RCP 8.5 and RCP 2.6). A first harvesting strategy maintains the Status Quo in terms of fishing effort. A more ecologically-oriented strategy based on the closure of the fishery is also considered. A third strategy, which relates to Maximum Economic Yield (MEY), is...
Tipo: Text Palavras-chave: Renewable resources; Fishery bioeconomic model; Climate change; Climate scenarios; Adaptation; Shrimp.
Ano: 2018 URL: https://archimer.ifremer.fr/doc/00453/56418/58115.pdf
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Highly contrasted responses of Mediterranean octocorals to climate change along a depth gradient ArchiMer
Pivotto, I. D.; Nerini, D.; Masmoudi, M.; Kara, H.; Chaoui, L.; Aurelle, D..
Climate change has a strong impact on marine ecosystems, including temperate species. Analysing the diversity of thermotolerance levels within species along with their genetic structure enables a better understanding of their potential response to climate change. We performed this integrative study on the Mediterranean octocoral Eunicella cavolini, with samples from different depths and by means of a common garden experiment. This species does not host photosynthetic Symbiodinium, enabling us to focus on the cnidarian response. We compared the thermotolerance of individuals from 20 m and 40 m depths from the same site and with replicates from the same colony. On the basis of an innovative statistical analysis of necrosis kinetics and risk, we demonstrated...
Tipo: Text Palavras-chave: Climate change; Adaptation; Acclimatization; Eunicella cavolini; Mediterranean sea; Population genetics.
Ano: 2015 URL: https://archimer.ifremer.fr/doc/00371/48264/48637.pdf
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Une méthode de suivi de la vulnérabilité systémique à l’érosion et la submersion marines ArchiMer
Meur-ferec, Catherine; Le Berre, Iwan; Cocquempot, Lucie; Guillou, Elisabeth; Henaff, Alain; Lami, Thibaut; Le Dantec, Nicolas; Letortu, Pauline; Philippe, Manuelle; Nous, Camille.
Coastal development, combined with the intrinsic mobility of coasts and the context of climate change, tends to increase the vulnerability of coastal territories. This article proposes, on one hand, a renewed interdisciplinary approach to the concept of vulnerability allowing to overcome the nature/society dichotomy. On the other hand, the paper presents an inter-sectoral researchers-managers approach to build a series of indicators to monitor the four components of systemic vulnerability (hazards, stakes, management and representations). These indicators lay the ground for an integrated observatory, source of data for research as well as to inform decisions regarding the adaptation of coastal territories.
Tipo: Text Palavras-chave: Coastal risks; Erosion; Sea-flooding; Vulnerability; Interdisciplinary; Intersectorality; Indicators; Adaptation; Observatory.
Ano: 2020 URL: https://archimer.ifremer.fr/doc/00629/74122/73559.pdf
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Multigenerational exposure of the microalga Tetraselmis suecica to diuron leads to spontaneous long-term strain adaptation. ArchiMer
Stachowski-haberkorn, Sabine; Jerome, Marc; Rouxel, Julien; Khelifi, Celia; Rince, Maeva; Burgeot, Thierry.
To investigate the ability of microalgae to develop stable, long-term resistance to herbicides, the marine microalga Tetraselmis suecica was exposed to the herbicide diuron (5 µg/L) for a 43-generation exposure period followed by a 12-generation depuration phase. During the first 25 generations, diuron-exposed cultures showed doubling times ranging from 1.95 to 2.6 days, which was 2 to 2.5-fold longer than control cultures. Between generations 25 and 38, during diuron exposure, two out of the three exposed cultures exhibited a spontaneous drop in doubling time. These results provided evidence of culture adaptation to diuron. To assess persistence of the diuron adaptation observed on growth performance, one of the adapted cultures (D3) was maintained for 12...
Tipo: Text Palavras-chave: Microalgae; Diuron; Multigenerational; Adaptation; Flow cytometry.
Ano: 2013 URL: http://archimer.ifremer.fr/doc/00146/25718/23796.pdf
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Domestication, sélection et comportement du bar: variabilité des aptitudes comportementales et de la tolérance au stress de groupes génétiquement distincts de bar, Dicentrarchus labrax ArchiMer
Millot, Sandie.
The culture of aquatic species has grown much more rapidly in recent years than that of terrestrial species. Consequently, aquatic livestock welfare is a growing concern for society. However, unlike the many studies of terrestrial animal welfare, few scientific data exist concerning fish welfare. It is generally recognized that the aquaculture environment exposes fish to many repeated stress factors which affect their health, growth, reproductive performance and feeding behaviour. Even if stress responses do not highlight all welfare disturbances, it is generally admitted that they reveal a poor welfare. Among the solutions investigated to reduce fish stress, domestication and selection appear to be the favoured approaches. However, selection has generally...
Tipo: Text Palavras-chave: Personality; Physiological status; Growth; Swimming behaviour; Feeding behaviour; Stress tolerance; Adaptation; Welfare; Chronic stress; Acute stress; Selection; Domestication; Dicentrarchus labrax; Personnalité; Statut physiologique; Croissance; Comportement natatoire; Comportement alimentaire; Tolérance au stress; Adaptation; Bien être; Stress chronique; Stress aigu; Sélection; Domestication; Dicentrarchus labrax.
Ano: 2008 URL: http://archimer.ifremer.fr/doc/2008/these-6272.pdf
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Relationships between sediments and tissue contamination and allozymic patterns in Hediste diversicolor (Polychaeta Nereididae) in the Pialassa lagoons (north Adriatic Sea) ArchiMer
Virgilio, M; Baroncini, N; Trombini, C; Abbiati, M.
An increasing number of investigations revealed that responses of populations to environmental stressors may be genetically dependent. Occurrence of genetic adaptation to high concentrations of heavy metals in Hediste diversicolor local ecotypes has also been hypothesised. Analyses of allozymic patterns are a promising tool for the genetic monitoring of environmental stressors. The aim of this study was to investigate whether the allozymic patterns of H. diversicolor could be affected by levels of contamination. Five sites were investigated: four in a polluted brackish habitat, the Pialassa lagoons, and a reference site in the Lamone estuary. Total mercury was used as a tracer of the overall level of contamination. Concentrations of mercury were quantified...
Tipo: Text Palavras-chave: Hediste diversicolor; Contamination; Structure génétique; Adaptation; Systèmes enzymatiques; Hediste diversicolor; Contamination; Genetic structure; Adaptation; Allozyme.
Ano: 2003 URL: http://archimer.ifremer.fr/doc/00322/43288/43023.pdf
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High evolutionary potential of marine zooplankton Naturalis
Peijnenburg, K.T.C.A.; Goetze, E..
Open ocean zooplankton often have been viewed as slowly evolving species that have limited capacity to respond adaptively to changing ocean conditions. Hence, attention has focused on the ecological responses of zooplankton to current global change, including range shifts and changing phenology. Here, we argue that zooplankton also are well poised for evolutionary responses to global change. We present theoretical arguments that suggest plankton species may respond rapidly to selection on mildly beneficial mutations due to exceptionally large population size, and consider the circumstantial evidence that supports our inference that selection may be particularly important for these species. We also review all primary population genetic studies of open ocean...
Tipo: Article / Letter to the editor Palavras-chave: Adaptation; Climate change; Marine; Oceanic; Selection; Zooplankton; 42.72; 42.94.
Ano: 2013 URL: http://www.repository.naturalis.nl/record/470572
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Optics and phylogeny: is there an insight? The evolution of superposition eyes in the Decapoda (Crustacea) Naturalis
Gaten, Edward.
This paper addresses the use of eye structure and optics in the construction of crustacean phylogenies and presents an hypothesis for the evolution of superposition eyes in the Decapoda, based on the distribution of eye types in extant decapod families. It is suggested that reflecting superposition optics are symplesiomorphic for the Decapoda, having evolved only once, probably in the Devonian. Subsequent loss of reflecting superposition optics has occurred following the adoption of a new habitat (e.g. Aristeidae, Aeglidae) or by progenetic paedomorphosis (Paguroidea, Eubrachyura).
Tipo: Article / Letter to the editor Palavras-chave: Compound eyes; Superposition optics; Adaptation; Evolution; Decapod crustaceans; Phylogeny.
Ano: 1998 URL: http://www.repository.naturalis.nl/record/534404
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I made use of the known dates of reclamation (and of afforestations) in the IJsselmeerpolders in The Netherlands to assess evolutionary adaptation in Cepaea nemoralis. At 12 localities (three in each polder), I sampled a total of 4390 adult individuals in paired open and shaded habitats, on average 233m apart, and scored these for genetic shell colour polymorphisms. The results show (highly) significant differentiation at most localities, although the genes involved differed per locality. Overall, though, populations in shaded habitats had evolved towards darker shells than those in adjacent open habitats, whereas a 'Cain & Sheppard' diagram (proportion yellow shells plotted against ‘effectively unbanded’ shells) failed to reveal a clear pattern. This might suggest that thermal selection is more important than visual selection in generating this pattern. Trait differentiation, regardless of whether they were plotted against polder age or habitat age, showed a linear increase of differentiation with time, corresponding to a mean rate of trait evolution of 15–31 kilodarwin. In conclusion, C. nemoralis is capable of rapid and considerable evolutionary differentiation over 1–25 snail generations, though equilibrium may be reached only at longer time scales Naturalis
Schilthuizen, M..
I made use of the known dates of reclamation (and of afforestations) in the IJsselmeerpolders in The Netherlands to assess evolutionary adaptation in Cepaea nemoralis. At 12 localities (three in each polder), I sampled a total of 4390 adult individuals in paired open and shaded habitats, on average 233m apart, and scored these for genetic shell colour polymorphisms. The results show (highly) significant differentiation at most localities, although the genes involved differed per locality. Overall, though, populations in shaded habitats had evolved towards darker shells than those in adjacent open habitats, whereas a 'Cain & Sheppard' diagram (proportion yellow shells plotted against ‘effectively unbanded’ shells) failed to reveal a clear pattern. This...
Tipo: Article / Letter to the editor Palavras-chave: Predation; Crypsis; Contemporary evolution; Gastropoda; Mollusca; Adaptation; 42.73.
Ano: 2013 URL: http://www.repository.naturalis.nl/record/445782
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Evolutionary ecology of the Pachydontinae (Bivalvia, Corbulidae) in the Pebas lake/wetland system (Miocene, western Amazonia) Naturalis
Wesselingh, F.P..
Miocene deposits in western Amazonia and adjacent areas of South America harbour a diverse suite of endemic corbulid bivalves, commonly referred to as Pachydontinae, that show a wide variety of morphologies. Especially in the Miocene Pebas Formation (Peru, Colombia and Brazil), this group diversified spectacularly. Since these corbulids (a cosmopolitan marine and perimarine bivalve family) occur with freshwater taxa and yield isotope signals strongly indicative of freshwater settings, the success of this group in inland basins of Miocene northwestern South America is surprising. In this paper it is argued that a combination of adaptations to fluid bottom substrates, common dysoxia and high predation intensities explains their abundance, their morphological...
Tipo: Article / Letter to the editor Palavras-chave: Corbulidae; Pachydontinae; Miocene; Amazonia; Evolution; Adaptation; 42.73; 38.22.
Ano: 2006 URL: http://www.repository.naturalis.nl/record/209734
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Morphology of immature stages in the neotropical nonfrugivorous Tephritinae Fruit Fly Species Rachiptera limbata Bigot (Diptera: Tephritidae) on Baccharis linearis (R. et Pav.) (Asteraceae) Neotropical Entomology
Frías,Daniel.
Rachiptera limbata Bigot develops on Baccharis linearis (R. et Pav.) in the areas around Santiago, Chile. The larvae feed on stem tissues and secrete a liquid that hardens to form a protective feeding and pupation chamber. The immature stages of Neotropical species of Tephritinae are poorly known. In this paper, the morphology of the immature stages of R. limbata are described and compared, in a phylogenetic context, with other Tephritinae species. Antennomaxillary complex, pads, oral ridge, cephalopharyngeal skeleton, anterior and posterior spiracles and anal lobes of first-, second-, third-instar larvae and pupae were studied with optical and scanning electron microscopy. The cephalopharyngeal skeleton is darkly sclerotized and shows an opening or window...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Adaptation; Neoteny; Plesiomorphic; Apomorphic traits.
Ano: 2008 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1519-566X2008000500006
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Biological parameters of Bemisia tabaci (Gennadius) biotype B (Hemiptera: Aleyrodidae) on Jatropha gossypiifolia, commercial (Manihot esculenta) and wild cassava (Manihot flabellifolia and M. carthaginensis) (Euphorbiaceae) Neotropical Entomology
Carabalí,Arturo; Belloti,Anthony C; Montoya-Lerma,James.
Bemisia tabaci (Gennadius) is one of the most important pests of cassava in Africa and several countries of Asia due to the damage caused by direct feeding, the excretion of honeydew, and its capacity as a vector of cassava mosaic geminivirus. There is a general consensus that B. tabaci is a complex of morphologically indistinguishable populations with different biotypes. In the Americas, the polyphagous biotype B does not appear to feed on cassava. Recent studies indicate that it is possible, however, for biotype B to gradually adapt to cassava using phylogenetically related hosts. Therefore, the possibility that some wild species of cassava constitute intermediate hosts in the adaptation process may lead to the establishment of biotype B on commercial...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Adaptation; Trophic relationship; Whitefly.
Ano: 2010 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1519-566X2010000400015
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Intermittent sustained swimming in 'matrinxã' Brycon amazonicus (Bryconidae: Bryconinae): hematological and metabolic responses Neotropical Ichthyology
Fabrizzi,Fernando; Moraes,Gilberto; Hackbarth,Araceli; Almeida,Luciana Cristina de; Arbeláez-Rojas,Gustavo; Nunes,Cleujosí da Silva.
In fish, studies on a wide variety of physiological effects of exercise have been reported since a long time. It has been attributed special attention to some types of exercise, however, its application as a healthful practice in the rearing and welfare of farming fish is rising in last few years. In this particular, long-term intermittent sustained swimming (ISS) has been not yet explored. In this work, the freshwater fish Brycon amazonicus was submitted to (ISS) for 30 days at velocity of 1.0 body-length sec-1 for 12h interspaced by 12h under still water. Hematology and metabolism were evaluated. Exercised fish decreased 30% the erythrocyte number and hemoglobin was unvaried. The stores of liver glycogen and muscular triacylglycerol (TAG) were increased...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Adaptation; Exercise; Fish; Glycogen; Metabolism; Triacylglycerol.
Ano: 2013 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1679-62252013000200425
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Adaptation to Climate Change in the Developing World OceanDocs
Huq, S.; Adger, W.N.; Brown, K.; Hulme, M..
The world’s climate is changing and will continue to change into the coming century at rates projected to be unprecedented in recent human history. The risks associated with these changes are real but highly uncertain. Societal vulnerability to the risks associated with climate change may exacerbate ongoing social and economic challenges, particularly for those parts of societies dependent on resources that are sensitive to changes in climate. Risks are apparent in agriculture, fisheries and many other components that constitute the livelihood of rural populations in developing countries. In this paper we explore the nature of risk and vulnerability in the context of climate change and review the evidence on present-day adaptation in developing countries...
Tipo: Journal Contribution Palavras-chave: Adaptation; Vulnerability; Climate change; Environmental policy; Developing countries; Climate change; Http://aims.fao.org/aos/agrovoc/c_35367.
Ano: 2003 URL: http://hdl.handle.net/1834/833
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Chickpea kabuli variety ICCV 6 Open Agri
Palavras-chave: Sowing date; Root nodulation; Chickpeas; Tolerance; Land management; Fungi; Yields; Research methods; Tropical zones; Adaptation.
Ano: 1988 URL: http://agropedia.iitk.ac.in/openaccess/?q=node/3135
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