|
|
|
| Registros recuperados: 27 | |
|
| |
|
|
| Lorion, Julien; Duperron, Sebastien; Gros, Olivier; Cruaud, Corinne; Samadi, Sarah. |
| Bathymodiolin mussels occur at hydrothermal vents and cold seeps, where they thrive thanks to symbiotic associations with chemotrophic bacteria. Closely related genera Idas and Adipicola are associated with organic falls, ecosystems that have been suggested as potential evolutionary 'stepping stones' in the colonization of deeper and more sulphide-rich environments. Such a scenario should result from specializations to given environments from species with larger ecological niches. This study provides molecular-based evidence for the existence of two mussel species found both on sunken wood and bones. Each species specifically harbours one bacterial phylotype corresponding to thioautotrophic bacteria related to other bathymodiolin symbionts. Phylogenetic... |
| Tipo: Text |
Palavras-chave: Idas; Adipicola; Molecular taxonomy; Organic falls; Symbiosis; Thioautotrophy. |
| Ano: 2009 |
URL: https://archimer.ifremer.fr/doc/00206/31680/30056.pdf |
| |
|
|
| Durand, Lucile; Zbinden, Magali; Cueff-gauchard, Valerie; Duperron, Sebastien; Roussel, Erwan; Shillito, Bruce; Cambon-bonavita, Marie-anne. |
| Rimicaris exoculata dominates the megafauna of several Mid-Atlantic Ridge hydrothermal sites. Its gut is full of sulphides and iron-oxide particles and harbours microbial communities. Although a trophic symbiosis has been suggested, their role remains unclear. In vivo starvation experiments in pressurized vessels were performed on shrimps from Rainbow and Trans-Atlantic Geotraverse sites in order to expel the transient gut contents. Microbial communities associated with the gut of starved and reference shrimps were compared using 16S rRNA gene libraries and microscopic observations (light, transmission and scanning electron microscopy and FISH analyses). We show that the gut microbiota of shrimps from both sites included mainly Deferribacteres, Mollicutes,... |
| Tipo: Text |
Palavras-chave: Deferribacteres; Midgut epibiosis; Mollicutes; Proteobacteria; Rimicaris exoculata; Starvation experiment. |
| Ano: 2010 |
URL: http://archimer.ifremer.fr/doc/00000/11142/7919.pdf |
| |
|
|
| Duperron, Sebastien; Pottier, Marie-anne; Leger, Nelly; Gaudron, Sylvie M.; Puillandre, Nicolas; Le Prieur, Stephanie; Sigwart, Julia D.; Ravaux, Juliette; Zbinden, Magali. |
| Although most chitons (Mollusca: Polyplacophora) are shallow-water molluscs, diverse species also occur in deep-sea habitats. We investigated the feeding strategies of two species, Leptochiton boucheti and Nierstraszella lineata, recovered on sunken wood sampled in the western Pacific, close to the Vanuatu Islands. The two species display distinctly different associations with bacterial partners. Leptochiton boucheti harbours Mollicutes in regions of its gut epithelium and has no abundant bacterium associated with its gill. Nierstraszella lineata displays no dense gut-associated bacteria, but harbours bacterial filaments attached to its gill epithelium, related to the Deltaproteobacteria symbionts found in gills of the wood-eating limpet Pectinodonta sp.... |
| Tipo: Text |
Palavras-chave: Sunken wood; Polyplacophora; Symbiosis; Mollicutes; Deltaproteobacteria; Deep-sea ecology. |
| Ano: 2013 |
URL: https://archimer.ifremer.fr/doc/00138/24933/23035.pdf |
| |
|
|
| Bayon, Germain; Loncke, L.; Dupre, Stephanie; Caprais, Jean-claude; Ducassou, E.; Duperron, Sebastien; Etoubleau, Joel; Foucher, Jean-paul; Fouquet, Yves; Gontharet, S.; Henderson, G. M.; Huguen, Caroline; Klaucke, I.; Mascle, J.; Migeon, S.; Olu-le-roy, Karine; Ondreas, Helene; Pierre, C.; Sibuet, Myriam; Stadnitskaia, A.; Woodside, J.. |
| We report on a multidisciplinary study of cold seeps explored in the Central Nile deep-sea fan of the Egyptian margin. Our approach combines in situ seafloor observation, geophysics, sedimentological data, measurement of bottom-water methane anomalies, pore-water and sediment geochemistry, and Th-230/U dating of authigenic carbonates. Two areas were investigated, which correspond to different sedimentary provinces. The lower slope, at similar to 2100 m water depth, indicates deformation of sediments by gravitational processes, exhibiting slope-parallel elongated ridges and seafloor depressions. In contrast, the middle slope, at similar to 1650 m water depth, exhibits a series of debris-flow deposits not remobilized by post-depositional gravity processes.... |
| Tipo: Text |
Palavras-chave: Authigenic carbonate; U Th; Cold seep; Continental margin; Nile. |
| Ano: 2009 |
URL: http://archimer.ifremer.fr/doc/2009/publication-6586.pdf |
| |
|
|
| Duperron, Sebastien; Fiala Medioni, Aline; Caprais, Jean-claude; Olu, Karine; Sibuet, Myriam. |
| Symbioses between lucinid clams (Bivalvia: Lucinidae) and autotrophic sulphide-oxidizing bacteria have mainly been studied in shallow coastal species, and information regarding deep-sea species is scarce. Here we study the symbiosis of a clam, resembling Lucinoma kazani, which was recently collected in sediment cores from new cold-seep sites in the vicinity of the Nile deep-sea fan, eastern Mediterranean, at depths ranging from 507 to 1691 m. A dominant bacterial phylotype, related to the sulphide-oxidizing symbiont of Lucinoma aequizonata, was identified in gill tissue by comparative 16S rRNA gene sequence analysis. A second phylotype, related to spirochete sequences, was identified twice in a library of 94 clones. Comparative analyses of gene sequences... |
| Tipo: Text |
Palavras-chave: Eastern Mediterranean; Cold seeps; Lucinoma; Lucinidae; Sulphide oxidizing bacteria; Symbiosis. |
| Ano: 2007 |
URL: http://archimer.ifremer.fr/doc/2007/publication-2176.pdf |
| |
|
| |
|
| |
|
|
| Duperron, Sebastien; Rodrigues, Clara F.; Leger, Nelly; Szafranski, Kamil; Decker, Carole; Olu, Karine; Gaudron, Sylvie M.. |
| Fauna from deep-sea cold seeps worldwide is dominated by chemosymbiotic metazoans. Recently, investigation of new sites in the Gulf of Guinea yielded numerous new species for which symbiosis was strongly suspected. In this study, symbioses are characterized in five seep-specialist metazoans recently collected from the Guiness site located at ∼600 m depth. Four bivalve and one annelid species belonging to families previously documented to harbor chemosynthetic bacteria were investigated using bacterial marker gene sequencing, fluorescence in situ hybridization, and stable isotope analyses. Results support that all five species display chemosynthetic, sulfur-oxidizing γ-proteobacteria. Bacteria are abundant in the gills of bivalves, and in the trophosome of... |
| Tipo: Text |
Palavras-chave: Acharax; Calyptogena; Chemosynthesis; Cold seeps; Elenaconcha; Gulf of Guinea; Lamellibrachia; Symbiosis; Thyasira. |
| Ano: 2012 |
URL: http://archimer.ifremer.fr/doc/00133/24418/22432.pdf |
| |
|
|
| Lorion, Julien; Halary, Sebastien; Do Nasciment, Joana; Samadi, Sarah; Couloux, Arnaud; Duperron, Sebastien. |
| Small mytilids of the genus Ildas are related to the large mussels found worldwide at deep-sea hydrothermal vents and cold seeps. They are therefore keys to a better understanding of the colonization of vents and seeps by symbiont-bearing organisms, but still little is known about their biology. For this study, specimens of a mytilid referred to the genus Idas were collected from various substrates in a cold seep area near the Nile deep sea fan. Based on molecular and morphological data, all specimens are confirmed to belong to a single species of the genus Idas, which was previously shown to host six distinct bacterial symbionts. Its larval shell characteristics indicate a long planktonic phase, which could explain its close relationship to a mussel... |
| Tipo: Text |
Palavras-chave: Idas; Planktotrophy; Organic falls; Cold seeps; Symbiosis. |
| Ano: 2012 |
URL: http://archimer.ifremer.fr/doc/00133/24425/22436.pdf |
| |
|
|
| Duperron, Sebastien; Bergin, C; Zielinski, F; Blazejak, A; Pernthaler, A; Mckiness, Z; Dechaine, E; Cavanaugh, C; Dubilier, Nicole. |
| Bathymodiolus azoricus and Bathymodiolus puteoserpentis are symbiont-bearing mussels that dominate hydrothermal vent sites along the northern Mid-Atlantic Ridge (MAR). Both species live in symbiosis with two physiologically and phylogenetically distinct Gammaproteobacteria: a sulfur-oxidizing chemoautotroph and a methane-oxidizer. A detailed analysis of mussels collected from four MAR vent sites (Menez Gwen, Lucky Strike, Rainbow, and Logatchev) using comparative 16S rRNA sequence analysis and fluorescence in situ hybridization (FISH) showed that the two mussel species share highly similar to identical symbiont phylotypes. FISH observations of symbiont distribution and relative abundances showed no obvious differences between the two host species. In... |
| Tipo: Text |
Palavras-chave: Bacteria; Phylogeny; Fluorescence in situ hybridization (FISH); Methane oxidizer; Sulfur oxidizer; 16S rRNA; Endosymbiosis. |
| Ano: 2006 |
URL: http://archimer.ifremer.fr/doc/2006/publication-1864.pdf |
| |
|
|
| Duperron, Sebastien; Laurent, Melina Cz; Gaill, Francoise; Gros, Olivier. |
| Six morphotypes of small mussels (Bivalvia: Mytilidae) were found attached to naturally sunken wood collected in the Bohol Sea (Philippines). These specimens are related to the large Bathymodiolus mussels that are found worldwide at cold seeps and hydrothermal vents. In these habitats, the mytilids harbour sulphur- and methane-oxidizing endosymbionts in their gills and depend on the energy and carbon provided by the symbionts. In this study, bacteria associated with the gills of wood-associated mussels are characterized using molecular and microscopic techniques. The existence of bacteria in the lateral zone of gill filaments in all specimens is demonstrated. Comparative analyses of 16S rRNA gene and adenosine 5'-phosphosulphate (APS) reductase gene... |
| Tipo: Text |
Palavras-chave: Sulphur-oxidizing bacteria; Bathymodiolus; Idas; Adipicola; Sunken woods; Bohol sea. |
| Ano: 2008 |
URL: https://archimer.ifremer.fr/doc/00466/57808/60093.pdf |
| |
|
|
| Ritt, Benedicte; Duperron, Sebastien; Lorion, Julien; Lazar, Cassandre; Sarrazin, Jozee. |
| Recently, small Idas-like mussels have been discovered living on carbonate crusts associated with cold-seeps in the Marmara Sea. These mussels, here referred to as Idas-like nov. sp., differ morphologically and genetically from another species identified as Idas aff. modiolaeformis, living in the same type of ecosystem in the Nile Deep-Sea Fan (eastern Mediterranean Sea). A phylogenetic analysis confirms the distinction between the two species, which belong to highly divergent lineages. Carbon stable isotope values, as well as the detection of thiotroph-related bacteria in the gill tissue, support the presence of a symbiotic, thiotroph-derived nutrition. In contrast, Idas aff. modiolaeformis displays six different types of symbionts. Finally our... |
| Tipo: Text |
Palavras-chave: Mytilidae; Idas-like; Cold-seeps; Marmara Sea; Phylogeny; Symbiosis; Stable isotopes. |
| Ano: 2012 |
URL: http://archimer.ifremer.fr/doc/00098/20915/19672.pdf |
| |
|
|
| Duperron, Sebastien; Halary, S; Lorion, J; Sibuet, Myriam; Gaill, F. |
| Bathymodioline mussels occur in chemosynthesis-based ecosystems such as cold seeps, hydrothermal vents and organic debris worldwide. Their key adaptation to these environments is their association with bacterial endosymbionts which ensure a chemosynthetic primary production based on the oxidation of reduced compounds such as methane and sulfide. We herein report a multiple symbiosis involving six distinct bacterial 16S rRNA phylotypes, including two belonging to groups not yet reported as symbionts in mytilids, in a small Idas mussel found on carbonate crusts in a cold seep area located north to the Nile deep-sea fan (Eastern Mediterranean). Symbionts co-occur within hosts bacteriocytes based on fluorescence in situ hybridizations, and sequencing of... |
| Tipo: Text |
Palavras-chave: Eastern Mediterranean; Cold seeps; Bathymodiolus; Idas; Mytilidae; Symbiosis. |
| Ano: 2008 |
URL: http://archimer.ifremer.fr/doc/2008/publication-3928.pdf |
| |
|
|
| Decker, Carole; Olu, Karine; Arnaud-haond, Sophie; Duperron, Sebastien. |
| Vesicomyid clams harbor intracellular sulfur-oxidizing bacteria that are predominantly maternally inherited and co-speciate with their hosts. Genome recombination and the occurrence of non-parental strains were recently demonstrated in symbionts. However, mechanisms favoring such events remain to be identified. In this study, we investigated symbionts in two phylogenetically distant vesicomyid species, Christineconcha regab and Laubiericoncha chuni, which sometimes co-occur at a cold-seep site in the Gulf of Guinea. We showed that each of the two species harbored a single dominant bacterial symbiont strain. However, for both vesicomyid species, the symbiont from the other species was occasionally detected in the gills using fluorescence in situ... |
| Tipo: Text |
|
| Ano: 2013 |
URL: http://archimer.ifremer.fr/doc/00153/26427/24527.pdf |
| |
|
|
| Duperron, Sebastien; Nadalig, Thierry; Caprais, Jean-claude; Sibuet, Myriam; Fiala Medioni, Aline; Amann, Rudolf; Dubilier, Nicole. |
| Deep-sea mussels of the genus Bathymodiolus (Bivalvia: Mytilidae) harbor symbiotic bacteria in their gills and are among the dominant invertebrate species at cold seeps and hydrothermal vents. An undescribed Bathymodiolus species was collected at a depth of 3,150 m in a newly discovered cold seep area on the southeast Atlantic margin, close to the Zaire channel. Transmission electron microscopy, comparative 16S rRNA analysis, and fluorescence in situ hybridization indicated that this Bathymodiolus sp. lives in a dual symbiosis with sulfide- and methane-oxidizing bacteria. A distinct distribution pattern of the symbiotic bacteria in the gill epithelium was observed, with the thiotrophic symbiont dominating the apical region and the methanotrophic symbiont... |
| Tipo: Text |
Palavras-chave: Gabon; Southeast Atlantic; Methane seep; Hydrothermal vent; Deep sea; RRNA analysis; Methane concentration; Gill epithelium; Symbiosis; Bacteria; Mytilidae. |
| Ano: 2005 |
URL: http://archimer.ifremer.fr/doc/2005/publication-1266.pdf |
| |
|
|
| Duperron, Sebastien; Gaudron, Sylvie M.; Rodrigues, Clara; Cunha, Marina R.; Decker, Carole; Olu, Karine. |
| Deep-sea bivalves found at hydrothermal vents, cold seeps and organic falls are sustained by chemosynthetic bacteria which ensure part or all of their carbon nutrition. These symbioses are of prime importance for the functioning of the ecosystems. Similar symbioses occur in other bivalve species living in shallow and coastal reduced habitats worldwide. In recent years, several deep-sea species have been investigated from continental margins around Europe, West Africa, East America, the Gulf of Mexico, and from hydrothermal vents on the Mid-Atlantic Ridge. In parallel, numerous more easily accessible shallow marine species were studied. We here provide a summary of the current knowledge available on chemosymbiotic bivalves in the area ranging west-to-east... |
| Tipo: Text |
|
| Ano: 2012 |
URL: http://archimer.ifremer.fr/doc/00133/24417/22431.pdf |
| |
|
|
| Gallet, Alison; Koubbi, Philippe; Léger, Nelly; Scheifler, Mathilde; Ruiz-rodriguez, Magdalena; Suzuki, Marcelino T.; Desdevises, Yves; Duperron, Sebastien. |
| Myctophids are among the most abundant mesopelagic teleost fishes worldwide. They are dominant in the Southern Ocean, an extreme environment where they are important both as consumers of zooplankton as well as food items for larger predators. Various studies have investigated myctophids diet, but no data is yet available regarding their associated microbiota, despite that the significance of bacterial communities to fish health and adaptation is increasingly acknowledged. In order to document microbiota in key fish groups from the Southern Ocean, the bacterial communities associated with the gut, fin, gills and light organs of members of six species within the three myctophid genera Electrona, Protomyctophum and Gymnoscopelus were characterized using a 16S... |
| Tipo: Text |
|
| Ano: 2019 |
URL: https://archimer.ifremer.fr/doc/00598/70973/69202.pdf |
| |
|
|
| Piquet, Berenice; Shillito, Bruce; Lallier, Francois H.; Duperron, Sebastien; Andersen, Ann C.. |
| Symbiosis between Bathymodiolus and Gammaproteobacteria allows these deep-sea mussels to live in toxic environments such as hydrothermal vents and cold seeps. The quantity of endosymbionts within the gill-bacteriocytes appears to vary according to the hosts environment; however, the mechanisms of endosymbiont population size regulation remain obscure. We investigated the possibility of a control of endosymbiont density by apoptosis, a programmed cell death, in three mussel species. Fluorometric TUNEL and active Caspase-3-targeting antibodies were used to visualize and quantify apoptotic cells in mussel gills. To control for potential artefacts due to depressurization upon specimen recovery from the deep-sea, the apoptotic rates between mussels recovered... |
| Tipo: Text |
|
| Ano: 2019 |
URL: https://archimer.ifremer.fr/doc/00484/59526/62500.pdf |
| |
|
|
| Cambon-bonavita, Marie-anne; Nadalig, Thierry; Roussel, Erwan; Delage, Eloise; Duperron, Sebastien; Caprais, Jean-claude; Boetius, A.; Sibuet, Myriam. |
| A giant 800-m-diameter pockmark named REGAB was discovered on the Gabon continental margin actively emitting methane at a water depth of 3200 m. The microbial diversity in sediments from four different assemblages of chemosynthetic organisms, Mytilidae, Vesicomyidae, Sibogliniclae and a bacterial mat, was investigated using comparative 16S rRNA gene sequence analysis. Aggregates of anaerobic methanotrophic archaea (ANME-2) and bacteria of the Desulfosarcina/Desulfococcus cluster were found in all four chemosynthetic habitats. Fluorescence in situ hybridization targeting the ANME-2/Desulfosarcina/Desulfococcus aggregates showed their presence few centimeters (3-5cm) below the surface of sediment. 16S rRNA gene sequences from all known marine ANME groups... |
| Tipo: Text |
Palavras-chave: Microbial phylogeny; Faunal assemblage; Cold seep; Chemosynthetic ecosystems; AOM; REGAB. |
| Ano: 2009 |
URL: https://archimer.ifremer.fr/doc/2009/publication-7298.pdf |
| |
| Registros recuperados: 27 | |
|
|
|
