Consulta: creatorFacets:"Toffin, Laurent"
Registros recuperados: 21
Data/hora: 09/06/2024 14:39:13

Early diagenesis in the sediments of the Congo deep-sea fan dominated by massive terrigenous deposits: Part III – Sulfate- and methane- based microbial processes
Provedor de dados: 5
Autores: Pastor, Lucie; Toffin, Laurent; Decker, Carole; Olu, Karine; Cathalot, Cecile; Lesongeur, Francoise; Caprais, Jean-claude; Bessette, Sandrine; Brandily, Christophe; Taillefert, M.; Rabouille, C.
Geochemical profiles (SO42-, H2S, CH4, δ13CH4) and phylogenetic diversity of Archaea and Bacteria from two oceanographic cruises dedicated to the lobes sediments of the Congo deep-sea fan are presented in this paper. In this area, organic-rich turbidites reach 5000 m and allow the establishment of patchy cold-seep-like habitats including microbial mats, reduced sediments, and vesicomyid bivalves assemblages. These bivalves live in endosymbiosis with sulfur-oxidizing bacteria and use sulfides to perform chemosynthesis. In these habitats, unlike classical abyssal sediments, anoxic processes are dominant. Total oxygen uptake fluxes and methane fluxes measured with benthic chambers are in the same range as those of active cold-seep environments, and oxygen is...
Tipo: Text
Ano: 2017
URL: http://archimer.ifremer.fr/doc/00376/48767/49164.pdf

New Insights into the Ecology and Physiology of Methanomassiliicoccales from Terrestrial and Aquatic Environments
Provedor de dados: 5
Autores: Cozannet, Marc; Borrel, Guillaume; Roussel, Erwan; Moalic, Yann; Allioux, Maxime; Sanvoisin, Amandine; Toffin, Laurent; Alain, Karine.
Members of the archaeal order Methanomassiliicoccales are methanogens mainly associated with animal digestive tracts. However, environmental members remain poorly characterized as no representatives not associated with a host have been cultivated so far. In this study, metabarcoding screening combined with quantitative PCR analyses on a collection of diverse non-host-associated environmental samples revealed that Methanomassiliicoccales were very scarce in most terrestrial and aquatic ecosystems. Relative abundance of Methanomassiliicoccales and substrates/products of methanogenesis were monitored during incubation of environmental slurries. A sediment slurry enriched in Methanomassiliicoccales was obtained from a freshwater sample. It allowed the...
Tipo: Text
Palavras-chave: Methanomassiliicoccales; Cultivation; Methyl-compounds; Environmental cluster; Networks.
Ano: 2021
URL: https://archimer.ifremer.fr/doc/00665/77716/79808.pdf

Relative abundance and diversity of bacterial methanotrophs at the oxic-anoxic interface of the Congo deep-sea fan
Provedor de dados: 5
Autores: Bessette, Sandrine; Moalic, Yann; Gautey, Sebastien; Lesongeur, Francoise; Godfroy, Anne; Toffin, Laurent.
Sitting at ~5 000 m water depth on the Congo-Angola margin and ~ 760 km offshore of the West African coast, the recent lobe complex of the Congo deep-sea fan receives large amounts of fluvial sediments (3-5% organic carbon). This organic-rich sedimentation area harbors habitats with chemosynthetic communities similar to those of cold seeps. In this study, we investigated relative abundance, diversity and distribution of aerobic methane-oxidizing bacteria (MOB) communities at the oxic-anoxic interface of sedimentary habitats by using fluorescence in situ hybridization and comparative sequence analysis of particulate mono-oxygenase (pmoA) genes. Our findings revealed that sedimentary habitats of the recent lobe complex hosted type I and type II MOB cells and...
Tipo: Text
Palavras-chave: Aerobic methane-oxidizing bacteria; PmoA; Organic-rich sediment; Methane seeps; Congo deep-sea fan.
Ano: 2017
URL: https://archimer.ifremer.fr/doc/00382/49327/49706.pdf

The Congolobe project, a multidisciplinary study of Congo deep-sea fan lobe complex: Overview of methods, strategies, observations and sampling
Provedor de dados: 5
Autores: Rabouille, C.; Olu, Karine; Baudin, F.; Khripounoff, Alexis; Dennielou, Bernard; Arnaud-haond, Sophie; Babonneau, Nathalie; Bayle, Christophe; Beckler, J.; Bessette, Sandrine; Bombled, B.; Bourgeois, S.; Brandily, Christophe; Caprais, Jean-claude; Cathalot, Cecile; Charlier, K.; Corvaisier, R.; Croguennec, Chantal; Cruaud, Perrine; Decker, Carole; Droz, L.; Gayet, Nicolas; Godfroy, Anne; Hourdez, S.; Le Bruchec, J.; Saout, Johan; Le Saout, Marie-helene; Lesongeur, Francoise; Martinez, P.; Mejanelle, L.; Michalopoulos, P.; Mouchel, Olivier; Noel, Philippe; Pastor, Lucie; Picot, M.; Pignet, Patricia; Pozzato, L.; Pruski, A. M.; Rabiller, Manuella; Raimonet, M.; Ragueneau, O.; Reyss, J. L.; Rodier, Philippe; Ruesch, Blandine; Ruffine, Livio; Savignac, F.; Senyarich, C.; Schnyder, J.; Sen, Arunima; Stetten, E.; Sun, Ming Yi; Taillefert, M.; Teixeira, S.; Tisnerat-laborde, N.; Toffin, Laurent; Tourolle, Julie; Toussaint, F.; Vetion, G.; Jouanneau, J. M.; Bez, M.
The presently active region of the Congo deep-sea fan (around 330 000 km2), called the terminal lobes or lobe complex, covers an area of 2500 km2 at 4700–5100 m water depth and 750–800 km offshore. It is a unique sedimentary area in the world ocean fed by a submarine canyon and a channel-levee system which presently deliver large amounts of organic carbon originating from the Congo River by turbidity currents. This particularity is due to the deep incision of the shelf by the Congo canyon, up to 30 km into the estuary, which funnels the Congo River sediments into the deep-sea. The connection between the river and the canyon is unique for major world rivers.  In 2011, two cruises (WACS leg 2 and Congolobe) were conducted to simultaneously investigate the...
Tipo: Text
Palavras-chave: Chemosynthetic habitats; Congo deep-sea fan; Fine sediment; Sedimentation rate; Seafloor morphology; Turbidite; Vesicomyidae.
Ano: 2017
URL: http://archimer.ifremer.fr/doc/00335/44580/44298.pdf

Phylogenetic and Functional Diversity of Microbial Communities Associated with Subsurface Sediments of the Sonora Margin, Guaymas Basin
Provedor de dados: 5
Autores: Vigneron, Adrien; Cruaud, Perrine; Roussel, Erwan; Pignet, Patricia; Caprais, Jean-claude; Callac, Nolwenn; Ciobanu, Maria Cristina; Godfroy, Anne; Cragg, Barry A.; Parkes, John R.; Van Nostrand, Joy D.; He, Zhili; Zhou, Jizhong; Toffin, Laurent.
Subsurface sediments of the Sonora Margin (Guaymas Basin), located in proximity of active cold seep sites were explored. The taxonomic and functional diversity of bacterial and archaeal communities were investigated from 1 to 10 meters below the seafloor. Microbial community structure and abundance and distribution of dominant populations were assessed using complementary molecular approaches (Ribosomal Intergenic Spacer Analysis, 16S rRNA libraries and quantitative PCR with an extensive primers set) and correlated to comprehensive geochemical data. Moreover the metabolic potentials and functional traits of the microbial community were also identified using the GeoChip functional gene microarray and metabolic rates. The active microbial community structure...
Tipo: Text
Ano: 2014
URL: http://archimer.ifremer.fr/doc/00203/31408/29801.pdf

Measuring the biological impact of drilling waste on the deep seafloor: an experimental challenge
Provedor de dados: 5
Autores: Lelchat, F.; Dussauze, M.; Lemaire, P; Theron, M.; Toffin, Laurent; Le Floch, Stephane.
The depletion of traditional oil fields is driving the oil &amp; gas industry to explore new exploitation sites previously considered as unprofitable. Deep-sea oil fields represent one of these new areas of exploitation. Well drilling during exploration and production operations generate large quantities of drilling waste whose biological impact on the deep-sea floor remains largely unknown. Because of the harsh abiotic factors characterizing this environment, the evaluation of this impact remains challenging. High hydrostatic pressure is the prominent factor which will affect in-situ biological processes. This review will examine the feedback on the various strategies used to evaluate the biological impact of deep-sea drilling waste deposition as well as...
Tipo: Text
Palavras-chave: Drill cutting; Drilling waste; Ecotoxicology; Bioassay; Hydrostatic pressure; Deep-sea; Environmental assessment.
Ano: 2020
URL: https://archimer.ifremer.fr/doc/00603/71561/69988.pdf

Methanococcoides
Provedor de dados: 5
Autores: L'Haridon, Stephane; Toffin, Laurent; Roussel, Erwan.
Me.tha.no.coc.co'i.des. Gr. adj. suff. ‐oides similar to; N.L. neut. n. Methanococcoides organism similar to Methanococcus. Euryarchaeota / Methanomicrobia / Methanosarcinales / Methanosarcinaceae / Methanococcoides The genus Methanococcoides comprises four species, Methanococcoides methylutens, Methanococcoides burtonii, Methanococcoides alaskense, and Methanococcoides vulcani. Cells are irregular cocci, 0.5–3 μm in diameter, occurring singly or in pairs, and may be motile. Clumps of cells can also observed. Cells exhibit a blue‐green autofluorescence under UV illumination. The cell wall consists of a very thin protein S‐layer, approximately 10‐nm thick. Susceptible to lysis by hypotonic or detergent shock. Eurypsychrophilic to mesophilic. Strict...
Tipo: Text
Palavras-chave: Anaerobe; Psychrophile; Mesophile; Methyl compound reduction; Marine anoxic sediment; Deep‐sea mud volcano; Cold seeps.
Ano: 2020
URL: https://archimer.ifremer.fr/doc/00614/72595/74852.pdf

Methanogenic diversity and activity in hypersaline sediments of the centre of the Napoli mud volcano, Eastern Mediterranean Sea
Provedor de dados: 5
Autores: Lazar, Cassandre Sara; Parkes, R. John; Cragg, Barry A.; L Haridon, Stephane; Toffin, Laurent.
Submarine mud volcanoes are a significant source of methane to the atmosphere. The Napoli mud volcano, situated in the brine-impacted Olimpi Area of the Eastern Mediterranean Sea, emits mainly biogenic methane particularly at the centre of the mud volcano. Temperature gradients support the suggestion that Napoli is a cold mud volcano with moderate fluid flow rates. Biogeochemical and molecular genetic analyses were carried out to assess the methanogenic activity rates, pathways and diversity in the hypersaline sediments of the centre of the Napoli mud volcano. Methylotrophic methanogenesis was the only significant methanogenic pathway in the shallow sediments (0-40 cm) but was also measured throughout the sediment core, confirming that methylotrophic...
Tipo: Text
Ano: 2011
URL: http://archimer.ifremer.fr/doc/00043/15426/18003.pdf

Presence of oxygen and aerobic communities from sea floor to basement in deep-sea sediments
Provedor de dados: 5
Autores: D'Hondt, Steven; Inagaki, Fumio; Zarikian, Carlos Alvarez; Abrams, Lewis J.; Dubois, Nathalie; Engelhardt, Tim; Evans, Helen; Ferdelman, Timothy; Gribsholt, Britta; Harris, Robert N.; Hoppie, Bryce W.; Hyun, Jung-ho; Kallmeyer, Jens; Kim, Jinwook; Lynch, Jill E.; Mckinley, Claire C.; Mitsunobu, Satoshi; Morono, Yuki; Murray, Richard W.; Pockalny, Robert; Sauvage, Justine; Shimono, Takaya; Shiraishi, Fumito; Smith, David C.; Smith-duque, Christopher E.; Spivack, Arthur J.; Steinsbu, Bjorn Olav; Suzuki, Yohey; Szpak, Michal; Toffin, Laurent; Uramoto, Goichiro; Yamaguchi, Yasuhiko T.; Zhang, Guo-liang; Zhang, Xiao-hua; Ziebis, Wiebke.
The depth of oxygen penetration into marine sediments differs considerably from one region to another. In areas with high rates of microbial respiration, O2 penetrates only millimetres to centimetres into the sediments, but active anaerobic microbial communities are present in sediments hundreds of metres or more below the sea floor. In areas with low sedimentary respiration, O2 penetrates much deeper but the depth to which microbial communities persist was previously unknown. The sediments underlying the South Pacific Gyre exhibit extremely low areal rates of respiration. Here we show that, in this region, microbial cells and aerobic respiration persist through the entire sediment sequence to depths of at least 75 metres below sea floor. Based on the...
Tipo: Text
Ano: 2015
URL: https://archimer.ifremer.fr/doc/00255/36658/35265.pdf

Simultaneous analysis of microbial identity and function using NanoSIMS
Provedor de dados: 5
Autores: Li, T; Wu, T; Mazeas, L; Toffin, Laurent; Guerquin Kern, J; Leblon, G; Bouchez, T.
Identifying the function of uncultured microbes in their environments today remains one of the main challenges for microbial ecologists. In this article, we describe a new method allowing simultaneous analysis of microbial identity and function. This method is based on the visualization of oligonucleotide probe-conferred hybridization signal in single microbial cells and isotopic measurement using high-resolution ion microprobe (NanoSIMS). In order to characterize the potential of the method, an oligonucleotide containing iodized cytidine was hybridized on fixed cells of Escherichia coli cultured on media containing different levels of C-13 or N-15. Iodine signals could clearly be localized on targeted cells and the isotopic enrichment could be monitored...
Tipo: Text
Ano: 2008
URL: http://archimer.ifremer.fr/doc/2008/publication-4553.pdf

Methanogenic activity and diversity in the centre of the Amsterdam Mud Volcano, Eastern Mediterranean Sea
Provedor de dados: 5
Autores: Lazar, Cassandre; Parkes, R. John; Cragg, Barry A.; L'Haridon, Stephane; Toffin, Laurent.
Marine mud volcanoes are geological structures emitting large amounts of methane from their active centres. The Amsterdam mud volcano (AMV), located in the Anaximander Mountains south of Turkey, is characterized by intense active methane seepage produced in part by methanogens. To date, information about the diversity or the metabolic pathways used by the methanogens in active centres of marine mud volcanoes is limited. 14C-radiotracer measurements showed that methylamines/methanol, H2/CO2 and acetate were used for methanogenesis in the AMV. Methylotrophic methanogenesis was measured all along the sediment core, Methanosarcinales affiliated sequences were detected using archaeal 16S PCR-DGGE and mcrA gene libraries, and enrichments of methanogens showed...
Tipo: Text
Palavras-chave: Methanogenesis; McrA; Archaea.
Ano: 2012
URL: http://archimer.ifremer.fr/doc/00087/19795/17538.pdf

Marinilactibacillus piezotolerans sp nov., a novel marine lactic acid bacterium isolated from deep sub-seafloor sediment of the Nankai Trough
Provedor de dados: 5
Autores: Toffin, Laurent; Zink, Klaus; Kato, Chiaki; Pignet, Patricia; Bidault, Adeline; Bienvenu, Nadège; Birrien, Jean-louis; Prieur, Daniel.
A piezotolerant, mesophilic, marine lactic acid bacterium (strain LT20(T)) was isolated from a deep sub-seafloor sediment core collected at Nankai Trough, off the coast of Japan. Cells were Gram-positive, rod-shaped, non-sporulating and non-motile. The NaGl concentration range for growth was 0-120 gl(-1), with the optimum at 10-20 g l(-1). The temperature range for growth at PH 7.0 was 4-50 degreesC, with the optimum at 37-40 degreesC. The optimum pH for growth was 7.0-8.0. The optimum pressure for growth was 0.1 MPa with tolerance up to 30 MPa. The main cellular phospholipids were phosphatidylglycerols (25 %), diphosphatidylglycerols (34 %) and a group of compounds tentatively identified as ammonium-containing phosphatidylserines (32 %);...
Tipo: Text
Palavras-chave: Phylogeny; Biochemistry; Microbiology; Thermophilic bacteria; Deep sub seafloor sediment.
Ano: 2005
URL: http://archimer.ifremer.fr/doc/2005/publication-592.pdf

Shewanella profunda sp nov., isolated from deep marine sediment of the Nankai Trough
Provedor de dados: 5
Autores: Toffin, Laurent; Bidault, Adeline; Pignet, Patricia; Tindall, Brian; Slobodkin, Alexander; Kato, Chiaki; Prieur, Daniel.
A novel piezotolerant, mesophilic, facultatively anaerobic, organotrophic, polarly flagellated bacterium (strain LT13a(T)) was isolated from a deep sediment layer in the Nankai Trough (Leg 190, Ocean Drilling Program) off the coast of Japan. This organism used a wide range of organic substrates as sole carbon and energy sources: pyruvate, glutamate, succinate, fumarate, lactate, citrate, peptone and tryptone. Oxygen, nitrate, fumarate, ferric iron and cystine were used as electron acceptors. Maximal growth rates were observed at a hydrostatic pressure of 10 MPa. Hydrostatic pressure for growth was in the range 0.1-50 MPa. Predominant cellular fatty acids were 16:1 omega7c, 15: 0 iso, 16: 0 and 13: 0 iso. The G + C content of the DNA was 44.9 mol%. On the...
Tipo: Text
Palavras-chave: Phylogeny; Bacteria; Microbiology; Deep sediment layer.
Ano: 2004
URL: http://archimer.ifremer.fr/doc/2004/publication-590.pdf

Evidence of active methanogen communities in shallow sediments of the Sonora Margin cold seeps
Provedor de dados: 5
Autores: Vigneron, Adrien; L Haridon, Stephane; Godfroy, Anne; Roussel, Erwan; Cragg, Barry A.; Parkes, R. John; Toffin, Laurent.
In the Sonora Margin cold seep ecosystems (Gulf of California), sediments underlying microbial mats harbor high biogenic methane concentrations, fueling various microbial communities, such as abundant lineages of anaerobic methanotrophs (ANME). However, the biodiversity, distribution, and metabolism of the microorganisms producing this methane remain poorly understood. In this study, measurements of methanogenesis using radiolabeled dimethylamine, bicarbonate, and acetate showed that biogenic methane production in these sediments was mainly dominated by methylotrophic methanogenesis, while the proportion of autotrophic methanogenesis increased with depth. Congruently, methane production and methanogenic Archaea were detected in culture enrichments amended...
Tipo: Text
Ano: 2015
URL: http://archimer.ifremer.fr/doc/00256/36737/35338.pdf

Comparative Study of Guaymas Basin Microbiomes: Cold Seeps vs. Hydrothermal Vents Sediments
Provedor de dados: 5
Autores: Cruaud, Perrine; Vigneron, Adrien; Pignet, Patricia; Caprais, Jean-claude; Lesongeur, Francoise; Toffin, Laurent; Godfroy, Anne; Cambon-bonavita, Marie-anne.
In the Guaymas Basin, the presence at a few tens of kilometers of cold seeps and hydrothermal vents coupled with comparable sedimentary settings and depths offer a unique opportunity to assess and compare the microbial community composition of these deep-sea ecosystems. The microbial diversity in sediments from three cold seep and two hydrothermal vent assemblages were investigated using high-throughput 16S rRNA-sequencing. Numerous bacterial and archaeal lineages were detected in both cold seep and hydrothermal vent sediments. Various potential organic matter degraders (e.g., Chloroflexi, Atribacteria, MBG-D) and methane and sulfur cycling related microorganisms (e.g., ANME and methanogenic lineages, sulfate-reducing lineages) were detected in both...
Tipo: Text
Palavras-chave: Microbial diversity; Hydrothermal vents; Cold seeps; Ribotypes; Methane; Extreme environments.
Ano: 2017
URL: https://archimer.ifremer.fr/doc/00415/52640/53496.pdf

Archaeal Populations in Hypersaline Sediments Underlying Orange Microbial Mats in the Napoli Mud Volcano
Provedor de dados: 5
Autores: Lazar, Cassandre Sara; L'Haridon, Stephane; Pignet, Patricia; Toffin, Laurent.
Microbial mats in marine cold seeps are known to be associated with ascending sulfide- and methane-rich fluids. Hence, they could be visible indicators of anaerobic oxidation of methane (AOM) and methane cycling processes in underlying sediments. The Napoli mud volcano is situated in the Olimpi Area that lies on saline deposits; from there, brine fluids migrate upward to the seafloor. Sediments associated with a brine pool and microbial orange mats of the Napoli mud volcano were recovered during the Medeco cruise. Based on analysis of RNA-derived sequences, the "active" archaeal community was composed of many uncultured lineages, such as rice cluster V or marine benthic group D. Function methyl coenzyme M reductase (mcrA) genes were affiliated with the...
Tipo: Text
Ano: 2011
URL: http://archimer.ifremer.fr/doc/00035/14589/12126.pdf

Trace element systematics in cold seep carbonates and associated lipid compounds
Provedor de dados: 5
Autores: Wang, Xudong; Bayon, Germain; Kim, Jung-hyun; Lee, Dong-hun; Kim, Dahae; Guéguen, Bleuenn; Rouget, Marie-laure; Barrat, Jean-alix; Toffin, Laurent; Feng, Dong.
Seeping of methane-rich fluids at submarine cold seeps drives intense microbial activity and precipitation of authigenic carbonates. Some trace elements play an important role in the biogeochemical processes operating at cold seeps, especially as specific enzymatic co-factors related to methanogenesis and the anaerobic oxidation of methane (AOM). However, it is unclear whether microbial trace metal utilization can be traced by the geochemical composition of seep carbonates. In this study, we analyzed a series of authigenic carbonate samples recovered from various seep settings worldwide and report for the first time trace element concentrations for total lipid fractions, combined with biomarker analyses and determination of elemental abundances in...
Tipo: Text
Palavras-chave: Seep carbonate; Lipid compounds; Trace elements; Tungsten; Nickel; Cobalt; Molybdenum.
Ano: 2019
URL: https://archimer.ifremer.fr/doc/00511/62311/66562.pdf

Microbial communities associated with benthic faunal assemblages at cold seep sediments of the Sonora Margin, Guaymas Basin
Provedor de dados: 5
Autores: Cruaud, Perrine; Vigneron, Adrien; Pignet, Patricia; Caprais, Jean-claude; Lesongeur, Francoise; Toffin, Laurent; Godfroy, Anne; Cambon-bonavita, Marie-anne.
The Sonora Margin cold seeps present a seafloor mosaic pattern consisting of different faunal assemblages and microbial mats. To better understand if sedimentary microbial communities reflect this patchy distribution, all major habitats were investigated using four complementary approaches: 16S rRNA gene sequence 454 pyrosequencing, quantitative polymerase chain reaction, fluorescence in situ hybridization and geochemistry analyses. This study reveals that sediments populated by different surface assemblages show distinct porewater geochemistry features and are associated with distinct microbial communities. In the sediments underlying the microbial mat and the surrounding macrofauna, microbial communities were dominated by anaerobic methane oxidizers...
Tipo: Text
Palavras-chave: Microbial communities; Pyrosequencing; MBG-D; ANME; Faunal assemblages; Vesicomyidae; Siboglinidae; Microbial mat.
Ano: 2015
URL: https://archimer.ifremer.fr/doc/00288/39889/38434.pdf

Complete Genome Sequence of the Halophilic Methylotrophic Methanogen Archaeon     Methanohalophilus portucalensis     Strain FDF-1     T
Provedor de dados: 5
Autores: L'Haridon, Stephane; Corre, Erwan; Guan, Yue; Vinu, Manikandan; La Cono, Violetta; Yakimov, Michail; Stingl, Ulrich; Toffin, Laurent; Jebbar, Mohamed.
We report here the complete genome sequence (2.08 Mb) of Methanohalophilus portucalensis strain FDF-1T, a halophilic methylotrophic methanogen isolated from the sediment of a saltern in Figeria da Foz, Portugal. The average nucleotide identity and DNA-DNA hybridization analyses show that Methanohalophilus mahii, M. halophilus, and M. portucalensis are three different species within the Methanosarcinaceae family.
Tipo: Text
Ano: 2018
URL: https://archimer.ifremer.fr/doc/00420/53138/54102.pdf

Bacterial communities and syntrophic associations involved in anaerobic oxidation of methane process of the Sonora Margin cold seeps, Guaymas Basin
Provedor de dados: 5
Autores: Vigneron, Adrien; Cruaud, Perrine; Pignet, Patricia; Caprais, Jean-claude; Gayet, Nicolas; Cambon-bonavita, Marie-anne; Godfroy, Anne; Toffin, Laurent.
The Sonora Margin cold seeps present on the seafloor a patchiness pattern of white microbial mats surrounded by polychaete and gastropod beds. These surface assemblages are fuelled by abundant organic inputs sedimenting from the water column and upward-flowing seep fluids. Elevated microbial density was observed in the underlying sediments. A previous study on the same samples identified anaerobic oxidation of methane (AOM) as the potential dominant archaeal process in these Sonora Margin sediments, probably catalysed by three clades of archaeal anaerobic methanotrophs (ANME-1, ANME-2 and ANME-3) associated with bacterial syntrophs. In this study, molecular surveys and microscopic observations investigating the diversity of Bacteria involved in AOM...
Tipo: Text
Ano: 2014
URL: http://archimer.ifremer.fr/doc/00168/27921/27279.pdf

Complete Genome Sequence of   Methanohalophilus halophilus   DSM 3094   T   , Isolated from a Cyanobacterial Mat and Bottom Deposits at Hamelin Pool, Shark Bay, Northwestern Australia
Provedor de dados: 5
Autores: L’haridon, Stéphane; Corre, Erwan; Guan, Yue; Vinu, Manikandan; La Cono, Violetta; Yakimov, Mickail; Stingl, Ulrich; Toffin, Laurent; Jebbar, Mohamed.
The complete genome sequence of Methanohalophilus halophilus DSM 3094T, a member of the Methanosarcinaceae family and the Methanosarcianales order, consists of 2,022,959 bp in one contig and contains 2,137 predicted genes. The genome is consistent with a halophilic methylotrophic anaerobic lifestyle, including the methylotrophic and CO2-H2 methanogensis pathways.
Tipo: Text
Ano: 2017
URL: https://archimer.ifremer.fr/doc/00372/48351/48523.pdf