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| Registros recuperados: 72 | |
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| BASSO, M. F.; LOURENCO-TESSUTTI, I. T.; MENDES, R. A. G.; PINTO, C. E. M.; BOURNAUD, C.; GILLET, F.-X.; TOGAWA, R. C.; MACEDO, L. L. P. de; ENGLER, J. d A.; GROSSI-DE-SA, M. F.. |
| Tipo: Artigo de periódico |
Palavras-chave: Nematode reproduction; Meloidogyne Incognita. |
| Ano: 2020 |
URL: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1122921 |
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| MICHEREFF, M. F. F.; GRYNBERG, P.; TOGAWA, R. C.; COSTA, M. M. do C.; LAUMANN, R. A.; ZHOU, J.-J.; SCHIMMELPFENG, P. H. C.; BORGES, M.; PICKETT, J. A.; BIRKETT, M. A.; MORAES, M. C. B.. |
| Maria Carolina Blassioli-Moraes. |
| Tipo: Artigo de periódico |
Palavras-chave: Plant-plant communication; Plant defence; Plant genotypes; Volatiles compounds; Spodoptera Frugiperda; Natural enemies. |
| Ano: 2021 |
URL: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1131742 |
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| GUIMARAES, P. M.; GUIMARAES, L. A.; MORGANTE, C. V.; SILVA JUNIOR, O. B.; ARAUJO, A. C. G.; MARTINS, A. C. Q.; SARAIVA, M. A. P.; OLIVEIRA, T. N.; TOGAWA, R. C.; LEAL-BERTIOLI, S. C. M.; BERTIOLI, D. J.; BRASILEIRO, A. C. M.. |
| Wild peanut relatives (Arachis spp.) are genetically diverse and were adapted to a range of environments during the evolution course, constituting an important source of allele diver-sity for resistance to biotic and abiotic stresses. The wild diploid A.stenosperma harbors high levels of resistance to a variety of pathogens, including the root-knot nematode (RKN)Meloidogyne arenaria through the onset of the Hypersensitive Response (HR). In order to identify genes and regulators triggering this defense response, a comprehensive root tran-scriptome analysis during the first stages of this incompatible interaction was conducted using Illumina Hi-Seq. Overall, eight cDNA libraries were produced generating 28.2 GB, which were de novo assembled into 44,132... |
| Tipo: Artigo de periódico |
Palavras-chave: Diplóide selvagem; Nematóide das galhas; Gene regulador; Planta resistente; Melhoramento de planta; Peanut; Arachis spp; Peanut relatives.; Arachis Hypogaea.. |
| Ano: 2015 |
URL: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1035460 |
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| GUIMARAES, P. M.; GUIMARAES, L. A.; MORGANTE, C. V.; SILVA JUNIOR, O. B.; ARAUJO, A. C. G.; MARTINS, A. C. Q.; SARAIVA, M. A. P.; OLIVEIRA, T. N.; TOGAWA, R. C.; LEAL-BERTIOLI, S. C. M.; BERTIOLI, D. J.; BRASILEIRO, A. C. M.. |
| Tipo: Separatas |
Palavras-chave: Peanut.; Arachis Hypogaea.. |
| Ano: 2015 |
URL: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1030792 |
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| MIOTTO, Y. E.; TESSELE, C.; CZERMAINSKI, A. B. C.; PORTO, D. D.; FALAVIGNA, V. da S.; SARTOR, T.; CATTANI, A. M.; DELATORRE, C. A.; ALENCAR, S. A. de; SILVA JUNIOR, O. B. da; TOGAWA, R. C.; COSTA, M. M. do C.; PAPPAS JÚNIOR, G. J.; GRYNBERG, P.; OLIVEIRA, P. R. D. de; KVITSCHAL, M. V.; DENARDI, F.; BUFFON, V.; REVERS, L. F.. |
| Tipo: Separatas |
Palavras-chave: Bud dormancy; Linkage mapping; MdoFLC; MdoICE1; MdoPRE1; Apples; Chilling requirement. |
| Ano: 2019 |
URL: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1108014 |
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| MIOTTO, Y. E.; TESSELE, C.; CZERMAINSKI, A. B. C.; PORTO, D. D.; FALAVIGNA, V. da S.; SARTOR, T.; CATTANI, A. M.; DELATORRE, C. A.; ALENCAR, S. A. de; SILVA JUNIOR, O. B. da; TOGAWA, R. C.; COSTA, M. M. do C.; PAPPAS JÚNIOR, G. J.; GRYNBERG, P.; OLIVEIRA, P. R. D. de; KVITSCHAL, M. V.; DENARDI, F.; BUFFON, V.; REVERS, L. F.. |
| Chilling requirement (CR) for bud dormancy completion determines the time of bud break in apple (Malus × domestica Borkh.). The molecular control of bud dormancy is highly heritable, suggesting a strong genetic control of the trait. An available Infinium II SNP platform for genotyping containing 8,788 single nucleotide polymorphic markers was employed, and linkage maps were constructed in a F1 cross from the low CR M13/91 and the moderate CR cv. Fred Hough. These maps were used to identify quantitative trait loci (QTL) for bud break date as a trait related to dormancy release. A major QTL for bud break was detected at the beginning of linkage group 9 (LG9). This QTL remained stable during seven seasons in two different growing sites. To increase mapping... |
| Tipo: Artigo de periódico |
Palavras-chave: Bud dormancy; Linkage mapping; MdoFLC; MdoICE1; MdoPRE1; Apples; Chilling requirement. |
| Ano: 2019 |
URL: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1109789 |
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| NESHICH, G.; TOGAWA, R. C.; MANCINI, A. L.; FALCAO, P. R. K.; YAMAGISHI, M. E. B.; PAPPAS JUNIOR, G.; TORRES, W. V.; CAMPOS, T. F. e; FERREIRA, L. L.; LUNA, F. M.; OLIVEIRA, A. G.; MIURA, R. T.; INOUE, M. K.; HORITA, L. G.; SOUZA, D. F. de; DOMINIQUINI, F.; ÁLVARO, A.; LIMA, C. S.; OGAWA, F. O.; GOMES, G. B.; PALANDRANI, J. F.; SANTOS, G. F. dos; FREITAS, E. M. de; MATTIUZ, A. R.; COSTA, I. C.; ALMEIDA, C. L. de; SOUZA, S.; BAUDET, C.; HIGA, R. H.. |
| Sting Millennium suite intrinsics. SMS organization. Sting Millennium Modes. Sting Millennium Modules. Millennium Features. Example of Sting Millennium Application. |
| Tipo: Artigo de periódico |
Palavras-chave: Sting; Base de dados de proteinas.; Estrutura de proteína; Proteina.; Protein structure; Genetic databases; Databases.. |
| Ano: 2003 |
URL: http://www.alice.cnptia.embrapa.br/alice/handle/doc/8858 |
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| HIGA, R. H.; TOGAWA, R. C.; MONTAGNER, A. J.; PALANDRANI, J. C. F.; OKIMOTO, I. K. S.; FALCÃO, P. R. K.; YAMAGISHI, M. E. B.; MANCINI, A. L.; NESHICH, G.. |
| This article is intended to show how Sting Millennium Suite of programs can be useful in the study of protein structure and analysis of its function, emphasizing recent improvement introduced to SMS. The program has extensive built-in instructions and detailed easy-to-use help which user is invited to consult before and during SMS use. |
| Tipo: Artigo de periódico |
Palavras-chave: Sting Millennium Suite; Bioinformática.; Bioinformatics; Computer software.. |
| Ano: 2004 |
URL: http://www.alice.cnptia.embrapa.br/alice/handle/doc/9093 |
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| FONSECA, F. C. de A.; FIRMINO, A. A. P.; MACEDO. L. L. P. de; COELHO, R. R.; SOUSA JÚNIOR, J. D. A. de; SILVA JUNIOR, O. B.; TOGAWA, R. C.; PAPPAS JUNIOR, G. J.; GÓIS, L. A. B. de; SILVA, M. C. M. da; SA, M. F. G. de. |
| Sugarcane is a widely cultivated plant that serves primarily as a source of sugar and ethanol. Its annual yield can be significantly reduced by the action of several insect pests including the sugarcane giant borer (Telchin licus licus), a lepidopteran that presents a long life cycle and which efforts to control it using pesticides have been inefficient. Although its economical relevance, only a few DNA sequences are available for this species in the Gen-Bank. Pyrosequencing technology was used to investigate the transcriptome of several developmental stages of the insect. To maximize transcript diversity, a pool of total RNA was extracted from whole body insects and used to construct a normalized cDNA database. Sequencing produced over 650,000 reads,... |
| Tipo: Separatas |
Palavras-chave: Broca Gigante; Controle Biológico; Praga.. |
| Ano: 2015 |
URL: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1023363 |
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| NESHICH, G.; BORRO, L. C.; HIGA, R. H.; KUSER, P. R.; YAMAGISHI, M. E. B.; FRANCO, E. H.; KRAUCHENCO, J. N.; FILETO, R.; RIBEIRO, A. A.; BEZERRA, G. B. P.; VELLUDO, T. M.; JIMENEZ, T. S.; FURUKAWA, N.; TESHIMA, H.; KITAJIMA, K.; BAVA, A.; SARAI, A.; TOGAWA, R. C.; MANCINI, A. L.. |
| Diamond STING is a new version of the STING suite of programs for a comprehensive analysis of a relationship between protein sequence, structure, function and stability. We have added a number of new functionalities by both providing more structure parameters to the STING Database and by improving/ expanding the Interface for enhanced data handling. The integration among the STING components has also been Improved. A new key feature is the ability of the STING server to handle local files containing protein structures (either modeled or not yet deposited to the Protein Data Bank) so that they can be used by the principal STING components: JavaProtein Dossier (JPD) and STING Report. The current capabilities of the new STING version and a couple of... |
| Tipo: Artigo de periódico |
Palavras-chave: Estrutura de proteína; Diamond STING; STING; JavaProtein Dossier.; Proteina.; Protein structure.. |
| Ano: 2005 |
URL: http://www.alice.cnptia.embrapa.br/alice/handle/doc/9085 |
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| MYBURG, A. A.; GRATTAPAGLIA, D.; TUSKAN, G. A.; HELLSTEN, U.; HAYES, R. D.; GRIMWOOD, J.; JENKINS, J.; LINDQUIST, E.; BAUER, D.; GOODSTEIN, D. M.; DUBCHAK, I.; POLIAKOV, A.; MIZRACHI, E.; KULLAN, A. R. K.; HUSSEY, S. G.; PINARD, D.; MERWE, K. van der; SINGH, P.; JAARSVELD, I. van; SILVA JUNIOR, O. B.; TOGAWA, R. C.; PAPPAS, M. R.; FARIA, D. A.; SANSALONI, C. P.; PETROLI, C. D.; YANG, X.; RANJAN, P.; TSCHAPLINSKI, T. J.; YE, C.-Y.; LI, T.; STERCK, L.; VANNESTE, K.; MURAT, F.; SOLER, M.; SAN CLEMENTE, H.; SAIDI, N.; CASSAN-WANG, H.; DUNAND, C.; HEFER, C. A.; BORNBERG-BAUER, E.; KERSTING, A. R.; VINING, K.; AMARASINGHE, V.; RANIK, M.; NAITHANI, S.; ELSER, J.; BOYD, A. E.; LISTON, A.; SPATAFORA, J. W.; DHARMWARDHANA, P.; RAJA, R.; SULLIVAN, C.; ROMANEL, E.; ALVES-FERREIRA, M.; KULHEIM, C.; FOLEY, W.; CAROCHA, V.; PAIVA, J.; KUDRNA, D.; BROMMONSCHENKEL, S. H.; PASQUALI, G.; BYRNE, M.; RIGAULT, P.; SPOKEVICIUS, A.; JONES, R. C.; STEANE, D. A.; VAILLANCOURT, R. E.; POTTS, B. M.; JOUBERT, F.; BARRY, K.; PAPPAS JUNIOR, G. J.; STRAUSS, S. H.; JAISWAL, P.; GRIMA-PETTENATI, J.; SALSE, J.; PEER, Y. van de; ROKHSAR, D. S.; SCHMUTZ, J.. |
| Tipo: Separatas |
Palavras-chave: Secondary metabolism; Genome evolution; Phylogenomics.; Eucalyptus Grandis.; Biofuels.. |
| Ano: 2014 |
URL: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1006198 |
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| CRAVEIRO, S. R.; TOGAWA, R. C.; INGLIS, P. W.; GRYNBERG, P.; MELO, F. L.; RIBEIRO, Z. M. de A.; RIBEIRO, B. M.; BÁO, S. N.; CASTRO, M. E. B. de. |
| Background: Pseudoplusia includens single nucleopolyhedrovirus (PsinSNPV-IE) is a baculovirus recently identified in our laboratory, with high pathogenicity to the soybean looper, Chrysodeixis includens (Lepidoptera: Noctuidae) (Walker, 1858). In Brazil, the C. includens caterpillar is an emerging pest and has caused significant losses in soybean and cotton crops. The PsinSNPV genome was determined and the phylogeny of the p26 gene within the family Baculoviridae was investigated. Results: The complete genome of PsinSNPV was sequenced (Roche 454 GS FLX ? Titanium platform), annotated and compared with other Alphabaculoviruses, displaying a genome apparently different from other baculoviruses so far sequenced. The circular double-stranded DNA genome is... |
| Tipo: Separatas |
Palavras-chave: Insiticida biológico.; Baculovirus; Praga; Pseudoplusia Includens.. |
| Ano: 2015 |
URL: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1029685 |
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| NESHICH, G.; MAZONI, I.; OLIVEIRA, S. R. M.; YAMAGISHI, M. E. B.; KUSER-FALCÃO, P. R.; BORRO, L. C.; MORITA, D. U.; SOUZA, K. R. R.; ALMEIDA, G. V.; RODRIGUES, D. N.; JARDINE, J. G.; TOGAWA, R. C.; MANCINI, A. L.; HIGA, R. H.; CRUZ, S. A. B.; VIEIRA, F. D.; SANTOS, E. H.; MELO, R. C.; SANTORO, M. M.. |
| ABSTRACT. Star STING is the latest version of the STING suite of programs and corresponding database. We report on five important aspects of this package that have acquired some new characteristics, designed to add key advantages to the whole suite: 1) availability for most popular platforms and browsers, 2) introduction of the STING_DB quality assessment, 3) improvement in algorithms for calculation of three STING parameters, 4) introduction of five new STING modules, and 5) expansion of the existing modules. Star STING is freely accessible at: http://sms.cbi.cnptia.embrapa.br/SMS/, http://trantor.bioc.columbia.edu/SMS, http://www.es.embnet.org/SMS/, http://gibk26.bse.kyutech.ac.jp/SMS/ and http://www.ar.embnet.org/SMS. |
| Tipo: Artigo de periódico |
Palavras-chave: Bioinformática; Estrutura de proteina; Protein structure analysis; Sting; Per-residue structure descriptors; Topology similarity; Structure summaries; Bioinformatics; Protein structure. |
| Ano: 2006 |
URL: http://www.alice.cnptia.embrapa.br/alice/handle/doc/9170 |
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| BENEVENTI, M. A.; SILVA JUNIOR, O. B. da; SÁ, M. E. L. de; FIRMINO, A. A. P.; AMORIM, R. M. S. de; ALBUQUERQUE, E. V. S.; SILVA, M. C. M. da; SILVA, J. P. da; CAMPOS, M. de A.; LOPES, M. J. C.; TOGAWA, R. C.; PAPPAS JÚNIOR, G. J.; GROSSI DE SÁ, M. F.. |
| Tipo: Separatas |
Palavras-chave: Root-knot nematode; Pyrosequencing; Plant–pathogen interaction; Hormone.; Glycine Max; Transcriptome. |
| Ano: 2013 |
URL: http://www.alice.cnptia.embrapa.br/alice/handle/doc/979805 |
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| Registros recuperados: 72 | |
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