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Mapping of QTL for total spikelet number per spike on chromosome 2D in wheat using a high-density genetic map Genet. Mol. Biol.
Deng,Mei; Wu,Fangkun; Zhou,Wanlin; Li,Jing; Shi,Haoran; Wang,Zhiqiang; Lin,Yu; Yang,Xilan; Wei,Yuming; Zheng,Youliang; Liu,Yaxi.
Abstract Total spikelet number per spike (TSS) is one of the key components of grain yield in wheat. Chromosome (chr.) 2D contains numerous genes that control TSS. In this study, we evaluated 138 F8 recombinant inbred lines (RILs) derived from an F2 population of a synthetic hexaploid wheat line (SHW-L1) and a common wheat cultivar (Chuanmai 32) for TSS in six different environments. To identify quantitative trait loci (QTL) for TSS, we constructed an integrated high-density genetic map of chr. 2D containing two simple sequence repeats, 35 diversity array technology markers, and 143 single nucleotide polymorphisms. We identified three stable QTL for TSS that individually explained 9.7–19.2% of the phenotypic variation and predicted 23 putative candidate...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Recombinant inbred line; Synthetic hexaploid wheat; Quantitative trait locus; Total spikelet number per spike.
Ano: 2019 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572019000400603
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Genome-wide association study of pre-harvest sprouting resistance in Chinese wheat founder parents Genet. Mol. Biol.
Lin,Yu; Liu,Shihang; Liu,Yaxi; Liu,Yujiao; Chen,Guoyue; Xu,Jie; Deng,Mei; Jiang,Qiantao; Wei,Yuming; Lu,Yanli; Zheng,Youliang.
Abstract Pre-harvest sprouting (PHS) is a major abiotic factor affecting grain weight and quality, and is caused by an early break in seed dormancy. Association mapping (AM) is used to detect correlations between phenotypes and genotypes based on linkage disequilibrium (LD) in wheat breeding programs. We evaluated seed dormancy in 80 Chinese wheat founder parents in five environments and performed a genome-wide association study using 6,057 markers, including 93 simple sequence repeat (SSR), 1,472 diversity array technology (DArT), and 4,492 single nucleotide polymorphism (SNP) markers. The general linear model (GLM) and the mixed linear model (MLM) were used in this study, and two significant markers (tPt-7980 and wPt-6457) were identified. Both markers...
Tipo: Info:eu-repo/semantics/article Palavras-chave: General linear model; Linkage disequilibrium; Marker-trait associations; Mixed linear model; Seed dormancy.
Ano: 2017 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572017000400620
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Genome-wide association study of drought-related resistance traits in Aegilops tauschii Genet. Mol. Biol.
Qin,Peng; Lin,Yu; Hu,Yaodong; Liu,Kun; Mao,Shuangshuang; Li,Zhanyi; Wang,Jirui; Liu,Yaxi; Wei,Yuming; Zheng,Youliang.
Abstract The D-genome progenitor of wheat (Triticum aestivum), Aegilops tauschii, possesses numerous genes for resistance to abiotic stresses, including drought. Therefore, information on the genetic architecture of A. tauschii can aid the development of drought-resistant wheat varieties. Here, we evaluated 13 traits in 373 A. tauschii accessions grown under normal and polyethylene glycol-simulated drought stress conditions and performed a genome-wide association study using 7,185 single nucleotide polymorphism (SNP) markers. We identified 208 and 28 SNPs associated with all traits using the general linear model and mixed linear model, respectively, while both models detected 25 significant SNPs with genome-wide distribution. Public database searches...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Aegilops tauschii; Drought resistance; Genome-wide association study; Single nucleotide polymorphism; Wheat.
Ano: 2016 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572016000300398
Registros recuperados: 3
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