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| Registros recuperados: 18 | |
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| Rochelle-newall, Emma. J.; Winter, Christian; Barrón, Cristina; Borges, Alberto V.; Duarte, Carlos M.; Elliott, Mike; Frankignoulle, Michel; Gazeau, Frederic; Middelburg, Jack J.; Pizay, Marie-dominique; Gattuso, Jean-pierre. |
| Knowing the metabolic balance of an ecosystem is of utmost importance in determining whether the system is a net source or net sink of carbon dioxide to the atmosphere. However, obtaining these estimates often demands significant amounts of time and manpower. Here we present a simplified way to obtain an estimation of ecosystem metabolism. We used artificial neural networks (ANNs) to develop a mathematical model of the gross primary production to community respiration ratio (GPP:CR) based on input variables derived from three widely contrasting European coastal ecosystems (Scheldt Estuary, Randers Fjord, and Bay of Palma). Although very large gradients of nutrient concentration, light penetration, and organic-matter concentration exist across the sites,... |
| Tipo: Text |
Palavras-chave: Artificial neural networks; Coastal ecosystems; Metabolic balance; Primary production; Respiration. |
| Ano: 2007 |
URL: https://archimer.ifremer.fr/doc/00247/35857/34378.pdf |
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| Moalic, Yann; Desbruyeres, Daniel; Duarte, Carlos M.; Rozenfeld, Alejandro F.; Bachraty, Charleyne; Arnaud-haond, Sophie. |
| Defining biogeographic provinces to understand the history and evolution of communities associated with a given kind of ecosystem is challenging and usually requires a priori assumptions to be made. We applied network theory, a holistic and exploratory method, to the most complete database of faunal distribution available on oceanic hydrothermal vents, environments which support fragmented and unstable ecosystems, to infer the processes driving their worldwide biogeography. Besides the identification of robust provinces, the network topology allowed us to identify preferential pathways that had hitherto been overlooked. These pathways are consistent with the previously proposed hypothesis of a role of plate tectonics in the biogeographical history of... |
| Tipo: Text |
Palavras-chave: Biogeography; Deep sea ecology; Hydrothermal vents; Network analysis; Systems biology. |
| Ano: 2012 |
URL: http://archimer.ifremer.fr/doc/00063/17400/15164.pdf |
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| Garrabou, Joaquim; Gómez-gras, Daniel; Ledoux, Jean-baptiste; Linares, Cristina; Bensoussan, Nathaniel; López-sendino, Paula; Bazairi, Hocein; Espinosa, Free; Ramdani, Mohamed; Grimes, Samir; Benabdi, Mouloud; Souissi, Jamila Ben; Soufi, Emna; Khamassi, Faten; Ghanem, Raouia; Ocaña, Oscar; Ramos-esplà, Alfonso; Izquierdo, Andres; Anton, Irene; Rubio-portillo, Esther; Barbera, Carmen; Cebrian, Emma; Marbà, Nuria; Hendriks, Iris E.; Duarte, Carlos M.; Deudero, Salud; Díaz, David; Vázquez-luis, Maite; Alvarez, Elvira; Hereu, Bernat; Kersting, Diego K.; Gori, Andrea; Viladrich, Núria; Sartoretto, Stephane; Pairaud, Ivane; Ruitton, Sandrine; Pergent, Gérard; Pergent-martini, Christine; Rouanet, Elodie; Teixidó, Nuria; Gattuso, Jean-pierre; Fraschetti, Simonetta; Rivetti, Irene; Azzurro, Ernesto; Cerrano, Carlo; Ponti, Massimo; Turicchia, Eva; Bavestrello, Giorgio; Cattaneo-vietti, Riccardo; Bo, Marzia; Bertolino, Marco; Montefalcone, Monica; Chimienti, Giovanni; Grech, Daniele; Rilov, Gil; Tuney Kizilkaya, Inci; Kizilkaya, Zafer; Eda Topçu, Nur; Gerovasileiou, Vasilis; Sini, Maria; Bakran-petricioli, Tatjana; Kipson, Silvija; Harmelin, Jean G.. |
| Tipo: Text |
Palavras-chave: Climate change; Ocean warming; Marine heat wave impacts; Marine disease; Marine conservation and protection. |
| Ano: 2019 |
URL: https://archimer.ifremer.fr/doc/00592/70448/68557.pdf |
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| Arnaud-haond, Sophie; Marba, Nuria; Diaz-almela, Elena; Serrao, Ester A.; Duarte, Carlos M.. |
| The diversity-stability relationship is the subject of a long-standing debate in ecology, but the genetic component of diversity has seldom been explored. In this study, we analyzed the interplay between genetic diversity and demographic responses to environmental pressures. This analysis included 30 meadows formed by the Mediterranean endemic seagrass, Posidonia oceanica, showing a wide range of population dynamics ranging from a near equilibrium state to steep decline due to strong environmental pressures close to aquaculture installations. Our results show that sedimentation rates are much better predictors of mortality than clonal or genetic components. An unexpected positive trend was observed between genotypic diversity and mortality, along with a... |
| Tipo: Text |
Palavras-chave: Seagrass; Demography; Clonality; Genetic richness; Diversity-stability; Posidonia oceanica. |
| Ano: 2010 |
URL: http://archimer.ifremer.fr/doc/00006/11693/8498.pdf |
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| Regaudie-de-gioux, Aurore; Lasternas, Sébastien; Agustí, Susana; Duarte, Carlos M.. |
| Numerous studies have compared the rates of primary production using various techniques at specific locations and times. However, these comparisons are local and cannot be used to compare or scale rates of primary production using different methods across ocean basins or seasonal time scales. Here, we quantify the range in rates of primary production derived using different techniques and provide equations that allow conversions of estimates between different methods. We do so on the basis of a compilation of data on volumetric estimates of primary production rates concurrently estimated with at least two different methods. We observed that the comparison of estimates of marine phytoplankton primary production derived from different methods reveals very... |
| Tipo: Text |
Palavras-chave: Marine; Phytoplankton; GPP; Methods; Conversion. |
| Ano: 2014 |
URL: https://archimer.ifremer.fr/doc/00420/53120/54072.pdf |
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| Arnaud-haond, Sophie; Moalic, Yann; Hernandez-garcia, Emilio; Eguiluz, Victor M.; Alberto, Filipe; Serrao, Ester A.; Duarte, Carlos M.. |
| The recurrent lack of isolation by distance reported at regional scale in seagrass species was recently suggested to stem from stochastic events of large-scale dispersal. We explored the usefulness of phylogenetic information contained in microsatellite loci to test this hypothesis by using the Genetic Diversity Spectrum (GDS) on databases containing, respectively, 7 and 9 microsatellites genotypes for 1541 sampling units of Posidonia oceanica and 1647 of Cymodocea nodosa. The simultaneous increase of microsatellite and geographic distances that emerges reveals a coherent pattern of isolation by distance in contrast to the chaotic pattern previously described using allele frequencies, in particular, for the long-lived P. oceanica. These results suggest... |
| Tipo: Text |
Palavras-chave: Clonality; Genetic Diversity Spectrum; Genetic divergence; Microsatellites; Seagrass; Stepwise mutation. |
| Ano: 2014 |
URL: http://archimer.ifremer.fr/doc/00182/29292/27733.pdf |
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| Aires, Tania; Marba, Nuria; Cunha, Regina L.; Kendrick, Gary A.; Walker, Diana I.; Serrao, Ester A.; Duarte, Carlos M.; Arnaud-haond, Sophie. |
| Seagrasses are the structural species of one of the most important coastal ecosystems worldwide and support high levels of biodiversity and biomass production. Posidonia is one of the most ancient seagrass genera and displays a contrasting disjunct biogeographic pattern. It contains one single species in the Northern Hemisphere, P. oceanica, which is endemic to the Mediterranean Sea, and has up to 8 recognized taxa in the Southern Hemisphere, which in Australia are divided into 2 complexes, P. ostenfeldii and P. australis. A phylogeny based on a nuclear marker (rRNA-ITS) revealed an ancient split between the northern (i.e. Mediterranean) and southern (i.e. Australian) taxa, followed by a separation of the 2 recognized Australian complexes. However, the... |
| Tipo: Text |
Palavras-chave: Posidonia; Phylogeny; Low evolutionary rates; Ancient diversification. |
| Ano: 2011 |
URL: http://archimer.ifremer.fr/doc/00027/13798/10937.pdf |
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| Arnaud-haond, Sophie; Duarte, Carlos M.; Teixeira, Sara; Massa, Sonia Isabel; Terrados, Jorge; Nguyen Hong, Tri; Phan Nguyen, Hong; Serrao, Ester A.. |
| The widespread use of Agent Orange (a mixture of phenoxyl herbicides) over Southern Vietnam by US Forces led to the decimation of mangrove forests in the Mekong Delta. Mangrove trees Avicennia alba were sampled across the Mekong Delta; their age was assessed using models based on internode growth and samples were genotyped for 6 microsatellite loci. The evolution of genetic diversity over time elapsed since local extinction was reconstructed and compared with the genetic diversity of an unaffected population from Thailand, The results show that genetic diversity of the A. alba population is still increasing in the Mekong Delta 3 decades after the end of the Vietnam War, but is reaching an asymptotic level that is comparable to the adjacent non-affected... |
| Tipo: Text |
Palavras-chave: Agent Orange; Deforestation; Mangrove; Local extinction; Demographic recovery; Genetic recovery; Recolonization genetics. |
| Ano: 2009 |
URL: http://archimer.ifremer.fr/doc/2009/publication-6898.pdf |
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| Queiroz, Nuno; Humphries, Nicolas E.; Couto, Ana; Vedor, Marisa; Da Costa, Ivo; Sequeira, Ana M. M.; Mucientes, Gonzalo; Santos, Antonio M; Abascal, Francisco J.; Abercrombie, Debra L.; Abrantes, Katya; Acuna-marrero, David; Afonso, Andre S.; Afonso, Pedro; Anders, Darrell; Araujo, Gonzalo; Arauz, Randall; Bach, Pascal; Barnett, Adam; Bernal, Diego; Berumen, Michael L.; Lion, Sandra Bessudo; Bezerra, Natalia P. A.; Blaison, Antonin V.; Block, Barbara A.; Bond, Mark E.; Bonfil, Ramon; Bradford, Russell W.; Braun, Camrin D.; Brooks, Edward J.; Brooks, Annabelle; Brown, Judith; Bruce, Barry D.; Byrne, Michael E.; Campana, Steven E.; Carlisle, Aaron B.; Chapman, Demian D.; Chapple, Taylor K.; Chisholm, John; Clarke, Christopher R.; Clua, Eric G.; Cochran, Jesse E. M.; Crochelet, Estelle C.; Dagorn, Laurent; Daly, Ryan; Cortes, Daniel Devia; Doyle, Thomas K.; Drew, Michael; Duffy, Clinton A. J.; Erikson, Thor; Espinoza, Eduardo; Ferreira, Luciana C.; Ferretti, Francesco; Filmalter, John D.; Fischer, G. Chris; Fitzpatrick, Richard; Fontes, Jorge; Forget, Fabien; Fowler, Mark; Francis, Malcolm P.; Gallagher, Austin J.; Gennari, Enrico; Goldsworthy, Simon D.; Gollock, Matthew J.; Green, Jonathan R.; Gustafson, Johan A.; Guttridge, Tristan L.; Guzman, Hector M.; Hammerschlag, Neil; Harman, Luke; Hazin, Fabio H. V.; Heard, Matthew; Hearn, Alex R.; Holdsworth, John C.; Holmes, Bonnie J.; Howey, Lucy A.; Hoyos, Mauricio; Hueter, Robert E.; Hussey, Nigel E.; Huveneers, Charlie; Irion, Dylan T.; Jacoby, David M. P.; Jewell, Oliver J. D.; Johnson, Ryan; Jordan, Lance K. B.; Jorgensen, Salvador J.; Joyce, Warren; Daly, Clare A. Keating; Ketchum, James T.; Klimley, A. Peter; Kock, Alison A.; Koen, Pieter; Ladino, Felipe; Lana, Fernanda O.; Lea, James S. E.; Llewellyn, Fiona; Lyon, Warrick S.; Macdonnell, Anna; Macena, Bruno C. L.; Marshall, Heather; Mcallister, Jaime D.; Mcauley, Rory; Meyer, Michael A.; Morris, John J.; Nelson, Emily R.; Papastamatiou, Yannis P.; Patterson, Toby A.; Penaherrera-palma, Cesar; Pepperell, Julian G.; Pierce, Simon J.; Poisson, Francois; Quintero, Lina Maria; Richardson, Andrew J.; Rogers, Paul J.; Rohner, Christoph A.; Rowat, David R. L.; Samoilys, Melita; Semmens, Jayson M.; Sheaves, Marcus; Shillinger, George; Shivji, Mahmood; Singh, Sarika; Skomal, Gregory B.; Smale, Malcolm J.; Snyders, Laurenne B.; Soler, German; Soria, Marc; Stehfest, Kilian M.; Stevens, John D.; Thorrold, Simon R.; Tolotti, Mariana T.; Towner, Alison; Travassos, Paulo; Tyminski, John P.; Vandeperre, Frederic; Vaudo, Jeremy J.; Watanabe, Yuuki Y.; Weber, Sam B.; Wetherbee, Bradley M.; White, Timothy D.; Williams, Sean; Zarate, Patricia M.; Harcourt, Robert; Hays, Graeme C.; Meekan, Mark G.; Thums, Michele; Irigoien, Xabier; Eguiluz, Victor M.; Duarte, Carlos M.; Sousa, Lara L.; Simpson, Samantha J.; Southall, Emily J.; Sims, David W.. |
| Effective ocean management and the conservation of highly migratory species depend on resolving the overlap between animal movements and distributions, and fishing effort. However, this information is lacking at a global scale. Here we show, using a big-data approach that combines satellite-tracked movements of pelagic sharks and global fishing fleets, that 24% of the mean monthly space used by sharks falls under the footprint of pelagic longline fisheries. Space-use hotspots of commercially valuable sharks and of internationally protected species had the highest overlap with longlines (up to 76% and 64%, respectively), and were also associated with significant increases in fishing effort. We conclude that pelagic sharks have limited spatial refuge from... |
| Tipo: Text |
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| Ano: 2019 |
URL: https://archimer.ifremer.fr/doc/00575/68662/67587.pdf |
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| Arnaud-haond, Sophie; Duarte, Carlos M.; Diaz-almela, Elena; Marba, Nuria; Sintes, Tomas; Serrao, Ester A.. |
| The maximum size and age that clonal organisms can reach remains poorly known, although we do know that the largest natural clones can extend over hundreds or thousands of metres and potentially live for centuries. We made a review of findings to date, which reveal that the maximum clone age and size estimates reported in the literature are typically limited by the scale of sampling, and may grossly underestimate the maximum age and size of clonal organisms. A case study presented here shows the occurrence of clones of slow-growing marine angiosperm Posidonia oceanica at spatial scales ranging from metres to hundreds of kilometres, using microsatellites on 1544 sampling units from a total of 40 locations across the Mediterranean Sea. This analysis revealed... |
| Tipo: Text |
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| Ano: 2012 |
URL: http://archimer.ifremer.fr/doc/00076/18710/16283.pdf |
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| Aires, Tania; Serrao, Ester A.; Kendrick, Gary; Duarte, Carlos M.; Arnaud-haond, Sophie. |
| Biological invasions rank amongst the most deleterious components of global change inducing alterations from genes to ecosystems. The genetic characteristics of introduced pools of individuals greatly influence the capacity of introduced species to establish and expand. The recently demonstrated heritability of microbial communities associated to individual genotypes of primary producers makes them a potentially essential element of the evolution and adaptability of their hosts. Here, we characterized the bacterial communities associated to native and non-native populations of the marine green macroalga Caulerpa racemosa through pyrosequencing, and explored their potential role on the strikingly invasive trajectory of their host in the Mediterranean. The... |
| Tipo: Text |
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| Ano: 2013 |
URL: http://archimer.ifremer.fr/doc/00157/26791/24886.pdf |
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| Roberts, Callum M.; O'Leary, Bethan C.; Mccauley, Douglas J.; Cury, Philippe Maurice; Duarte, Carlos M.; Lubchenco, Jane; Pauly, Daniel; Saenz-arroyo, Andrea; Rashid Sumaila, Ussif; Wilson, Rod W.; Worm, Boris; Carlos Castilla, Juan. |
| Strong decreases in greenhouse gas emissions are required to meet the reduction trajectory resolved within the 2015 Paris Agreement. However, even these decreases will not avert serious stress and damage to life on Earth, and additional steps are needed to boost the resilience of ecosystems, safeguard their wildlife, and protect their capacity to supply vital goods and services. We discuss how well-managed marine reserves may help marine ecosystems and people adapt to five prominent impacts of climate change: acidification, sea-level rise, intensification of storms, shifts in species distribution, and decreased productivity and oxygen availability, as well as their cumulative effects. We explore the role of managed ecosystems in mitigating climate change... |
| Tipo: Text |
Palavras-chave: Ecological insurance; Marine protected areas; Nature-based solution; MPA; Global change. |
| Ano: 2017 |
URL: https://archimer.ifremer.fr/doc/00625/73712/76769.pdf |
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| Agusti, Susana; Martinez-ayala, Juan; Regaudie-de-gioux, Aurore; Duarte, Carlos M.. |
| Increased oligotrophication is expected for oligotrophic areas as a consequence of ocean warming, which reduces diffusive vertical nutrient supply due to strengthened stratification. Evidence of ocean oligotrophication has been, thus far, reported for the open ocean. Here we reported oligotrophication and associated changes in plankton community metabolism with warming in a pristine, oligotrophic Mediterranean coastal area (Cap Salines, Mallorca Island, Spain) during a 10 years time series. As a temperate area, there were seasonal patterns associated to changes in the broad temperature range (12.0.28.4.C), with a primary phytoplankton bloom in late winter and a secondary one in the fall. Community respiration (R) rates peaked during summers and showed... |
| Tipo: Text |
Palavras-chave: Oligotrophiocation; Mediterranean sea; Respiration; Net community production; Nutrients; Gross primary production; Warming; Chlorophyll. |
| Ano: 2017 |
URL: https://archimer.ifremer.fr/doc/00419/53091/54048.pdf |
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| De Los Santos, Carmen B.; Krause-jensen, Dorte; Alcoverro, Teresa; Marbà, Núria; Duarte, Carlos M.; Van Katwijk, Marieke M.; Pérez, Marta; Romero, Javier; Sánchez-lizaso, José L.; Roca, Guillem; Jankowska, Emilia; Pérez-lloréns, José Lucas; Fournier, Jerome; Montefalcone, Monica; Pergent, Gérard; Ruiz, Juan M.; Cabaço, Susana; Cook, Kevan; Wilkes, Robert J.; Moy, Frithjof E.; Trayter, Gregori Muñoz-ramos; Arañó, Xavier Seglar; De Jong, Dick J.; Fernández-torquemada, Yolanda; Auby, Isabelle; Vergara, Juan J.; Santos, Rui. |
| Seagrass meadows, key ecosystems supporting fisheries, carbon sequestration and coastal protection, are globally threatened. In Europe, loss and recovery of seagrasses are reported, but the changes in extent and density at the continental scale remain unclear. Here we collate assessments of changes from 1869 to 2016 and show that 1/3 of European seagrass area was lost due to disease, deteriorated water quality, and coastal development, with losses peaking in the 1970s and 1980s. Since then, loss rates slowed down for most of the species and fast-growing species recovered in some locations, making the net rate of change in seagrass area experience a reversal in the 2000s, while density metrics improved or remained stable in most sites. Our results... |
| Tipo: Text |
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| Ano: 2019 |
URL: https://archimer.ifremer.fr/doc/00508/61966/66058.pdf |
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| Friedman, Whitney R.; Halpern, Benjamin S.; Mcleod, Elizabeth; Beck, Michael W.; Duarte, Carlos M.; Kappel, Carrie, V; Levine, Arielle; Sluka, Robert D.; Adler, Steven; O'Hara, Casey C.; Sterling, Eleanor J.; Tapia-lewin, Sebastian; Losada, Inigo J.; Mcclanahan, Tim R.; Pendleton, Linwood; Spring, Margaret; Toomey, James P.; Weiss, Kenneth R.; Possingham, Hugh P.; Montambault, Jensen R.. |
| The health of coastal human communities and marine ecosystems are at risk from a host of anthropogenic stressors, in particular, climate change. Because ecological health and human well-being are inextricably connected, effective and positive responses to current risks require multidisciplinary solutions. Yet, the complexity of coupled social-ecological systems has left many potential solutions unidentified or insufficiently explored. The urgent need to achieve positive social and ecological outcomes across local and global scales necessitates rapid and targeted multidisciplinary research to identify solutions that have the greatest chance of promoting benefits for both people and nature. To address these challenges, we conducted a forecasting exercise... |
| Tipo: Text |
Palavras-chave: Marine sustainability; Human health; Social equity; Climate change; Priority research; Sustainable development goals. |
| Ano: 2020 |
URL: https://archimer.ifremer.fr/doc/00607/71926/70618.pdf |
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| Aires, Tania; Marba, Nuria; Serrao, Ester A.; Duarte, Carlos M.; Arnaud-haond, Sophie. |
| Molecular analyses of bacteria associated with photosynthetic organisms are often confounded by coamplification of the chloroplastidial 16S rDNA with the targeted bacterial 16S rDNA. This major problem has hampered progress in the characterization of bacterial communities associated to photosynthetic organisms and has limited the full realization of the potential offered by the last generation of metagenomics approaches. A simple and inexpensive method is presented, based on ethanol and bleach treatments prior to extraction, to efficiently discard a great part of chloroplastidial DNA without affecting the characterization of bacterial communities through pyrosequencing. Its effectiveness for the description of bacterial lineages associated to the green... |
| Tipo: Text |
Palavras-chave: 16S; Chloroplasts; Elimination; Green algae; Metagenomics. |
| Ano: 2012 |
URL: http://archimer.ifremer.fr/doc/00076/18739/16464.pdf |
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| Arrieta, Jesus M.; Arnaud-haond, Sophie; Duarte, Carlos M.. |
| The marine realm represents 70% of the surface of the biosphere and contains a rich variety of organisms, including more than 34 of the 36 living phyla, some of which are only found in the oceans. The number of marine species used by humans is growing at unprecedented rates, including the rapid domestication of marine species for aquaculture and the discovery of natural products and genes of medical and biotechnological interest in marine biota. The rapid growth in the human appropriation of marine genetic resources (MGRs), with over 18,000 natural products and 4,900 patents associated with genes of marine organisms, with the latter growing at 12% per year, demonstrates that the use of MGRs is no longer a vision but a growing source of biotechnological and... |
| Tipo: Text |
Palavras-chave: Marine protected areas; Marine reserves; Natural products; Gene patents; Law of the sea. |
| Ano: 2010 |
URL: https://archimer.ifremer.fr/doc/00018/12897/9935.pdf |
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| Registros recuperados: 18 | |
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