Data/hora: 01/06/2024 07:48:04

Provedor de dados: | 74
País: | Brazil
Título: | Computational analysis suggests that virulence of Chromobacterium violaceum might be linked to biofilm formation and poly-NAG biosynthesis
Autores: | Becker,Sidnei; Soares,Cíntia; Porto,Luismar Marques.
Data: | 2009-01-01
Ano: | 2009
Palavras-chave: | Biofilms; Exopolysaccharide; Chromobacterium violaceum pathogenicity; Comparative genomics.
Resumo: | Groups of genes that produce exopolysaccharide with a N-acetyl-D-glucosamine monomer are in the genome of several pathogenic bacteria. Chromobacterium violaceum, an opportunistic pathogen, has the operon hmsHFR-CV2940, whose proteins can synthesize such polysaccharide. In this work, multiple alignments among proteins from bacteria that synthesize such polysaccharide were used to verify the existence of amino acids that might be critical for pathogen activity. Three-dimensional models were generated for spatial visualization of these amino acid residues. The analysis carried out showed that the protein HmsR preserves the amino acids D135, D228, Q264 and R267, considered critical for the formation of biofilms and, furthermore, that these amino acids are close to each other. The protein HmsF of C. violaceum preserves the residues D86, D87, H156 and W115. It was also shown that these residues are also close to each other in their spatial arrangement. For the proteins HmsH and CV2940 there is evidence of conservation of the residues R104 and W94, respectively. Conservation and favorable spatial location of those critical amino acids that constitute the proteins of the operon indicates that they preserve the same enzymatic function in biofilm synthesis. This is an indicator that the operon hmsHFR-CV2940 is a possible target in C. violaceum pathogenicity.
Tipo: | Info:eu-repo/semantics/article
Idioma: | Inglês
Identificador: | http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572009000300031
Editor: | Sociedade Brasileira de Genética
Relação: | 10.1590/S1415-47572009000300031
Formato: | text/html
Fonte: | Genetics and Molecular Biology  v.32 n.3 2009
Fonte: | info:eu-repo/semantics/openAccess