Consulta: subjectFacets:"DEB theory"
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A single bio-energetics growth and reproduction model for the oyster Crassostrea gigas in six Atlantic ecosystems
Provedor de dados: 5
Autores: Alunno-bruscia, Marianne; Bourles, Yves; Maurer, Daniele; Robert, Stephane; Mazurie, Joseph; Gangnery, Aline; Goulletquer, Philippe; Pouvreau, Stephane.
Many studies based on bioenergetics growth models have investigated the effects of environmental factors on oyster (Crassostrea gigas) growth and physiology. However, most of these models are site-specific and cannot be applied to other culture sites without the re-estimation of parameters or re-formulation of some processes. We aimed to develop a generic growth model suitable for application in contrasting environments, with a constant set of parameters. We tested the oyster-DEB model (Bourlès et al. 2009) for the stimulation of C. gigas growth in different cohorts (spats and adults) at major shellfish culture sites in France, in several years: Arcachon (1993–1994); Marennes-Oléron (2007); Quiberon (1999, 2000, 2001); Rade de Brest (2008); Baie du...
Tipo: Text
Palavras-chave: DEB theory; Modelling; Bivalves; Crassostrea gigas; Phytoplankton; Temperature effect; Coastal environment.
Ano: 2011
URL: http://archimer.ifremer.fr/doc/00043/15403/12762.pdf

Modelling growth and reproduction of the Pacific oyster Crassostrea gigas: Advances in the oyster-DEB model through application to a coastal pond
Provedor de dados: 5
Autores: Bourles, Yves; Alunno-bruscia, Marianne; Pouvreau, Stephane; Tollu, Guillaume; Leguay, Didier; Arnaud, Christophe; Goulletquer, Philippe; Kooijman, S.
A bio-energetic model, based on the DEB theory exists for the Pacific oyster Crassostrea gigas. Pouvreau et al. [Pouvreau, S., Bourles, Y., Lefebvre, S., Gangnery, A., Alunno-Bruscia, M., 2006. Application of a dynamic energy budget model to the Pacific oyster, C. gigas, reared under various environmental conditions. J. Sea Res. 56, 156–167.] successfully applied this model to oysters reared in three environments with no tide and low turbidity, using chlorophyll a concentration as food quantifier. However, the robustness of the oyster-DEB model needs to be validated in varying environments where different food quantifiers reflect the food available for oysters, as is the case in estuaries and most coastal ecosystems. We therefore tested the oyster-DEB...
Tipo: Text
Palavras-chave: Coastal Environment; Temperature effect; Food Quantifiers; Crassostrea gigas; Bivalves; Modelling; DEB theory.
Ano: 2009
URL: http://archimer.ifremer.fr/doc/2009/publication-6436.pdf

Caractérisation et modélisation des processus de bioaccumulation des PCB chez le merlu (Merluccius merluccius) du golfe du Lion
Provedor de dados: 5
Autores: Bodiguel, Xavier.
Understanding bioaccumulation mechanisms of persistent organic pollutants (POPs) is a major issue for environmental risk assessment. In this work, polychlorinated biphenyls (PCBs), a model contaminant family, has been studied in the European hake (Merluccius merluccius), a high trophic level species from the Gulf of Lions. High concentrations of PCBs were measured in hake from this area compared to those encountered in the population of the Bay of Biscay. PCB biomagnification was highlighted along its food web from marine phytoplankton, suggesting a strong influence of diet on contamination levels. The role of other biological processes was also apprehended in order to understand the high variability of observed levels. Thus, growth, sex, and also the...
Tipo: Text
Palavras-chave: DEB theory; Bioenergetic model; Gulf of Lions; Biomagnification; Food web; Hake; Bioaccumulation; Polychlorinated biphenyls; Organic contaminants; Théorie DEB; Modèle bioenergétique; Golfe du Lion; Bioamplification; Réseau trophique; Merlu; Bioaccumulation; Polychlorobiphényles; Contaminants organiques.
Ano: 2008
URL: http://archimer.ifremer.fr/doc/2008/these-6490.pdf

Applying Dynamic Energy Budget (DEB) theory to simulate growth and bio-energetics of blue mussels under low seston conditions
Provedor de dados: 5
Autores: Rosland, R; Strand, O; Alunno-bruscia, Marianne; Bacher, Cedric; Strohmeier, T.
A Dynamic Energy Budget (DEB) model for simulation of growth and bioenergetics of blue mussels (Mytilus edulis) has been tested in three low seston sites in southern Norway. The observations comprise four datasets from laboratory experiments (physiological and biometrical mussel data) and three datasets from in situ growth experiments (biometrical mussel data). Additional in situ data from commercial farms in southern Norway were used for estimation of  biometricalrelationships in the mussels. Three DEB parameters (shape coefficient, half saturation coefficient, and somatic maintenance rate coefficient) were estimated from experimental data, and the estimated parameters were complemented with parameter values from literature to establish a basic parameter...
Tipo: Text
Palavras-chave: Low seston; Modelling; DEB theory; Mytilus edulis; Mussel culture.
Ano: 2009
URL: http://archimer.ifremer.fr/doc/2009/publication-6266.pdf

Integrating the effects of salinity on the physiology of the eastern oyster, Crassostrea virginica, in the northern Gulf of Mexico through a Dynamic Energy Budget model
Provedor de dados: 5
Autores: Lavaud, Romain; La Peyre, Megan K.; Casas, Sandra M.; Bacher, Cedric; La Peyre, Jerome F.
We present a Dynamic Energy Budget (DEB) model for the eastern oyster, Crassostrea virginica, which enables the inclusion of salinity as a third environmental variable, on top of the standard foodr and temperature variables. Salinity changes have various effects on the physiology of oysters, potentially altering filtration and respiration rates, and ultimately impacting growth, reproduction and mortality. We tested different hypotheses as to how to include these effects in a DEB model for C. virginica. Specifically, we tested two potential mechanisms to explain changes in oyster shell growth (cm), tissue dry weight (g) and gonad dry weight (g) when salinity moves away from the ideal range: 1) a negative effect on filtration rate and 2) an additional...
Tipo: Text
Palavras-chave: DEB theory; Bioenergetics; Filtration; Maintenance; Growth; Estuary; Louisiana.
Ano: 2017
URL: http://archimer.ifremer.fr/doc/00400/51137/53773.pdf

New insights into the reproductive cycle of two Great Scallop populations in Brittany (France) using a DEB modelling approach
Provedor de dados: 5
Autores: Gourault, Melaine; Lavaud, Romain; Leynaert, Aude; Pecquerie, Laure; Paulet, Yves-marie; Pouvreau, Stephane.
The present study aimed to improve understanding of the environmental conditions influencing the reproductive cycle of the great scallop Pecten maximus in two locations in Brittany (France). We also evaluated potential consequences of future climate change for reproductive success in each site. We simulated reproductive traits (spawning occurrences and synchronicity among individuals) of P. maximus, using an existing Dynamic Energy Budget (DEB) model. To validate and test the model, we used biological and environmental datasets available for the Bay of Brest (West Brittany, France) between 1998 and 2003. We also applied the scallop DEB model in the Bay of Saint-Brieuc (North Brittany, France) for the same period (1998–2003) to compare the reproductive...
Tipo: Text
Palavras-chave: Pecten maximus; DEB theory; Reproduction cycle; IPCC scenarios; Bay of Brest; Bay of Saint-Brieuc.
Ano: 2019
URL: https://archimer.ifremer.fr/doc/00458/57012/58910.pdf

Understanding the dynamics of δ13C and δ15N in soft tissues of the bivalve Crassostrea gigas facing environmental fluctuations in the context of Dynamic Energy Budgets (DEB)
Provedor de dados: 5
Autores: Emmery, Antoine; Lefebvre, Sebastien; Alunno-bruscia, Marianne; Kooijman, S. A. L. M.
We studied the dynamics of stable isotopes δ13C and δ15N of an opportunistic suspension feeder the Pacific oyster (Crassostrea gigas) to better understand the factors that influence the trophic enrichment (trophic-shift, Δ) between primary producers and consumers. Most of the previous studies on this topic do not quantify mass fluxes or isotopic discrimination phenomena in the organism, which are two pillars in isotope ecology. We used a dynamic energy budget (DEB) approach (Kooijman, 2010) to quantify i) the fluxes of elements and isotopes in C. gigas soft tissues and ii) the impact of the scaled feeding level, the organism mass and the isotopic ratio of food on the "trophic-shift" Δ, and isotope turnover in tissues. Calibration and parametrization...
Tipo: Text
Palavras-chave: Oyster; Isotopic ratio; Discrimination; Trophic-shift; Diet; DEB theory.
Ano: 2011
URL: http://archimer.ifremer.fr/doc/00043/15434/12784.pdf

Feeding and energetics of the great scallop, Pecten maximus, through a DEB model
Provedor de dados: 5
Autores: Lavaud, Romain; Flye-sainte-marie, Jonathan; Jean, Fred; Emmery, Antoine; Strand, Oivind; Kooijman, Sebastiaan A. L. M.
We developed a full life-cycle bioenergetic model for the great scallop P. maximusrelying on the concepts of the Dynamic Energy Budget (DEB) theory. The covariation method was implemented to estimate the parameters of a standard DEB model. Such models are able to predict various metabolic processes from a food availability marker and temperature in the environment. However, suspension-feeders are likely to feed on various trophic sources, from microalgae cells to detritus. They are also able to sort and select food particles very efficiently, depending on their size, energetic value or quality. The present model includes a mechanistic description of the feeding processes, based on Kooijman’s Synthesizing Unit principle which allow to deal with several food...
Tipo: Text
Palavras-chave: Pecten maximus; DEB theory; Synthesizing Units; Phytoplankton; Feeding process; Bay of Brest.
Ano: 2014
URL: http://archimer.ifremer.fr/doc/00162/27316/28458.pdf