Consulta: creatorFacets:"Barille, Laurent"
Registros recuperados: 38
Data/hora: 11/06/2024 01:05:09

Cold storage of Pacific oysters out of water: biometry, intervalval water and sensory assessment
Provedor de dados: 5
Autores: Buzin, Florence; Baudon, Violaine; Cardinal, Mireille; Barille, Laurent; Haure, Joel.
Due to the important economic activity of oyster production in France, microalgal toxic events represent a significant constraint for shellfish farmers who face closures of bivalve production-sites. The frequency of closures of 3 weeks or less represents half of the total closures along the French coasts. Cold storage could be a simple and affordable solution for temporary and short-term storage before commercialisation. A stock of marketable Pacific oyster Crassostrea gigas was therefore stored during 22 days in non-immersed conditions at 3 degrees C with 100% humidity. At the end of the experiment, the oyster mortality rate remained at a low level of less than 3.5%. The sensory attributes, odour, appearance, texture and flavour, did not show significant...
Tipo: Text
Palavras-chave: Quality control; Refrigeration; Sensory evaluation; Shelf life; Shellfish.
Ano: 2011
URL: http://archimer.ifremer.fr/doc/00041/15245/12840.pdf

Feeding of Crassostrea gigas at high seston load : modeling requirements
Provedor de dados: 5
Autores: Barille, Laurent; Prou, Jean.
Ecophysiological experiments conducted in situ in the Bay of Marennes-Oléron during a spring and neap tide cycle in May 1991 , were designed to get a better representation of 2 important components of the energy budget of the Japanese oyster Crassostrea gigas : clearance rate and selection efficiency. The relationships previously established by Raillard et al. ( 1993) are re-evaluated by integrating the effects of high seston loads, typical of tidal effect within estuaries, on the physiological processes. For the clearance rate, the re-evaluated parameterization includes: - a negative effect of turbidity. - a clogging threshold set to 192 mg/l. Selection efficiency parameterizations are modified by incorporating : - a constant inorganic ingestion for...
Tipo: Text
Palavras-chave: Matematical model; Oyster; Crassostrea gigas; Clearance rate; Seclection efficency; Marennes Oleron; Charente Maritime.
Ano: 1993
URL: http://archimer.ifremer.fr/doc/00102/21299/18913.pdf

Etude expérimentale de la rétention et du tri particulaire chez Crassostrea gigas : utilisation de régimes alimentaires monospécifiques composés d'Haslea ostrearia
Provedor de dados: 5
Autores: Barille, Laurent.
L'aquaculture extensive de l'huitre japonaise Crassostrea gigas représente, avec 130 000 tonnes par an, la première ressource marine nationale (Heral, 1986). Le bassin de Marennes-Oléron, qui compte pour 40 %  dans cette production, enregistre depuis vingt ans un ralentissement de la croissance des huîtres. La capacité trophique du bassin, production du phytoplancton et apport organique, ne permettrait pas une production optimale compte tenu du stock de mollusques actuel (Heral et al., 1990). Une partie de la réponse passe par une meilleure compréhension de l'adaptation trophique de Crassotrea gigas soumise dans ce milieu estuarien, à des variations marquées de la qualité et de la quantité de la nourri ture disponible. Dans le but de mieux comprendre les...
Tipo: Text
Ano: 1990
URL: http://archimer.ifremer.fr/doc/00441/55211/56681.pdf

Angiospermes des côtes françaises Manche-Atlantique. Propositions pour un indicateur DCE et premières estimations de la qualité
Provedor de dados: 5
Autores: Auby, Isabelle; Oger-jeanneret, Helene; Sauriau, Pierre-guy; Hily, Christian; Barille, Laurent.
Tipo: Text
Ano: 2010
URL: http://archimer.ifremer.fr/doc/00032/14358/11646.pdf

Temporal changes in the phytoplankton community along the French coast of the eastern English Channel and the southern Bight of the North Sea
Provedor de dados: 5
Autores: Hernandez- Farinas, Tania; Soudant, Dominique; Barille, Laurent; Belin, Catherine; Lefebvre, Alain; Bacher, Cedric.
Long-term trends in the phytoplankton community along the French coast of the English Channel and southern Bight of the North Sea were studied and related to physico-chemical factors and large-climatic indices. Phytoplankton and hydrological data were acquired through three transects. Sampling took place between 1992 and 2011 as part of the French Phytoplankton Monitoring Network (REPHY) and the Regional Nutrients Monitoring Network (SRN). Trends in time-series were identified with dynamic linear models tailored to environmental monitoring data characteristics (e.g. irregular sampling frequency, missing data). Temporal and spatial patterns in the phytoplankton community were explained with a partial triadic analysis. Relationships between the phytoplankton...
Tipo: Text
Palavras-chave: Climatic indicators; Dynamic linear model; Environmental drivers; Multivariate analysis; Phytoplankton.
Ano: 2014
URL: http://archimer.ifremer.fr/doc/00195/30619/32177.pdf

Modélisation de l'affinage de l'huître Crassostrea gigas alimentée avec la diatomée Skeletonema costatum
Provedor de dados: 5
Autores: Meleder, Vona; Barille-boyer, Anne-laure; Baud, Jean-pierre; Barille, Laurent; Cognie, Bruno; Rosa, Philippe.
The traditional fattening of the oyster Crassostrea gigas in oyster ponds of the French Atlantic Coast is submitted to natural environmental fluctuations. In order to reduce the growth variability of the soft parts of the bivalve, an intensive fattening process was developed, where the conditions of temperature, particulate organic and inorganic matter (POM and PIM) are controlled. This process relies on the production of the diatom Skeletonema costatum, which is then distributed to the oysters at an average concentration of 4–5 mg POM·L–1. An ecophysiological model of the oyster C. gigas, which simulates the evolution of somatic and gonad–reserve compartments, was applied to these conditions in order to analyse the bivalve responses. Experimentation was...
Tipo: Text
Palavras-chave: Modélisation; Affinage; Ecophysiologie; Crassostrea gigas; Skeletonema costatum; Modelling; Oyster fattening; Ecophysiology; Crassostrea gigas; Skeletonema costatum.
Ano: 2001
URL: http://archimer.ifremer.fr/doc/00021/13248/10285.pdf

Growth of the Pacific oyster (Crassostrea gigas) in a high-turbidity environment: Comparison of model simulations based on scope for growth and dynamic energy budgets
Provedor de dados: 5
Autores: Barille, Laurent; Lerouxel, Astrid; Dutertre, Mickael; Haure, Joel; Barille, Anne-laure; Pouvreau, Stephane; Alunno-bruscia, Marianne.
We compared growth simulations by dynamic energy budget (DEB) and scope for growth (SFG) models of the Pacific oyster Crassostrea gigas, cultivated in Bourgneuf Bay on the French Atlantic coast. This bay is located at a latitude in the middle of the European range of the species, and is characterized by high concentrations of suspended particulate matter (SPM) and a marked gradient between high-turbidity sites in the north (daily SPM &gt; 500 mg L-1) and intermediate-turbidity sites in the south. The models use two forcing variables: seawater temperature and food density. We tested two indices of food availability: chlorophyll a and microalgal concentrations. In the SFG model, food intake is simulated by a type-II Holling functional response, as in the DEB...
Tipo: Text
Palavras-chave: Oyster; Dynamic Energy Budget model; Scope for growth model; Turbidity.
Ano: 2011
URL: http://archimer.ifremer.fr/doc/00043/15433/12783.pdf

Spatial and temporal adjustments in gill and palp size in the oyster Crassostrea gigas
Provedor de dados: 5
Autores: Dutertre, Mickael; Ernande, Bruno; Haure, Joel; Barille, Laurent.
Spatial and temporal variations in gill and palp size were studied during 1 year in naturally-settled populations of the Pacific oyster Crassostrea gigas, reciprocally transplanted between two contrasting sites located along a marked gradient of turbidity conditions. The variability of suspended particulate matter (SPM) and food particles, estimated by the concentration of chlorophyll-a, was measured with in situ water-quality probes. Over a full seasonal cycle, oysters exposed to high-turbidity (HT) conditions exhibited a lower gill-to-palp (G:P) ratio, compared with those exposed to low-turbidity (LT) conditions. Seasonal variations in the G:P ratio were observed at the LT site in relation to the spring phytoplanktonic bloom, but differed from those that...
Tipo: Text
Ano: 2017
URL: http://archimer.ifremer.fr/doc/00351/46223/46145.pdf

Feeding response of the polychaete Sabellaria alveolata (Sabellariidae) to changes in seston concentration
Provedor de dados: 5
Autores: Dubois, Stanislas; Barille, Laurent; Cognie, Bruno.
Sabellaria alveolata is a tube-building gregarious polychaete that constructs large biogenic reefs. In macrotidal shellfish ecosystems, this species competes for food with cultivated suspension-feeders. The suspension-feeding activity and clearance rate of S. alveolata were investigated in response to changes in seston concentration. A flow-through system was designed to study 225 cm(2) reef blocks with more than 500 individuals. The experimental conditions were characterized by increasing concentrations of suspended particulate matter ranging from 6.5 to 153.8 mg L-1, while the organic content of the diet (microalgae Skeletonema costatum) decreased inversely from 49 to 9%, to mimic the dilution of organic matter by inorganic particles, characteristic of...
Tipo: Text
Palavras-chave: Bay of Mont Saint Michel; Tubiculous polychaete; Trophic capacity; Suspension feeders; Reefs; Feeding activity.
Ano: 2009
URL: http://archimer.ifremer.fr/doc/2009/publication-6778.pdf

Global change and climate-driven invasion of the Pacific oyster (Crassostrea gigas) along European coasts: a bioenergetics modelling approach
Provedor de dados: 5
Autores: Thomas, Yoann; Pouvreau, Stephane; Alunno-bruscia, Marianne; Barille, Laurent; Gohin, Francis; Bryere, Philippe; Gernez, Pierre.
Aim  The spread of non-indigenous species in marine ecosystems world-wide is one of today's most serious environmental concerns. Using mechanistic modelling, we investigated how global change relates to the invasion of European coasts by a non-native marine invertebrate, the Pacific oyster Crassostrea gigas.  Location Bourgneuf Bay on the French Atlantic coast was considered as the northern boundary of C. gigas expansion at the time of its introduction to Europe in the 1970s. From this latitudinal reference, variations in the spatial distribution of the C. gigas reproductive niche were analysed along the north-western European coast from Gibraltar to Norway.  Methods The effects of environmental variations on C. gigas physiology and phenology were studied...
Tipo: Text
Palavras-chave: Biogeographical range expansion; Crassostrea gigas; DEB model; European coasts; Functional traits; Global change; Individual-based model; Invasive species; Remote-sensing.
Ano: 2016
URL: https://archimer.ifremer.fr/doc/00287/39828/38459.pdf

Influence de la charge particulaire sur la filtration d'une population d'huître Crassostrea gigas dans le bassin estuarien de Marennes-Oléron (France) : analyse de deux cycle de marée
Provedor de dados: 5
Autores: Soletchnik, Patrick; Prou, Jean; Heral, Maurice; Barille, Laurent; Razet, Daniel; Guezennec, Loïc.
Filtration of oyster population (100 animals) have been followed during 16 days in raceway systems with continuous recorder of the input and output of the raceway for in situ turbidity and fluorescence. Experimental conditions were fluctuated with particulate matter which varied during a tidal cycle from 40 mg.l-1to 300 mg.l-1. During the same period the phytoplanktonic biomass presented synchronous variations form 7 to 20 µg.l-1 bound with sediment resuspension of phytobenthos and oyster biodeposit created by alternating currents. Filtration of oyster population during a neap tide cycle, variated between 1.2 and 2.8I.h-1 by animal for a calculated retention based on turbidity and between 2.4 and 4.8 l.h-1 by animal for a retention calculated with...
Tipo: Text
Palavras-chave: Marée; Charge particulaire; Marennes Oléron; Physiologie; Filtration; Crassostrea gigas; Huîtres.
Ano: 1991
URL: http://archimer.ifremer.fr/doc/1991/acte-3059.pdf

Modeling Japanese oyster physiological processes under natural tidal variation in suspended particulate matter
Provedor de dados: 5
Autores: Barille, Laurent; Prou, Jean.
Feeding and growth of the Japanese oyster Crassostrea gigas is simulated by a deterministic model. However, physiological processes, estimated by statistical relationships, have not been tested under extreme environmental conditions such as high level of suspended particulate matter. Ecophysiological experiments were therefore conducted in situ in the Bay of Marennes-Oléron during a spring and neap tide cycle in May 1991, to get a better representation of 2 important components of the energy budget of the Japanese oyster: clearance rate and selection efficiency. The relationships previously established by Raillard et al. (1993) are re-evaluated by integrating the action of high seston load, typical of tidal effect within estuaries, on the physiological...
Tipo: Text
Palavras-chave: Tidal cycles; Oysters culture; Growth; Feeding; Energy budget; Ecophysiology.
Ano: 1993
URL: http://archimer.ifremer.fr/doc/1993/acte-3827.PDF

Gut passage times in two bivalve molluscs fed toxic microalgae: Alexandrium minutum, A-catenella and Pseudo-nitzschia calliantha
Provedor de dados: 5
Autores: Gueguen, Marielle; Lassus, Patrick; Laabir, Mohamed; Bardouil, Michele; Baron, Regis; Sechet, Veronique; Truquet, Philippe; Amzil, Zouher; Barille, Laurent.
The occurrence of new phytoplankton species in a coastal area may be explained by the import of shellfish containing whole live algal cells in their digestive tracts. Indeed, shellfish containing toxic algal cells can induce both primary contaminations in safe areas ( initially free from toxic microalgae), and secondary contaminations of other shellfish growing in the same area via the faeces of the imported animals. To mitigate this problem, shellfish need to be placed in a separate holding tank and their intestinal content purged. For a deeper understanding of the risks associated with transferring contaminated shellfish, oysters ( Crassostrea gigas) and mussels ( Mytilus edulis) were purposely fed either Alexandrium minutum or A. catenella (...
Tipo: Text
Palavras-chave: Risk assessment; Toxic phytoplankton; Uptake; Gut passage; Mytilus edulis; Crassostrea gigas.
Ano: 2008
URL: http://archimer.ifremer.fr/doc/2008/publication-3897.pdf

Validation d'un modèle prédictif de distribution d'habitats benthiques côtiers - Application aux forêts denses de laminaires subtidales du littoral breton
Provedor de dados: 5
Autores: Meleder-tard, Vona; Barille, Laurent.
Cette étude a pour cadre général le projet européen MESH (Mapping European Seabed Habitats) dont l'objectif principal est de fournir à la communauté une expertise scientifique et technique forte, aussi bien dans la collecte de données pour la cartographie d'habitats benthiques, que pour la production cartographique elle-même, ainsi que pour une bonne utilisation de ces cartes. L'action "Modélisation prédictive", qui est une des six actions menées au sein du projet MESH, a pour objectif de prédire l'occurrence d'habitats selon l'approche proposée par (Roff and Taylor 2000) c'est-à-dire en se basant sur la géophysique. En effet, la physique de l'environnement détermine la nature des communautés biologiques présentes aussi bien dans le temps que dans...
Tipo: Text
Ano: 2007
URL: http://archimer.ifremer.fr/doc/00104/21567/19147.pdf

Diagnostic étendu de l'eutrophisation (DIETE). Rôle des sédiments dans le cycle des nutriments et impacts sur l'eutrophisation de la baie de Vilaine (2014-2017)
Provedor de dados: 5
Autores: Souchu, Philippe; Cochennec-laureau, Nathalie; Ratmaya, Widya; Retho, Michael; Andrieux, Francoise; Le Merrer, Yoann; Barille, Laurent; Barille, Anne-laure; Goubert, Evelyne; Plus, Martin; Laverman, Anniet.
Le projet DIETE a exploré les données hydrobiologiques (paramètres physico-chimiques, nutriments, phytoplancton) acquises depuis les années 80 dans les eaux côtières au large de la Loire et de la Vilaine, parallèlement à celles des deux fleuves. L’augmentation des concentrations de nitrates dans les eaux de la Loire, appuyée par les réserves sédimentaires de phosphates et de silicate ont entraîné de profonds bouleversements dans la dynamique du phytoplancton de la baie de Vilaine ces deux dernières décennies avec 1) une augmentation substantielle de la biomasse, 2) une modification importante de l’évolution saisonnière, 3) un changement dans les proportions entre diatomées et dinoflagellés au profit des diatomées. Ces résultats ouvrent tout un champ...
Tipo: Text
Palavras-chave: Eutophisation; Azote; Phosphore; Silicium; Sédiments; Modélisation.
Ano: 2018
URL: http://archimer.ifremer.fr/doc/00425/53695/54593.pdf

Toward Sentinel-2 High Resolution Remote Sensing of Suspended Particulate Matter in Very Turbid Waters: SPOT4 (Take5) Experiment in the Loire and Gironde Estuaries
Provedor de dados: 5
Autores: Gernez, Pierre; Lafon, Virginie; Lerouxel, Astrid; Curti, Cecile; Lubac, Bertrand; Cerisier, Sylvain; Barille, Laurent.
At the end of the SPOT4 mission, a four-month experiment was conducted in 2013 to acquire high spatial (20 m) and high temporal (5 days) resolution satellite data. In addition to the SPOT4 (Take5) dataset, we used several Landsat5, 7, 8 images to document the variations in suspended particulate matter (SPM) concentration in the turbid Gironde and Loire estuaries (France). Satellite-derived SPM concentration was validated using automated in situ turbidity measurements from two monitoring networks. The combination of a multi-temporal atmospheric correction method with a near-infrared to visible reflectance band ratio made it possible to quantify SPM surface concentration in moderately to extremely turbid waters (38-4320 g center dot m(-3)), at an accuracy...
Tipo: Text
Ano: 2015
URL: https://archimer.ifremer.fr/doc/00590/70198/68221.pdf

Influence du cycle semi-dirune et vives-eaux mortes-eaux sur la disponibilité du matériel particulaire et son utilisation par une population de Mytilus edulis
Provedor de dados: 5
Autores: Prou, Jean; Barille, Laurent; Heral, Maurice; Ratiskol, Gilles; Soletchnik, Patrick; Bougrier, Serge; Razet, Daniel; Geairon, Philippe.
During a fortnightly tidal cycle, a Mytilus edulis population was submitted to natural food conditions in the bay of Marennes-Oléron. During 4 tidal cycles, in vivo continuous measurements of turbidity and fluorescence were recorded to study the evolution of Total Particulate Matter (TPM), phaeopigments and chlorophyll-a concentrations. Turbidity in the water column is clearly influenced by resuspension of sediment. Degradated cells of phytoplankton were associated with sediments, involving strong correlation between phaeopigments and turbidity. High values of chlorophyll-a were encountered during neap tides when turbidity was low. No relation with resuspension processes were observed.  No effect of fortnightly variability on retention was observed by...
Tipo: Text
Palavras-chave: Ancova; Utilisation du matériel particulaire; Mytilus edulis; Moules.
Ano: 1994
URL: http://archimer.ifremer.fr/doc/1994/publication-3079.pdf

Evaluation de l’état écologique des masses d’eau de transition dans le cadre de la DCE. Etude de la pertinence du suivi des peuplements du microphytobenthos estuarien
Provedor de dados: 5
Autores: Ribeiro, Lourenço; Le Bris, Anthony; Hernandez Farinas, Tania; Buchet, Remi; Dutertre, Mickaël; Metzger, Edouard; Rosa, Philippe; Gernez, Pierre; Lerouxel, Astrid; Barille, Laurent.
In order to establish the ecological status of water bodies, the European Water Framework Directive (WFD) is based on the evaluation of a number of biological quality elements, as well as physical parameters supporting the biology. In estuaries, phytoplankton monitoring was not considered relevant because of the high turbidity characterizing the large metropolitan estuaries and the French overseas departments (Guyana). In this work, we considered the possibility of using microphytobenthos (MPB) as a biological indicator of the ecological status of estuaries. This activity report summarizes the actions undertaken in 2017 under an AFB / Université de Nantes convention, which is structured around two main axes: the first axis is based on the analysis of the...
Tipo: Text
Palavras-chave: DCE; Diatomées benthiques; Diversité; Estuaires; Facteurs naturels; Gradient de perturbation; Loire; Bio-indication; Microphytobenthos; Pressions anthropiques; Télédétection.; Anthropogenic pressures; Benthic diatoms; Bio-indication; Diversity; Estuary; Loire; Microphytobenthos; Natural factors; Perturbation gradient; Remote sensing; WFD.
Ano: 2018
URL: http://archimer.ifremer.fr/doc/00446/55725/57376.pdf

Does bivalve mucus favour the growth of their main food source, microalgae?
Provedor de dados: 5
Autores: Cognie, B; Barille, Laurent.
Bivalves, by releasing inorganic nutrients, can stimulate the growth of the primary producers on which they feed. Dissolved excretion and mineralization of biodeposits (pseudofaeces and faeces), two indirect processes related to their feeding activity, have already been identified. This study investigated whether microalgal growth is also dependent on the mucus secreted by bivalves and rejected with their biodeposits. An experimental study based on algal growth tests was conducted to determine whether the mucus coating the pseudofaeces and faeces of the oyster Crassostrea gigas (Thunberg) could stimulate the growth of nine marine microalgae: a Prasinophyceae [Tetraselmis suecica (Butcher)] and eight Diatomophyceae [Amphora sp. (Ehrenberg), Chaetoceros sp....
Tipo: Text
Palavras-chave: Bivalve; Microphyte; Mucus; Fèces; Pseudofèces; Bivalve; Microalgae; Mucus; Faeces; Pseudofaeces.
Ano: 1999
URL: http://archimer.ifremer.fr/doc/00325/43607/43926.pdf

Modelling of paralytic shellfish toxin biotransformations in the course of Crassostrea gigas detoxification kinetics
Provedor de dados: 5
Autores: Gueguen, Marielle; Baron, Regis; Bardouil, Michele; Truquet, Philippe; Haberkorn, Hansy; Lassus, Patrick; Barille, Laurent; Amzil, Zouher.
The aim of this study was to evaluate the importance of biotransformation of paralytic shellfish toxins during the detoxification process in contaminated oysters. Mathematical models based upon the detoxification patterns of digestive gland and other tissues were developed. It was demonstrated that biotransformations do not seem to play an important role in digestive gland or other tissue detoxification kinetics with our data set. Moreover, different toxin transfers from digestive gland toward other tissues were investigated. No significant transfer was highlighted in our data set. These first conclusions were drawn after comparing the results obtained from 13 biotransformations and identifiable transfer scenarios. Finally, to determine a more robust...
Tipo: Text
Palavras-chave: Detoxification kinetics modelling; Biotransformation of saxitoxin analogues; Oyster.
Ano: 2011
URL: http://archimer.ifremer.fr/doc/00049/16047/14309.pdf

Alimentation expérimentale de l'huître Crassostrea gigas à l'aide de navicules bleus Haslea ostrearia (Simonsen) de différentes tailles
Provedor de dados: 5
Autores: Barille, Laurent; Bougrier, Serge; Geairon, Philippe; Robert, Jean-michel.
The influence on the feeding physiology (clearance, filtration, ingestion, absorption) of the Japanese oyster Crassostrea gigas of low concentrations of suspended particulate matter (SPM ranging from 2 to 20 mg.l-l) and high food quality (mean organic fraction =54 %) was studied in the laboratory. Experimental diets were made up with three strains of the "blue diatom" Haslea ostrearia, which is responsible of the greening of oyster-ponds. The strains were characterized by different sizes (48, 65 and 98 µm respectively) but possessed the same density and biochemical composition. Clearance rate was found constant at 2.2 1.h(-l).g-l dry weight and therefore was not influenced by increasing seston load. Pseudofaeces production was observed for SPM...
Tipo: Text
Palavras-chave: Taille des particules; Qualité alimentaire; Haslea ostrearia; Crassostrea gigas; Alimentation; Particle size; Food quality; Haslea ostrearia; Crassostrea gigas; Feeding.
Ano: 1994
URL: http://archimer.ifremer.fr/doc/1994/publication-3070.pdf

Modélisation de l'écosystème du bassin de Marennes-Oléron (rapport 1992)
Provedor de dados: 5
Autores: Raillard, Olivier; Soletchnik, Patrick; Heral, Maurice; Prou, Jean; Bougrier, Serge; Razet, Daniel; Geairon, Philippe; Barille, Laurent; Guezennec, Loïc.
Les expérimentations on continu sur le site du Chapus au centre du bassin de Marennes-Oléron pendant le mois de mai 1991 et d'octobre 1991 ont permis de préciser la filtration des huîtres en fonction de la variabilité de la charge particulaire. Ces nouveaux résultats permettent d'affiner les modèles de croissance des huîtres. Un nouveau modèle de croissance phytoplanctonique permet de démontrer la sensibilité du bassin de Marennes-Oléron aux apports de nitrates provenant de la Charente, et leur impact sur la croissance des huîtres. L'étude des caractéristiques mécaniques des vases et des biodépôts ainsi que l'étude de l'agitation (houle et clapots, permet de modifier et de préciser les formulations d'un nouveau modèle de transport particulaire représentant...
Tipo: Text
Palavras-chave: Séries en continu; Filtration; Crassostrea gigas; Modèle phytoplanctonique; Sédiment; Modèle de transport particulaire; Bassin de Marennes Oléron.
Ano: 1992
URL: http://archimer.ifremer.fr/doc/00048/15907/13335.pdf

Assessing phytoplankton realized niches using a French National Phytoplankton Monitoring Network
Provedor de dados: 5
Autores: Hernandez Farinas, Tania; Bacher, Cedric; Soudant, Dominique; Belin, Catherine; Barille, Laurent.
Relating environmental factors to species occurrence is a fundamental step in a better understanding of the community structure, the spatial and temporal dynamics of populations and how species may respond to environmental changes. In this paper, we used phytoplankton occurrence data, from a French national phytoplankton monitoring network, and environmental variables with the aim of characterizing the realized ecological niches of phytoplankton groups. We selected 35 phytoplankton taxa representing the most important taxa in terms of occurrence frequency and abundance along the French coast of the eastern English Channel, the Southern Bight of the North Sea and the Atlantic Ocean. We show that environmental variables such as nutrient concentration, water...
Tipo: Text
Palavras-chave: Phytoplankton; Environment; Niche position; Tolerance; Kernel density; Outlying mean index.
Ano: 2015
URL: https://archimer.ifremer.fr/doc/00255/36627/35263.pdf

Observations des éléments structuraux intervenant dans les mécanismes de nutrition préingestifs chez l'huître japonaise Crassostrea gigas
Provedor de dados: 5
Autores: Barille, Laurent.
Recent feeding-physiology experiments have shown that the Japanese oyster Crassostrea gigas was able to operate a selection among inorganic and organic particles before ingestion. However, the underlying mechanisms are not well understood. Anatomical observations of different structures which may play a raie in the selection processes are brought together and submitted to the actual knowledge on bivalve feeding. The mantle lobes, the ciliary structure of the ordinary filaments, the marginal ventral groove and the labial palps are described.
Tipo: Text
Palavras-chave: Nutrition; Crassostrea gigas; Huîtres; Ecophysiologie.
Ano: 1994
URL: http://archimer.ifremer.fr/doc/1994/publication-3077.pdf

Contribution of benthic microalgae to the temporal variation in phytoplankton assemblages in a macrotidal system
Provedor de dados: 5
Autores: Hernandez Farinas, Tania; Ribeiro, Lourenco; Soudant, Dominique; Belin, Catherine; Bacher, Cedric; Lampert, Luis; Barille, Laurent.
Suspended marine benthic microalgae in the water column reflect the close relationship between the benthic and pelagic components of coastal ecosystems. In this study, a 12-year phytoplankton time-series was used to investigate the contribution of benthic microalgae to the pelagic system at a site along the French-Atlantic coast. Furthermore, all taxa identified were allocated into different growth forms in order to study their seasonal patterns. The highest contribution of benthic microalgae was observed during the winter period, reaching up to 60% of the carbon biomass in the water column. The haptobenthic growth form showed the highest contribution in terms of biomass, dominant in the fall-winter period when the turbidity and the river flow were high....
Tipo: Text
Palavras-chave: Co-inertia; Dynamic linear models; Epipelon; Epiphyton; Haptobenthos; Microphytobenthos growth forms; Seasonality; Tychoplankton.
Ano: 2017
URL: http://archimer.ifremer.fr/doc/00392/50345/51035.pdf

Assessing Alternative Microscopy-Based Approaches to Species Abundance Description of Intertidal Diatom Communities
Provedor de dados: 5
Autores: Ribeiro, Lourenço; Brotas, Vanda; Hernandez Farinas, Tania; Jesus, Bruno; Barille, Laurent.
Diatoms usually dominate microphytobenthic biofilms in coastal and estuarine intertidal environments. Yet, functional studies on biofilms often skip species analysis because benthic diatoms are notoriously difficult to extract from sediments and challenging to identify at that taxonomic level. Valid, less time-consuming alternatives would surely be welcomed and increase the inclusion of community structure information in microphytobenthos (MPB) ecophysiological studies. Starting with an original 181-species abundances matrix (OSM), obtained during a 2-year spatial–temporal survey in a Tagus Estuary intertidal flat with contrasting sediment textures, the current study assessed the effectiveness of several approaches to species abundances analysis. The...
Tipo: Text
Palavras-chave: Diatoms; Community structure; Intertidal flats; Microphytobenthos; Multivariate analysis; Taxonomic sufficiency.
Ano: 2020
URL: https://archimer.ifremer.fr/doc/00610/72187/70963.pdf

Evolution saisonnière de la filtration de bivalves intertidaux dans des conditions naturelles
Provedor de dados: 5
Autores: Deslous-paoli, Jean-marc; Heral, Maurice; Goulletquer, Philippe; Boromthanarat, Wilaiwan; Razet, Daniel; Garnier, Jacqueline; Prou, Jean; Barille, Laurent.
The study of cultivated ecosystems, once the trophic capacity ha! been determined and the molluscan stocks estimated, requires a knowledge of  the evolution of the seasonal consumption of food by molluscs in natural conditions. For Crassostrea gigas, Mytilus edulis, Cerastoderma edule, Ruditapes philippinarum, the amount and quality of food have no effect on the filtration rate, except for the high load of mineraI seston. First an increase of the filtration rate was shown for Mytilus edulis and Cerastoderma edule at the end of winter and beginning of spring. Moreover Crassostrea gigas and Ruditapes philippinarum have shown no increase or only a small summer one. This evolution did not seem to be linked with the environmental conditions (temperature,...
Tipo: Text
Palavras-chave: Natural food; Bivalves; Filtration rates; Nourritures naturelles; Bivalves; Taux de filtration.
Ano: 1987
URL: http://archimer.ifremer.fr/doc/1987/publication-3304.pdf

Bilan énergétique de l'huître japonaise Crassostrea gigas en conditions expérimentales de laboratoire au cours du mois de septembre 1991
Provedor de dados: 5
Autores: Soletchnik, Patrick; Bougrier, Serge; Razet, Daniel; Geairon, Philippe; Prou, Jean; Heral, Maurice; Barille, Laurent.
L'étude ci dessous, réalisée chez Crassostrea gigas, a comme objectif de comparer l'effet de différents types d'aliments sur le bilan énergétique de cette espèce.
Tipo: Text
Palavras-chave: Huître creuse; Crassostrea gigas; Bilan énergétique; Sources alimentaires; Biodépots; Tri pré-ingestif.
Ano: 1992
URL: http://archimer.ifremer.fr/doc/00100/21095/18720.pdf

COSELMAR. Compréhension des socio-écosystèmes littoraux et marins pour la prévention et la gestion des risques. Bilan scientifique 2013-2017
Provedor de dados: 5
Autores: Pardo, Sophie; Hess, Philipp; Simon, Elodie; Barille, Laurent; Geslin, Emmanuelle; Cognie, Bruno; Martin-jezequel, Véronique; Sechet, Véronique; Herrenknecht, Christine; Baron, Regis; Bourseau, Patrick; Amzil, Zouher; Masse, Anthony; Vandanjon, Laurent; Dumay, Justine; Lebeau, Thierry; Turpin, Vincent; Mondeguer, Florence; Petitgas, Pierre; Trouillet, Brice; Mercier, Denis; Guillotreau, Patrice; Guineberteau, Thierry; Mahevas, Stephanie; Schoefs, Franck; Sophie Pardo; Philipp Hess; Pauline Borgniet; Laurent Barillé; Emmanuelle Geslin; Bruno Cognie; Véronique Martin-Jezequel; Véronique Sechet; Christine Herrenknecht; Régis Baron; Patrick Bourseau; Zouher Amzil; Anthony Massé; Laurent Vandanjon; Justine Dumay; Thierry Lebeau; Vincent Turpin; Florence Mondeguer; Pierre Petitgas; Brice Trouillet.
COSELMAR, a 4-year project financed by the Région des Pays de la Loire at 2.1 M€, officially started on the 7th January 2013. The project is coordinated by Philipp Hess (IFREMER) and Sophie Pardo (Université de Nantes-LEMNA) and falls under the Federation for Research Institut Universitaire Mer et Littoral (IUML, FR CNRS 3473)*. COSELMAR has also been approved by the Scientific Council of the MSH Ange Guépin. COSELMAR is a research project uniting 5 research units of IFREMER and 11 laboratories of the Université de Nantes, along with academic partners, and national and international industries. The aim is to achieve a better understanding of the marine and coastal ecosystems and the associated resources. The project will also provide insights into risk...
Tipo: Text
Ano: 2017
URL: https://archimer.ifremer.fr/doc/00406/51793/52550.pdf

On biotic and abiotic drivers of the microphytobenthos seasonal cycle in a temperate intertidal mudflat: a modelling study
Provedor de dados: 5
Autores: Savelli, Raphael; Dupuy, Christine; Barille, Laurent; Lerouxel, Astrid; Guizien, Katell; Philippe, Anne; Bocher, Pierrick; Polsenaere, Pierre; Le Fouest, Vincent.
Microphytobenthos (MPB) from intertidal mudflats are key primary producers at the land–ocean interface. MPB can be more productive than phytoplankton and sustain both benthic and pelagic higher trophic levels. The objective of this study is to assess the contribution of light, mud temperature, and gastropod Peringia ulvae grazing pressure in shaping the seasonal MPB dynamics on the Brouage mudflat (NW France). We use a physical–biological coupled model applied to the sediment first centimetre for the year 2008. The simulated data compare to observations, including time-coincident remotely sensed and in situ data. The model suggests an MPB annual cycle characterised by a main spring bloom, a biomass depression in summer, and a moderate fall bloom. In early...
Tipo: Text
Ano: 2018
URL: https://archimer.ifremer.fr/doc/00471/58226/60732.pdf

Storage of Pacific oysters Crassostrea gigas in recirculating tank: ammonia excretion and potential nitrification rates
Provedor de dados: 5
Autores: Buzin, Florence; Dupuy, Beatrice; Lefebvre, Sebastien; Barille, Laurent; Haure, Joel.
In response to the closure of shellfish production sites due to increasing occurrence of toxic algal blooms, land-based recirculating aquaculture systems (RAS) could be used by producers to store a proportion of their stock temporarily. An RAS prototype was tested in this study to store Pacific oyster Crassostrea gigas over a range of temperatures. In such systems, the water temperature is a variable that could influence the bivalve excretion rate of ammonia, the concentration of which may become critical for the water quality. In this study, we first estimated the total ammonia nitrogen (TAN, N-NH4+ + N-NH3) excretion of the Pacific oyster and then investigated whether the bacterial population associated with the oysters could act as a natural biofilter...
Tipo: Text
Palavras-chave: Crassostrea gigas; Ammonia excretion; Nitrification rate; Recirculating system; Temperature.
Ano: 2015
URL: https://archimer.ifremer.fr/doc/00248/35889/34409.pdf

Ecophysiological deterministic model for Crassostrea gigas in an estuarine environment
Provedor de dados: 5
Autores: Barille, Laurent; Heral, Maurice; Barilleboyer, Al.
An ecophysiological deterministic model of growth, reproduction and interactions between the bivalve and its estuarine environ ment was established for the Japanese oyster Crassostrea gigas. The environmental variables used in the model are: total particulate matter, particulate organic matter, particulate inorganic matter, chlorophyll, phaeopigments, proteins, lipids and carbohydrates. Rates of clearance, filtration, ingestion, absorption and respiration along with efficiencies of retention, selection and absorption are modelled with endogenous (dry weight of the animal, energy allocation between growth and reproduction) and exogenous variables (temperature, food quality and quantity). The model simulate the temporal evolution of two compartments: somatic...
Tipo: Text
Palavras-chave: Crassoslrea gigas; Croissance; Écophysiologie; Modélisation; Turbidité; Crassostrea gigas; Ecophysiology; Growth; Modelling; Turbidity.
Ano: 1997
URL: http://archimer.ifremer.fr/doc/00038/14892/12219.pdf

Rising water temperatures, reproduction and recruitment of an invasive oyster, Crassostrea gigas, on the French Atlantic coast
Provedor de dados: 5
Autores: Dutertre, Mickael; Beninger, Peter G.; Barille, Laurent; Papin, Mathias; Haure, Joel.
The recent appearance and invasion of feral oysters (Crassostrea gigas) along the northern European Atlantic coast, underscores the necessity to investigate the relationship between environmental variables, reproductive physiology, larval development and recruitment. We studied these relationships at both high (HT) and intermediate (IT) - turbidity sites, through historical data on water temperatures, multi-parameter environmental probes, histological analyses, and field collections of planktonic larvae and settled post-larvae in 2005 and 2006. A progressive warming trend was observed, especially since 1995, when oyster proliferation first became severe. Threshold temperatures for oocyte growth, larval development and settlement were achieved in both 2005...
Tipo: Text
Palavras-chave: Aquaculture; Climate warming; Coastal waters; Crassostrea gigas; Reproductive cycle; Oyster larvae; Settlement; Turbidity.
Ano: 2010
URL: http://archimer.ifremer.fr/doc/00000/11150/7938.pdf

Temperature and seston quantity and quality effects on field reproduction of farmed oysters, Crassostrea gigas, in Bourgneuf Bay, France
Provedor de dados: 5
Autores: Dutertre, Mickael; Beninger, Peter G.; Barille, Laurent; Papin, Mathias; Rosa, Philippe; Barille, Anne-laure; Haure, Joel.
The proliferation of the voluntarily-introduced cupped oyster, Crassostrea gigas, has attained the proportions of species invasion in many intertidal habitats in Europe, presumably resulting from successful reproduction of farmed individuals. It is thus imperative to better understand the reproductive characteristics of farmed oysters, since they are directly under human control. We quantified the dry tissue mass (DTM), gametosomatic index (GSI), and reproductive cycle of farmed oysters at two sites in Bourgneuf Bay, France, in relation to environmental parameters using continuously-recording probes in 2005 and 2006. The GSI was developed for this study, based on the actual area occupied by gametes, rather than the area of the gonad previously used for...
Tipo: Text
Palavras-chave: Atlantic Ocean; Crassostrea gigas; Oyster farming; Bivalve; Gametosomatic index; Biological invasion; Atresia; Oocytes; Turbidity; Temperature; Reproduction.
Ano: 2009
URL: http://archimer.ifremer.fr/doc/2009/publication-6871.pdf

Stochastic Modeling of Forces on Jacket-Type Offshore Structures Colonized by Marine Growth
Provedor de dados: 5
Autores: Ameryoun, Hamed; Schoefs, Franck; Barille, Laurent; Thomas, Yoann.
The present paper deals with the stochastic modeling of bio-colonization for the computation of stochastic hydrodynamic loading on jacket-type offshore structures. It relies on a multidisciplinary study gathering biological and physical research fields that accounts for uncertainties at all the levels. Indeed, bio-colonization of offshore structures is a complex phenomenon with two major but distinct domains: (i) marine biology, whose processes are modeled with biomathematics methods, and (ii) hydrodynamic processes. This paper aims to connect these two domains. It proposes a stochastic model for the marine organism's growth and then continues with transfers for the assessment of drag coefficient and forces probability density functions that account for...
Tipo: Text
Palavras-chave: Marine growth; Biofouling; Wave loading; Stochastic modeling; Reliability; Jacket structures.
Ano: 2019
URL: https://archimer.ifremer.fr/doc/00605/71668/70107.pdf

Modelling the accumulation of PSP toxins in Thau Lagoon oysters (Crassostrea gigas) from trials using mixed cultures of Alexandrium catenella and Thalassiosira weissflogii
Provedor de dados: 5
Autores: Lassus, Patrick; Amzil, Zouher; Baron, Regis; Sechet, Veronique; Barille, Laurent; Abadie, Eric; Bardouil, Michele; Sibat, Manoella; Truquet, Philippe; Berard, Jean-baptiste; Gueguen, Marielle.
In October and November 2003 a bloom of the toxic dinoflagellate Alexandrium catenella was observed in the North-east zone of Thau lagoon (French Mediterranean coast). Sea water samples were collected every hours to evaluate time-related variations of phytoplankton concentrations and to compare the relative ratio of A. catenella versus other phytoplankton species during the outbreak. From these observations, trials using recirculated sea water systems were performed to: i) evaluate the physiological effects on oyster of increasing proportions of A. catenella within a mixed microalgal diet where the non-toxic diatom Thalassiosira weissflogii was present at concentration: 1500 cells ml(-1), ii) compare the effect of two temperatures (12 degrees C and 18...
Tipo: Text
Palavras-chave: Mediterranean Sea; Alexandrium catenella; Toxin content; Model; Crassostrea gigas; Paralytic shellfish poisoning.
Ano: 2007
URL: http://archimer.ifremer.fr/doc/2007/publication-2624.pdf

Latitudinal Patterns in European Seagrass Carbon Reserves: Influence of Seasonal Fluctuations versus Short-Term Stress and Disturbance Events
Provedor de dados: 5
Autores: Soissons, Laura M.; Haanstra, Eeke P.; Van Katwijk, Marieke M.; Asmus, Ragnhild; Auby, Isabelle; Barille, Laurent; Brun, Fernando G.; Cardoso, Patricia G.; Desroy, Nicolas; Fournier, Jerome; Ganthy, Florian; Garmendia, Joxe-mikel; Godet, Laurent; Grilo, Tiago F.; Kadel, Petra; Ondiviela, Barbara; Peralta, Gloria; Puente, Araceli; Recio, Maria; Rigouin, Loic; Valle, Mireia; Herman, Peter M. J.; Bouma, Tjeerd J.
Seagrass meadows form highly productive and valuable ecosystems in the marine environment. Throughout the year, seagrass meadows are exposed to abiotic and biotic variations linked to (i) seasonal fluctuations, (ii) short-term stress events such as, e.g., local nutrient enrichment, and (iii) small-scale disturbances such as, e.g., biomass removal by grazing. We hypothesized that short-term stress events and small-scale disturbances may affect seagrass chance for survival in temperate latitudes. To test this hypothesis we focused on seagrass carbon reserves in the form of starch stored seasonally in rhizomes, as these have been defined as a good indicator for winter survival. Twelve Zostera noltei meadows were monitored along a latitudinal gradient in...
Tipo: Text
Palavras-chave: Carbon reserves; European Atlantic coast; Latitude; Resilience; Zostera noltei; Climate setting; Stress events.
Ano: 2018
URL: https://archimer.ifremer.fr/doc/00423/53420/54308.pdf

Retention efficiency in oyster Crassostrea gigas exposed to variable food quantity and quality
Provedor de dados: 5
Autores: Barille, Laurent; Prou, Jean; Heral, Maurice; Bougrier, Serge.
Relative retention efficiency (Er%) of Crassostrea gigas was estimated in the laboratory with 7 diets consisting of algae and silt. Total particulates varied from 1.34 mg/l in natural sea water to 27.65 mg/l in natural sea water enriched with silt. It was also calculated from field experiment to get high concentration of seston up to 66 mg/l. It appeared that Crassostrea gigas did not adjust its retention according to the food quality and the gill porosity was controlled by the concentration of particulate matter. In low seston load (1.34 mg/l) the oyster showed no change in retention for particles larger than 3-4 µm (Equivalent Spherical Diameter, ESD) but at the highest concentration (66 mg/l) it could only retain with a maximum efficiency particles...
Tipo: Text
Palavras-chave: Crassostrea gigas; Dietary quality; Particle concentration; Physiological model; Retention efficiency.
Ano: 1992
URL: http://archimer.ifremer.fr/doc/00100/21096/18721.pdf