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Registros recuperados: 62
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Biological data extraction from imagery - How far can we go? A case study from the Mid-Atlantic Ridge 5
Cuvelier, Daphne; De Busserolles, Fanny; Lavaud, Romain; Floc'H, Estelle; Fabri, Marie-claire; Sarradin, Pierre-marie; Sarrazin, Jozee.
In the past few decades, hydrothermal vent research has progressed immensely, resulting in higher-quality samples and long-term studies. With time, scientists are becoming more aware of the impacts of sampling on the faunal communities and are looking for less invasive ways to investigate the vent ecosystems. In this perspective, imagery analysis plays a very important role. With this study, we test which factors can be quantitatively and accurately assessed based on imagery, through comparison with faunal sampling. Twelve instrumented chains were deployed on the Atlantic Eiffel Tower hydrothermal edifice and the corresponding study sites were subsequently sampled. Discrete, quantitative samples were compared to the imagery recorded during the experiment....
Tipo: Text Palavras-chave: Hydrothermal vents; Image analyses; Deep ocean; Taxonomic diversity; Mid-Atlantic Ridge; Data processing; Benthic ecology.
Ano: 2012 URL: http://archimer.ifremer.fr/doc/00117/22868/21643.pdf
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New information on the ecology of deep-sea vent communities in the azores triple junction area : preliminery results of the Diva 2 cruise (May 31-July 4, 1994) 5
Desbruyeres, Daniel; Alayse, Anne-marie; Antoine, Elisabeth; Barbier, Georges; Barriga, Fjas; Biscoito, Manuel; Briand, Patrick; Brulport, Jean-pierre; Comtet, Thierry; Cornec, Laurence; Crassous, Philippe; Dando, Paul; Fabri, Marie-claire; Felbeck, Horst; Lallier, Francois; Fiala Medioni, Aline; Goncalves, Joao; Menard, Frederic; Kerdoncuff, Jacques; Patching, John; Saldanha, Luis; Sarradin, Pierre-marie.
Tipo: Text
Ano: 1994 URL: http://archimer.ifremer.fr/doc/00179/29005/27432.pdf
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Biocénoses des fonds durs du bathyal et de l’abyssal. Sous-région marine Méditerranée occidentale. Evaluation initiale DCSMM. 5
Fabri, Marie-claire; Pedel, Laura.
Tipo: Text Palavras-chave: Méditerranée; Fonds durs; Coraux profonds; Roches bathyales; Roches abyssales; Biocénoses.
Ano: 2012 URL: https://archimer.ifremer.fr/doc/00331/44209/43778.pdf
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Cryptic species of Archinome (Annelida: Amphinomida) from vents and seeps 5
Borda, Elizabeth; Kudenov, Jerry D.; Chevaldonne, Pierre; Blake, James A.; Desbruyeres, Damien; Fabri, Marie-claire; Hourdez, Stephane; Pleijel, Fredrik; Shank, Timothy M.; Wilson, Nerida G.; Schulze, Anja; Rouse, Greg W..
Since its description from the Galapagos Rift in the mid-1980s, Archinome rosacea has been recorded at hydrothermal vents in the Pacific, Atlantic and Indian Oceans. Only recently was a second species described from the Pacific Antarctic Ridge. We inferred the identities and evolutionary relationships of Archinome representatives sampled from across the hydrothermal vent range of the genus, which is now extended to cold methane seeps. Species delimitation using mitochondrial cytochrome c oxidase subunit I (COI) recovered up to six lineages, whereas concatenated datasets (COI, 16S, 28S and ITS1) supported only four or five of these as clades. Morphological approaches alone were inconclusive to verify the identities of species owing to the lack of discrete...
Tipo: Text Palavras-chave: Deep sea; Hydrothermal vents; Cold methane seeps; Cryptic species; Polychaete.
Ano: 2013 URL: http://archimer.ifremer.fr/doc/00157/26814/24961.pdf
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Logbook de la campagne RAMOGE 2018 5
Fabri, Marie-claire; Daniel, Boris; Et Tous Les Participants,.
Bringing together France, Italy and the Principality of Monaco since 1976, the RAMOGE agreement is born of an awareness of the pollution of the sea. Its aim is to raise public awareness, develop actions and make recommendations for the preservation of the marine environment. In 2015, an exploration campaign of the deep zones of the RAMOGE area made it possible to acquire new data in the Natura 2000 sites of "Corniche Varoise" and "l'Estérel", as well as on other Italian and Monegasque sectors. . The RAMOGE project "exploration of deep zones of ecological interest" is based on 3 phases. Each country is invited to become involved in the implementation of one of these phases. After Italy in 2015, which facilitated the provision of nautical resources for...
Tipo: Text Palavras-chave: Méditerranée; RAMOGE; Biodiversité; Déchets.
Ano: 2018 URL: https://archimer.ifremer.fr/doc/00458/56957/58850.pdf
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Variability of PCB burden in 5 fish and sharks species of the French Mediterranean continental slope 5
Cresson, Pierre; Fabri, Marie-claire; Miralles, Francoise Marco; Dufour, Jean-louis; Elleboode, Romain; Sevin, Karine; Mahe, Kelig; Bouchoucha, Marc.
Despite being generally located far from contamination sources, deep marine ecosystems are impacted by chemicals like PCB. The PCB contamination in five fish and shark species collected in the continental slope of the Gulf of Lions (NW Mediterranean Sea) was measured, with a special focus on intra- and interspecific variability and on the driving factors. Significant differences occurred between species. Higher values were measured in Scyliorhinus canicula, Galeus melastomus and Helicolenus dactylopterus and lower values in Phycis blennoides and Lepidorhombus boscii. These differences might be explained by specific abilities to accumulate and eliminate contaminant, mostly through cytochrome P450 pathway. Interindividual variation was also high and no...
Tipo: Text Palavras-chave: Bioaccumulation; Continental slope; Gulf of Lions; PCB.
Ano: 2016 URL: http://archimer.ifremer.fr/doc/00313/42421/41790.pdf
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Format des Données Posidonies - DCE 2012. 5
Fabri, Marie-claire.
Document rassemblant les fiches modèles pour le formatage des données. Ce format est nécessaire pour une intégration semi-automatique des données dans la base de données (Quadrige²) en vue d'un archivage pérenne. Ces fiches concernent les posidonies en Méditerranée. Les données sont essentiellement acquises dans le cadre de la DCE (Directive cadre sur l'Eau). Le programme est nommé POSIDONIES.
Tipo: Text Palavras-chave: Quadrige²; Posidonies; Rebent; DCE.
Ano: 2012 URL: http://archimer.ifremer.fr/doc/00117/22864/20676.pdf
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Mercury in organisms from the Northwestern Mediterranean slope: Importance of food sources 5
Cresson, Pierre; Fabri, Marie-claire; Bouchoucha, Marc; Brach-papa, Christophe; Chavanon, Fabienne; Jadaud, Angelique; Knoery, Joel; Marco-miralles, Francoise; Cossa, D..
Mercury (Hg) is a global threat for marine ecosystems, especially within the Mediterranean Sea. The concern is higher for deep-sea organisms, as the Hg concentration in their tissues is commonly high. To assess the influence of food supply at two trophic levels, total Hg concentrations and carbon and nitrogen stable isotope ratios were determined in 7 species (4 teleosts, 2 sharks, and 1 crustacean) sampled on the upper part of the continental slope of the Gulf of Lions (Northwestern Mediterranean Sea), at depths between 284 and 816 m. Mean Hg concentrations ranged from 1.30 ± 0.61 to 7.13 ± 7.09 μg g− 1 dry mass, with maximum values observed for small-spotted catshark Scyliorhinus canicula. For all species except blue whiting Micromesistius poutassou, Hg...
Tipo: Text Palavras-chave: Continental slope; Trophic webs; Depth; Teleosts; Sharks; Stable isotopes.
Ano: 2014 URL: http://archimer.ifremer.fr/doc/00206/31759/30693.pdf
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Discovery of Messinian Canyons and new seismic stratigraphic model, Offshore Provence (SE France): implications for the hydrographic network reconstruction 5
Tassy, A.; Fournier, F.; Munch, P.; Borgomano, J.; Thinon, I.; Fabri, Marie-claire; Rabineau, M.; Arfib, B.; Begot, J.; Beslier, M. -o; Cornee, J. -j.; Fournillon, A.; Gorini, C.; Guennoc, P.; Leonide, P.; Oudet, J.; Paquet, F.; Sage, F.; Toullec, R..
The interpretation of high-resolution 2D marine seismic profiles together with the analysis of sea-bottom cores allowed a stratigraphic and structural framework of the Provence continental shelf to be proposed. The integration of onshore and offshore stratigraphy, structure and geomorphology provided new insights into Messinian paleotopography and paleohydrography. A geological map of the offshore Provence continental shelf, isobath map of the base Plio-Quaternary surface are presented for the first time in this area. The base Plio-Quaternary surface is a polyphased unconformity that is composed of deep canyons developed by fluvial erosion during the Messinian event, and wave-cut surfaces formed during post-Messinian transgressions. The study evidenced a...
Tipo: Text Palavras-chave: Western Mediterranean; Provence continental shelf; Base Plio-Quaternary surface; Submarine canyon; Karst; Offshore seismic data; Shallow coring; Geological mapping.
Ano: 2014 URL: http://archimer.ifremer.fr/doc/00189/30027/28512.pdf
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Habitats particuliers du bathyal et de l’abyssal. Sous-région marine Méditerranée occidentale. Evaluation initiale DCSMM. 5
Fabri, Marie-claire; Pedel, Laura.
Tipo: Text Palavras-chave: Méditerranée; Habitats particuliers; Bathyal; Abyssal; Conventions; Espèces protégées.
Ano: 2012 URL: https://archimer.ifremer.fr/doc/00331/44210/43779.pdf
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Santa Maria di Leuca Province (Mediterranean Sea): Identification of Suitable Mounds for Cold-Water Coral Settlement Using Geomorphometric Proxies and Maxent Methods 5
Bargain, Annaelle; Marchese, Fabrice; Savini, Alessandra; Taviani, Marco; Fabri, Marie-claire.
The Santa Maria di Leuca (SML) cold-water coral province (northern Ionian Sea) has the largest occurrence of a living white coral community currently known in the Mediterranean Sea. Madrepora oculata and Lophelia pertusa, identified as marking sensitive habitats of relevance by the General Fisheries Commission for the Mediterranean, have been observed heterogeneously distributed on the summits of several mounds. This particularly patchy and uneven distribution in addition to their importance for regional biodiversity highlights the need to better understand their environmental preferences and predict their distribution. Bathymetric data (40 m resolution) was used to derive seafloor characteristics. A fine scale index quantifying the landscape elevation...
Tipo: Text Palavras-chave: Predictive habitat mapping; Maxent; Cold-water coral; Ecological proxies; Santa Maria di Leuca; Mediterranean Sea.
Ano: 2017 URL: https://archimer.ifremer.fr/doc/00407/51826/52418.pdf
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Combining the Biocean database for deep-sea benthic data with the online Ocean Biogeographic Information System 5
Fabri, Marie-claire; Galeron, Joelle; Larour, Michel; Maudire, Gilbert.
The Biocean database was designed to collate the extremely large volume of data collected from different deep-sea ecosystem studies conducted by Ifremer's department of 'Environnement Profond' (Deep-Sea Environment). This database comes in a 6-application package: 2 of them are used on research vessels to collect operational data, whereas the others are used to link with a core database back on land. The latter are used to: (1) manage taxonomic nomenclature, (2) monitor the identification of faunal collections, (3) fill in chemical analyses results or measurement data files and (4) add or extract data from the database. Biocean was designed to facilitate ecosystem studies in the deep sea. It represents an important new resource for deep-sea ecologists and...
Tipo: Text Palavras-chave: Environmental parameters; Biodiversity; Benthos; Taxonomy; Biogeography; Deep sea ecosystems; Data management.
Ano: 2006 URL: http://archimer.ifremer.fr/doc/2006/publication-1581.pdf
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Guide MIOP - Méthode pour l'acquisition d'Imagerie OPtique (MIOP) pour le suivi de l'Etat Ecologique des écosystèmes marins profonds benthiques 5
Fabri, Marie-claire; Pedel, Laura; Menot, Lenaick; Van Den Beld, Inge.
Ce guide reprend l'ensemble des métriques proposées dans le cadre de la stratégie de surveillance nationale des écosystèmes benthiques profonds évoquées dans le rapport "mesure de l'état écologique des habitats benthiques du domaine bathyal à partir de l'imagerie optique (Sélection de métrique et proposition d'une stratégie de surveillance = stratégie d'échantillonnage)" (Pedel et al. 2013). Il décrit les différentes méthodes d'acquisition vidéo selon les métriques à mesurer: 1.4 Répartition des écosystèmes 1.5 Etendue d'un habitat 1.6 Etat des communautés benthiques (Densité, Taux de couverture, Richesse et composition spécifique, Etat des colonies) 1.3 Structure de taille d'une population Une validation des standards reste à faire avec les pays européens...
Tipo: Text Palavras-chave: DCSMM; Méditerranée; Etat écologique; Bathyal; Vidéos; Photos; Mesure de métriques.
Ano: 2013 URL: http://archimer.ifremer.fr/doc/00172/28305/26581.pdf
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Description et cartographie des biocénoses benthiques rencontrées au cours de la campagne MEDSEACAN (Aamp/Comex) 5
Pedel, Laura; Fabri, Marie-claire.
Cette étude a été réalisée par l'Ifremer Toulon (LER/PAC) à la demande du MEDDTL (Ministère de l'Ecologie, du Développement Durable, des Transports et du Logement) dans le cadre de l'Evaluation Initiale pour la DCSMM (Directive Cadre pour la Stratégie sur le Milieu Marin). Elle recense les biocénoses, faciès et espèces observés pendant la campagne MEDSEACAN (Aamp/Comex). Les informations ont été extraites des enregistrements vidéos des 150 plongées de la campagne, et ont été organisées dans un SIG dans lequel sont géoréférencées les biocénoses, les faciès et les espèces observées dans les différents canyons. Le traitement des données vidéos de la campagne MEDSEACAN a grandement contribué à la réalisation de trois fiches concernant les biocénoses bathyales...
Tipo: Text
Ano: 2011 URL: http://archimer.ifremer.fr/doc/00044/15513/12900.pdf
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Review of literature on the implementation of the MSFD to the deep Mediterranean Sea 5
Fabri, Marie-claire; Brind'Amour, Anik; Jadaud, Angelique; Galgani, Francois; Vaz, Sandrine; Taviani, Marco; Scarcella, Giuseppe; Canals, Miquel; Sanchez, Anna; Grimalt, Joan; Galil, Bella; Goren, Menachem; Schembri, Patrick; Evans, Julian; Knittweis, Leyla; Cantafaro, Anna-lucia; Fanelli, Emanuela; Carugati, Laura; Danovaro, Roberto.
Summary based on the state-of-the-art for the deep Mediterranean Sea with the final aim of identifying knowledge and gaps, descriptor by descriptor (such as lack of data, indicators, thresholds). This document is an analysis of all scientific publications, national and international reports and grey literature available on the implementation of the MSFD to the deep Mediterranean Sea.
Tipo: Text
Ano: 2018 URL: https://archimer.ifremer.fr/doc/00426/53809/57345.pdf
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Conversion des données Comex aux formats Ifremer Adelie et Alamer 5
Pedel, Laura; Fabri, Marie-claire.
Ce protocole a été défini au cours d'un contrat financé par le MEDDTL (Ministère de l'Ecologie, du Développement Durable, des Transports et du Logement) et réalisé par l'Ifremer Toulon (LER/PAC). Ce travail faisait partie de l'Evaluation Initiale pour la DCSMM (Directive Cadre pour la Stratégie sur le Milieu Marin), il s'agissait d'extraire les informations sur les biocénoses, faciès et espèces des enregistrements vidéos de la campagne MEDSEACAN (Aamp/Comex). Ce document récapitule l'ensemble des étapes à suivre pour convertir les fichiers de navigation du ROV Achille de la Comex, en fichiers de navigation intégrable dans les logiciels Ifremer Adelie et Alamer (satellite de la base de données Biocean). Ce document propose aussi une méthode de compression...
Tipo: Text
Ano: 2011 URL: http://archimer.ifremer.fr/doc/00044/15512/12899.pdf
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Are spatial variations in the diets of hydrothermal fauna linked to local environmental conditions? 5
De Busserolles, F.; Sarrazin, Jozee; Gauthier, Olivier; Gelinas, Y.; Fabri, Marie-claire; Sarradin, Pierre-marie; Desbruyeres, Daniel.
Trophic relationships in Bathymodiolus azoricus mussel bed communities on the Tour Eiffel hydrothermal edifice (Lucky Strike) were assessed using delta C-13 and delta N-15 signatures from 14 hydrothermal species. The nutritional basis of B. azoricus was also investigated with delta S-34. Faunal samples and environmental data (temperature, pH, total dissolved sulfide, iron and copper concentrations) were collected from 12 different locations on the edifice. Chemical conditions varied between microhabitats, and were all correlated to temperature. Carbon and nitrogen isotopic results revealed the presence of two, apparently independent, trophic groups. The first was composed of symbiont-bearing fauna (B. azoricus and their associated polychaetes...
Tipo: Text Palavras-chave: Lucky Strike (37 degrees 17.29 ' N 32 degrees 16.45 ' W); Mid Atlantic Ridge; Food webs; Hydrothermal springs; Environmental conditions; Stable isotopes.
Ano: 2009 URL: http://archimer.ifremer.fr/doc/2009/publication-7312.pdf
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Typologie des biocénoses benthiques de Méditerranée Version 2 5
Michez, Noemie; Fourt, Maia; Aish, Annabelle; Bellan, Gérard; Bellan Santini, Denise; Chevaldonne, Pierre; Fabri, Marie-claire; Goujard, Adrien; Harmelin, Jean-georges; Labrune, Celine; Pergent, Gerard; Sartoretto, Stephane; Vacelet, Jean; Verlaque, Marc.
Suite à l’acquisition de nouvelles informations sur les habitats marins méditerranéens, une mise à jour du référentiel national était nécessaire pour qu’il soit le reflet des connaissances actuelles. Ces nouvelles informations proviennent principalement de deux campagnes d’exploration des roches profondes et des canyons méditerranéens appelées MEDSEACAN et CORSEACAN, de CARTHAM (Cartographie des Habitats Marins) – deux programmes pilotés par l’Agence des Aires Marines Protégées – ainsi que de propositions émanant directement de la communauté scientifique. En collaboration avec les experts scientifiques benthologues, ces nouvelles observations ont été confrontées à la typologie (Michez et al., 2011) et des modifications et compléments ont été décidés. Ce...
Tipo: Text
Ano: 2014 URL: http://archimer.ifremer.fr/doc/00272/38315/36556.pdf
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Consignes de saisie Quadrige² - Echantillonneurs Passifs - Programme CHIMIE ECHPASS SBSE - Stratégie SBSE Campagne Med DCE 5
Fabri, Marie-claire.
Manuel utilisateur pour la saisie des données la base Quadrige² concernant les analyses de chimie dans l'eau par échantillonneurs passifs, en Méditerranée. Les données ont été acquises dans le cadre de la DCE (Directive cadre sur l'Eau).
Tipo: Text Palavras-chave: Quadrige²; Chimie dans l'eau; DCE; Échantillonneurs passifs SBSE; Composés organiques hydrophobes (HAP; PCB et pesticides organochlorés).
Ano: 2013 URL: http://archimer.ifremer.fr/doc/00171/28274/26526.pdf
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Community structure and temperature dynamics within a mussel assemblage on the Southern East Pacific Rise 5
Sarrazin, Jozee; Walter, Cecile; Sarradin, Pierre-marie; Brind'Amour, Anik; Desbruyeres, Daniel; Briand, Patrick; Fabri, Marie-claire; Van Gaever, S; Vanreusel, A; Bachraty, Charleyne; Thiebaut, E.
The composition, biomass and diversity of the fauna in a Bathymodiolus thermophilus mussel assemblage colonizing diffuse flow areas on the SEPR is described and compared with biological characteristics of other hydrothermal assemblages. The spatio-temporal dynamics of temperatures over fine scales within the mussel habitat are characterized using newly-developed statistical approaches. Temperature data obtained from two adjacent habitats (a cirriped assemblage and a bare substratum) are compared. The results of the temperature data show that the mean temperature and the temperature variations were significantly higher in the mussel assemblage (mean temperature: 4.12 +/- 1.85 degrees C) in comparison with 2.40 +/- 0.14 degrees C in the cirriped assemblage...
Tipo: Text Palavras-chave: East Pacific Rise; Temperature dynamics; Biomass; Diversity; Bathymodiolus thermophilus; Mussel assemblage; Hydrothermal vents.
Ano: 2006 URL: http://archimer.ifremer.fr/doc/2006/publication-3570.pdf
Registros recuperados: 62
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