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The Bos taurus-Bos indicus balance in fertility and milk related genes. Repositório Alice
KASARAPU, P.; PORTO NETO, L. R.; FORTES, M. R. S.; LEHNERT, S. A.; MUDADU, M. de A.; COUTINHO, L. L.; REGITANO, L. C. de A.; GEORGE, A.; REVERTER, A..
Numerical approaches to high-density single nucleotide polymorphism (SNP) data are often employed independently to address individual questions. We linked independent approaches in a bioinformatics pipeline for further insight. The pipeline driven by heterozygosity and Hardy-Weinberg equilibrium (HWE) analyses was applied to characterize Bos taurus and Bos indicus ancestry. We infer a gene co-heterozygosity network that regulates bovine fertility, from data on 18,363 cattle with genotypes for 729,068 SNP. Hierarchical clustering separated populations according to Bos taurus and Bos indicus ancestry. The weights of the first principal component were subjected to Normal mixture modelling allowing the estimation of a gene?s contribution to the Bos taurus-Bos...
Tipo: Artigo em periódico indexado (ALICE) Palavras-chave: Hardy-Weinberg equilibrium; Bos Indicus; Bos Taurus.
Ano: 2017 URL: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1074938
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The Bos taurus-Bos indicus balance in fertility and milk related genes. Repositório Alice
KASARAPU, P.; PORTO-NETO, L. R.; FORTES, M. R. S.; LEHNERT, S. A.; MUDADU, M. de A.; COUTINHO, L.; REGITANO, L. C. de A.; GEORGE, A.; REVERTER, A..
Numerical approaches to high-density single nucleotide polymorphism (SNP) data are often employed independently to address individual questions. We linked independent approaches in a bioinformatics pipeline for further insight. The pipeline driven by heterozygosity and Hardy-Weinberg equilibrium (HWE) analyses was applied to characterize Bos taurus and Bos indicus ancestry. We infer a gene co-heterozygosity network that regulates bovine fertility, from data on 18,363 cattle with genotypes for 729,068 SNP. Hierarchical clustering separated populations according to Bos taurus and Bos indicus ancestry. The weights of the first principal component were subjected to Normal mixture modelling allowing the estimation of a gene's contribution to the Bos taurus-Bos...
Tipo: Artigo em periódico indexado (ALICE) Palavras-chave: Bioinformática; Polimorfismo de nucleotídeo único; Hardy-Weinberg equilibrium; Bos taurus; Bos indicus; Bioinformatics; Single nucleotide polymorphism.
Ano: 2017 URL: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1086886
Registros recuperados: 2
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