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Assessment of congruence between co-occurrence and functional networks: A new framework for revealing community assembly rules ArchiMer
Legras, Gaëlle; Loiseau, Nicolas; Gaertner, Jean-claude; Poggiale, Jean-christophe; Lenco, Dino; Mazouni, Nabila; Mérigot, Bastien.
Describing how communities change over space and time is crucial to better understand and predict the functioning of ecosystems. We propose a new methodological framework, based on network theory and modularity concept, to determine which type of mechanisms (i.e. deterministic versus stochastic processes) has the strongest influence on structuring communities. This framework is based on the computation and comparison of two networks: the co-occurrence (based on species abundances) and the functional networks (based on the species traits values). In this way we can assess whether the species belonging to a given functional group also belong to the same co-occurrence group. We adapted the Dg index of Gauzens et al. (2015) to analyze congruence between both...
Tipo: Text
Ano: 2019 URL: https://archimer.ifremer.fr/doc/00599/71142/69458.pdf
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Morphological traits measured for 89 fish species sampled in the Mediterranean Sea during MEDITS scientific surveys ArchiMer
Brind'Amour, Anik; Mérigot, Bastien; Ordines, Francesc; Carbonara, Pierluigi; Follesa, Maria; Jadaud, Angelique; Maiorano, Porzia; Rabiller, Manuella; Denis, Axelle; Di Santo, Carla; Cavaillé, Thomas; Theil, Andréa; Spedicato, Maria Teresa.
The data come from organisms and pictures collected during the MEDITS annual bottom trawl surveys conducted between 2011 and 2013 (Bertrand et al. 2002). MEDITS surveys cover the continental shelf (10 m to 200 m depth) and the upper part of the continental slope (200 m to 800 m) on the Mediterranean. A total of 1511 individuals from 85 fish species were collected from seven Mediterranean areas (South Adriatic Sea, Sardinia, Gulf of Lions, around Cyprus, Mallorca, Tyrrhenian Sea, and North West Ionian Sea). A set of 14 morphological traits related to the habitat and the diet of the species were measured in the field and on pictures using the ImageJ software (version 1.47, http://imagej.nih.gov/ij/) (see Granger et al. 2015 and Brind'Amour et al. submitted...
Tipo: Dataset
Ano: 2016 URL: http://dx.doi.org/10.17882/41825
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Stability of the relationships among demersal fish assemblages and environmental-trawling drivers at large spatio-temporal scales in the northern Mediterranean Sea ArchiMer
Mérigot, Bastien; Gaertner, Jean-claude; Brind’amour, Anik; Carbonara, Pierluigi; Esteban, Antonio; Garcia-ruiz, Cristina; Gristina, Michele; Imzilen, Taha; Jadaud, Angelique; Joksimovic, Aleksandar; Kavadas, Stefanos; Kolitari, Jerina; Maina, Irida; Maiorano, Porzia; Manfredi, Chiara; Micallef, Reno; Peristeraki, Panagiota; Relini, Giulio; Sbrana, Mario; Spedicato, Maria Teresa; Thasitis, Ioannis; Vittori, Stefania; Vrgoc, Nedo.
Trawling pressure and environmental changes may affect the composition of fish assemblages. Our knowledge on large spatio-temporal patterns of demersal fish composition remains incomplete for the Mediterranean Sea. We investigated (1) the spatio-temporal stability of demersal assemblages, (2) the relationships between these assemblages and potential structuring factors (trawling pressure and environmental conditions) in order to assess the dynamic of the assemblage structure at the scale of the northern Mediterranean Sea. We analysed a dataset of 18062 hauls from 10 to 800 m depth performed annually during the last two decades across 17 Geographical Sub-Areas (GSAs) (MEDITS program). A multi-table analysis (STATICO-CoA) evidenced a strong inter-GSAs...
Tipo: Text Palavras-chave: Species composition; Stability; Demersal assemblages; Environment; Fishing pressure; Large scale; Co-inertia analysis; STATICO-CoA.
Ano: 2019 URL: https://archimer.ifremer.fr/doc/00584/69629/67485.pdf
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