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DNA barcoding in Mucorales: an inventory of biodiversity Naturalis
Walther, G.; Pawłowska, J.; Alastruey-Izquierdo, A.; Wrzosek, M.; Rodriguez-Tudela, J.L.; Dolatabadi, S.; Chakrabarti, A.; Hoog, G.S. de.
The order Mucorales comprises predominantly fast-growing saprotrophic fungi, some of which are used for the fermentation of foodstuffs but it also includes species known to cause infections in patients with severe immune or metabolic impairments. To inventory biodiversity in Mucorales ITS barcodes of 668 strains in 203 taxa were generated covering more than two thirds of the recognised species. Using the ITS sequences, Molecular Operational Taxonomic Units were defined by a similarity threshold of 99 %. An LSU sequence was generated for each unit as well. Analysis of the LSU sequences revealed that conventional phenotypic classifications of the Mucoraceae are highly artificial. The LSU- and ITS-based trees suggest that characters, such as rhizoids and...
Tipo: Article / Letter to the editor Palavras-chave: Backusella; Biodiversity; Clinical relevance; DNA barcoding; Intraspecific variability; ITS; LSU; Mucor; Mucorales; Nomenclature; Rhizomucor; Taxonomy; Zygorhynchus.
Ano: 2013 URL: http://www.repository.naturalis.nl/record/532353
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Fungal Planet description sheets: 154–213 Naturalis
Crous, P.W.; Wingfield, M.J.; Guarro, J.; Cheewangkoon, R.; Bank, M. van der; Swart, W.J.; Stchigel, A.M.; Cano-Lira, J.F.; Roux, J.; Madrid, H.; Damm, U.; Wood, A.R.; Shuttleworth, L.A.; Hodges, C.S.; Munster, M.; Jesús Yáñez-Morales, M. de; Zúñiga-Estrada, L.; Cruywagen, E.M.; Hoog, G.S. de; Silvera, C.; Najafzadeh, J.; Davison, E.M.; Davison, P.J.N.; Barrett, M.D.; Barrett, R.L.; Manamgoda, D.S.; Minnis, A.M.; Kleczewski, N.M.; Flory, S.L.; Castlebury, L.A.; Clay, K.; Hyde, K.D.; Maússe-Sitoe, S.N.D.; Chen, Shuaifei; Lechat, C.; Hairaud, M.; Lesage-Meessen, L.; Pawłowska, J.; Wilk, M.; Śliwińska-Wyrzychowska, A.; Mętrak, M.; Wrzosek, M.; Pavlic-Zupanc, D.; Maleme, H.M.; Slippers, B.; Mac Cormack, W.P.; Archuby, D.I.; Grünwald, N.J.; Tellería, M.T.; Dueñas, M.; Martín, M.P.; Marincowitz, S.; Beer, Z.W. de; Perez, C.A.; Gené, J.; Marin-Felix, Y.; Groenewald, J.Z..
Novel species of microfungi described in the present study include the following from South Africa: Camarosporium aloes, Phaeococcomyces aloes and Phoma aloes from Aloe, C. psoraleae, Diaporthe psoraleae and D. psoraleae-pinnatae from Psoralea, Colletotrichum euphorbiae from Euphorbia, Coniothyrium prosopidis and Peyronellaea prosopidis from Prosopis, Diaporthe cassines from Cassine, D. diospyricola from Diospyros, Diaporthe maytenicola from Maytenus, Harknessia proteae from Protea, Neofusicoccum ursorum and N. cryptoaustrale from Eucalyptus, Ochrocladosporium adansoniae from Adansonia, Pilidium pseudoconcavum from Greyia radlkoferi, Stagonospora pseudopaludosa from Phragmites and Toxicocladosporium ficiniae from Ficinia. Several species were also...
Tipo: Article / Letter to the editor Palavras-chave: ITS DNA barcodes; LSU; Novel fungal species; Systematics.
Ano: 2013 URL: http://www.repository.naturalis.nl/record/531798
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Fungal Planet description sheets: 558–624 Naturalis
Crous, P.W.; Wingfield, M.J.; Burgess, , T.I.; Hardy, G.E.St.J.; Barber, P.A.; Alvarado,, P.; Barnes, C.W.; Buchanan, P.K.; Heykoop, M.; Moreno, G.; Vabeikhokhei, J.M.C.; Diepeningen, A.D. van; Hoa, N. van; Tri, M. van; Wiederhold, N.P.; Wrzosek, M.; Zothanzama, J.; Groenewald, J.Z.; Thangavel, R.; Spuy, S. van der; Barili, A.; Barrett, S.; Cacciola, S.O.; Cano-Lira, J.F.; Crane, C.; Decock, C.; Gibertoni, T.B.; Guarro, J.; Guevara-Suarez, M.; Hubka, V.; Kolarík, M.; Lira, C.R.S.; Ordoñez, M.E.; Padamsee, M.; Ryvarden, L.; Soares, A.M.; Stchigel, A.M.; Sutton, D.A.; Vizzini, A.; Weir, B.S.; Acharya, K.; Aloi, F.; Baseia, I.G.; Blanchette, R.A.; Bordallo, J.J.; Bratek, Z.; Butler, T.; Cano-Canals, J.; Carlavilla, J.R.; Chander, J.; Cheewangkoon, R.; Cruz, R.H.S.F.; Silva, M. da; Dutta, A.K.; Ercole, E.; Escobio, V.; Esteve-Raventós, F.; Flores, F.A.; Gené, J.; Góis, J.S.; Haines, L.; Held, B.W.; Horta Jung, M.; Hosaka, K.; Jung, J.; Jurjević, Ž.; Kautman, V.; Kautmanova, I.; Kiyashko, A.A.; Kozanek, M.; Kubátová, A.; Lafourcade, M.; Spada, F. La; Latha, K.P.D.; Madrid, H.; Malysheva, E.F.; Manimohan, P.; Manjón, J.L.; Martín, M.P.; Mata, M.; Merényi, Z.; Morte, A.; Nagy, I.; Normand, A.-C.; Paloi, S.; Pattison, N.; Pawłowska, J.; Pereira, O.L.; Petterson, M.E.; Picillo, B.; Raj, K.N.A.; Roberts, A.; Rodríguez, A.; Rodríguez-Campo, F.J.; Romański, M.; Ruszkiewicz-Michalska, M.; Scanu, B.; Schena, L.; Semelbauer, M.; Sharma, R.; Shouche, Y.S.; Silva, V.; Staniaszek-Kik, M.; Stielow, J.B.; Tapia, C.; Taylor, P.W.J.; Toome-Heller, M..
Novel species of fungi described in this study include those from various countries as follows: Australia: Banksiophoma australiensis (incl. Banksiophoma gen. nov.) on Banksia coccinea, Davidiellomyces australiensis (incl. Davidiellomyces gen. nov.) on Cyperaceae, Didymocyrtis banksiae on Banksia sessilis var. cygnorum, Disculoides calophyllae on Corymbia calophylla, Harknessia banksiae on Banksia sessilis, Harknessia banksiae-repens on Banksia repens, Harknessia banksiigena on Banksia sessilis var. cygnorum, Harknessia communis on Podocarpus sp., Harknessia platyphyllae on Eucalyptus platyphylla, Myrtacremonium eucalypti (incl. Myrtacremonium gen. nov.) on Eucalyptus globulus, Myrtapenidiella balenae on Eucalyptus sp., Myrtapenidiella eucalyptigena on...
Tipo: Article / Letter to the editor Palavras-chave: ITS nrDNA barcodes; LSU; Novel fungal species; Systematics.
Ano: 2017 URL: http://www.repository.naturalis.nl/record/631070
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The family structure of the Mucorales: a synoptic revision based on comprehensive multigene-genealogies Naturalis
Hoffmann, K.; Pawłowska, J.; Walther, G.; Wrzosek, M.; Hoog, G.S. de; Benny, G.L.; Kirk, P.M.; Voigt, K..
The Mucorales (Mucoromycotina) are one of the most ancient groups of fungi comprising ubiquitous, mostly saprotrophic organisms. The first comprehensive molecular studies 11 yr ago revealed the traditional classification scheme, mainly based on morphology, as highly artificial. Since then only single clades have been investigated in detail but a robust classification of the higher levels based on DNA data has not been published yet. Therefore we provide a classification based on a phylogenetic analysis of four molecular markers including the large and the small subunit of the ribosomal DNA, the partial actin gene and the partial gene for the translation elongation factor 1-alpha. The dataset comprises 201 isolates in 103 species and represents about one...
Tipo: Article / Letter to the editor Palavras-chave: Mucorales; Families; Phylogeny.
Ano: 2013 URL: http://www.repository.naturalis.nl/record/532035
Registros recuperados: 4
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