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Registros recuperados: 3
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A model-based approach to selection of tag SNPs Inra
Nicolas, P.; Sun, F.; Li, L.M..
Tipo: Journal Article Palavras-chave: SINGLE-NUCLEOTIDE POLYMORPHISMS; DESCRIPTION-LENGTH PRINCIPLE; GENOME-WIDE ASSOCIATION; LINKAGE DISEQUILIBRIUM; HAPLOTYPE BLOCKS; MATHEMATICAL-THEORY; MAXIMUM-LIKELIHOOD; RECOMBINATION RATE; COMPLEX DISEASE; INFERENCE.
Ano: 2006 URL: http://www.prodinra.inra.fr/prodinra/pinra/doc.xsp?id=PROD2009fe15e357&uri=/notices/prodinra1/2009/10/
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Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium Inra
Ma, L.J.; Van der Does, C.; Borkovich, K.A.; Coleman, J.J.; Daboussi, M.J.; di Pietro, A.; Dufresne, M.; Freitag, M.; Grabherr, M.; Henrissat, B.; Houterman, P.M.; Kang, S.; Shim, W.B.; Woloshuk, C.; Xie, X.; Xu, J.R.; Antoniw, J.; Baker, S.E.; Bluhm, B.H.; Breakspear, A.; Brown, D.W.; Butchko, R.A.E.; Chapman, S.; Coulson, R.; Coutinho, P.M.; Danchin, E.; Diener, A.; Gale, L.R.; Gardiner, D.M.; Goff, S.; Hammond-Kosack, K.E.; Hilburn, K.; Hua-Van, A.; Jonkers, W.; Kazan, K.; Kodira, C.D.; Koehrsen, M.; Kumar, L.; Lee, Y.H.; Li, L.; Manners, J.M.; Miranda-Saavedra, D.; Mukherjee, M.; Park, G.; Park, J.; Park, S.Y.; Proctor, R.H.; Regev, A.; Ruiz-Roldan, C.; Sain, D.; Sakthikumar, S.; Sykes, S.; Schwartz, D.C.; Turgeon, B.G.; Wapinski, I.; Yoder, O.; Young, S.; Zeng, Q.; Zhou, S.; Galagan, J.; Cuomo, C.; Kistler, H.C.; Rep, M..
Fusarium species are among the most important phytopathogenic and toxigenic fungi. To understand the molecular underpinnings of pathogenicity in the genus Fusarium, we compared the genomes of three phenotypically diverse species: Fusarium graminearum, Fusarium verticillioides and Fusarium oxysporum f. sp. lycopersici. Our analysis revealed lineage-specific (LS) genomic regions in F. oxysporum that include four entire chromosomes and account for more than one-quarter of the genome. LS regions are rich in transposons and genes with distinct evolutionary profiles but related to pathogenicity, indicative of horizontal acquisition. Experimentally, we demonstrate the transfer of two LS chromosomes between strains of F. oxysporum, converting a non-pathogenic...
Tipo: Journal Article Palavras-chave: MAXIMUM-LIKELIHOOD; POLYMORPHISM; HOST PATHOGEN RELATIONSHIPS; PATHOGENICITY; DISEASE RESISTANCE.
Ano: 2010 URL: http://www.prodinra.inra.fr/prodinra/pinra/doc.xsp?id=PROD20106b10c4f0&uri=/notices/prodinra1/2011/03/
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Molecular evolution of the crustacean hyperglycemic hormone family in ecdysozoans Inra
Montagné, N.; Desdevises, Y.; Soyez, D.; Toullec, J.-Y..
Background: Crustacean Hyperglycemic Hormone (CHH) family peptides are neurohormones known to regulate several important functions in decapod crustaceans such as ionic and energetic metabolism, molting and reproduction. The structural conservation of these peptides, together with the variety of functions they display, led us to investigate their evolutionary history. CHH family peptides exist in insects (Ion Transport Peptides) and may be present in all ecdysozoans as well. In order to extend the evolutionary study to the entire family, CHH family peptides were thus searched in taxa outside decapods, where they have been, to date, poorly investigated. Results: CHH family peptides were characterized by molecular cloning in a branchiopod crustacean, Daphnia...
Tipo: Journal Article Palavras-chave: HORMONE; GLYCEMIE; TENEUR EN SUCRE; HYPERGLYCEMIE; PROTEINE; ANALYSE PHYLOGENETIQUE; VITELLOGENESE; NEURONE; PEPTIDE; TENEUR EN PROTEINE; CLONAGE MOLECULAIRE; SEQUENCE NUCLEOTIDIQUE; PHYLOGENIE; PCR; ACIDE AMINE; BRACHIOPODA; COLLEMBOLA; EUCARYOTE; DAPHNIA MAGNA; FOLSOMIA CANDIDA; ECDYSOZOA VITELLOGENESIS-INHIBITING ACTIVITY; ARMADILLIDIUM-VULGARE CRUSTACEA; SHRIMP LITOPENAEUS-VANNAMEI; TRANSPORT PEPTIDE ITP; MAXIMUM-LIKELIHOOD; NUCLEOTIDE SUBSTITUTION; PHYLOGENETIC ANALYSIS; PERIPHERAL NEURONS; PROTEIN EVOLUTION; EYESTALK REMOVAL.
Ano: 2010 URL: http://www.prodinra.inra.fr/prodinra/pinra/doc.xsp?id=PROD20107696ebf9&uri=/notices/prodinra1/2010/10/
Registros recuperados: 3
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