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Larval connectivity of pearl oyster through biophysical modelling; evidence of food limitation and broodstock effect ArchiMer
Thomas, Yoann; Dumas, Franck; Andrefouet, Serge.
The black-lip pearl oyster (Pinctada margaritifera) is cultured extensively to produce black pearls, especially in French Polynesia atoll lagoons. This aquaculture relies on spat collection, a process that experiences spatial and temporal variability and needs to be optimized by understanding which factors influence recruitment. Here, we investigate the sensitivity of P. margaritifera larval dispersal to both physical and biological factors in the lagoon of Ahe atoll. Coupling a validated 3D larval dispersal model, a bioenergetics larval growth model following the Dynamic Energy Budget (DEB) theory, and a population dynamics model, the variability of lagoon-scale connectivity patterns and recruitment potential is investigated. The relative contribution of...
Tipo: Text Palavras-chave: Pearl oyster; Lagoon; Biophysical modelling; Connectivity; Population dynamics; DEB model.
Ano: 2016 URL: http://archimer.ifremer.fr/doc/00321/43192/42926.pdf
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Lagune de Salses - Leucate. I - Analyse bibliographique. ArchiMer
Ladagnous, Helene; Le Bec, Claude.
Subjected to multiple modifications which are responsible for important disruption in the functionning of the lagoon ecosystem during the last decenies, this lagoon is one of the most important sites for the region economy. The aim of this study is to propose a knowledges synthesis utilizable for a future fitting and management water plan. In fact, many studies realized during the last years are obsolete or uncompleted to explain the present state. Hydrogeololical studies, the most important, are not completed to understand the karst-lagoon relations. The wind-driven flow in the closed bassin, must be considered to explain biogeochemical process and the sewage discharges dispersal in the lagoon. Numerical models, with new physicochemical data, appear to be...
Tipo: Text Palavras-chave: Lagune; Méditerranée; Leucate; Salses; Géographie; Climatologie; Géologie; Hydrologie; Physico-chimie; Biologie; Pollution; Socio-économie; Règlementation; Lagoon; Mediterranean; Leucate; Salses; Geography; Climatology; Geology; Hydrology; Physico-chemistry; Biology; Pollution; Socio-economy; Legislation.
Ano: 1997 URL: http://archimer.ifremer.fr/doc/00073/18422/15963.pdf
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The sessile benthic community patterns on hard bottoms in response to continental vs. marine influence in northern Adriatic lagoons ArchiMer
Sconfietti, R; Marchini, A; Occhipinti Ambrogi, A; Sacchi, Cf.
The sessile hard bottoms zoobenthos community was studied in three northern Adriatic lagoons (Venice, Caorle and Grado-Marano). On the basis of previous researches (1993-1994 in Venice; 1997 in Grado-Marano), these lagoons had been subdivided into ecological sectors. The time consistency of such a subdivision has been assessed. The largest number of species was found in the lagoon of Venice, showing a high heterogeneity of environments and an intense shipping traffic, coupled with aquaculture activities that favoured the arrival of exotic species. A very poor community of obligate oligohaline species was found in Caorle. The natural and stable environment of Grado-Marano lagoon, with its large area of freshwater influence, hosted an intermediate number of...
Tipo: Text Palavras-chave: Benthos sessile; Fonds durs; Adriatique; Lagune; Gradient terre–mer; Sessile benthos; Hard bottoms; Adriatic; Lagoon; Continental vs. marine influence.
Ano: 2003 URL: http://archimer.ifremer.fr/doc/00322/43284/43019.pdf
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Effects of seasonal dynamics in a Zostera noltii meadow on phosphorus and iron cycles in a tidal mudflat (Arcachon Bay, France) ArchiMer
Deborde, Jonathan; Abrill, Gwenael; Mouret, Aurelia; Jezequel, Didier; Thouzeau, Gerard; Clavier, Jacques; Bachelet, Guy; Anschutz, Pierre.
A study was conducted in Arcachon Bay, France, to determine the effect of seasonal dynamics in a Zostera noltii meadow on P and Fe cycles in the superficial sediments of a tidal mudflat. The redox-sensitive Fe particulate pool and associated P in the root zone showed a seasonal variation following the growth and decay of Z. noltii biomass, with a maximum content during the growth period. In comparison, the bare sediments did not show significant seasonal changes. A dissolved inorganic phosphorus (DIP) uptake was measured from the water column to the sediment in vegetated sediments, whereas a net DIP efflux was observed in the unvegetated sediments. During the growth period, the formation of an iron oxihydroxide-rich zone occurred and acted as a trap for...
Tipo: Text Palavras-chave: Nutrient; Eelgrass growth; Intertidal zone; Lagoon; Early diagenesis.
Ano: 2008 URL: https://archimer.ifremer.fr/doc/00603/71539/69966.pdf
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Etude et modélisation des mécanismes impliqués dans la croissance de l'huître perlière, Pinctada margaritifera, au sein de l'écosystème conchylicole du lagon de l'atoll de Takapoto (Polynésie Française) ArchiMer
Pouvreau, Stephane.
L'huître perlière, Pinctada margaritifera (Linné, 1758) var. cumingi (Reeve), productrice de perles noires, fait l' objet d'une aquaculture florissante en Polynésie Française. Afin de pérenniser cette activité, un programme de recherche (le PGRN) a été lancé, en 1990, sur l' atoll de Takapoto. L' un des thèmes de ce programme réside dans l'étude de la capacité trophique d'un lagon soumis à une activité de perliculture. A cet égard, un modèle déterministe expliquant la croissance et la reproduction de P. margaritifera à partir des paramètres du milieu (notamment la nourriture disponible) a été mis au point. La construction de ce modèle a impliqué : ( 1) l'analyse de l'hydrobiologie du lagon; (2) l'étude de la physiologie de P. margaritifera; (3) le sui vi...
Tipo: Text Palavras-chave: Bivalves; Huîtres perlières; Pinctada margaritifera; Physiologie; Croissance; Reproduction; Hydrobiologie; Atoll; Lagon; Écosystème; Réseau trophique; Modélisation; Capacité trophique; Polynésie française; Bivalves; Pearl oyster; Pinctada ma rgaritifera; Physiology; Growth; Reproduction; Hydrobiology; Atoll; Lagoon; Ecosystem; Trophic web; Modelling; Carrying capacity; French Polynesia.
Ano: 1999 URL: http://archimer.ifremer.fr/doc/00034/14558/11856.pdf
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Phytoplankton dynamics in the southern New Caledonian lagoon during a southeast trade winds event ArchiMer
Neveux, Jacques; Lefebvre, Jean-pierre; Le Gendre, Romain; Dupouy, Cecile; Gallois, Francis; Courties, Claude; Gerard, Philippe; Fernandez, Jean-michel; Ouillon, Sylvain.
During the Echolag cruise (13 February-8 March 2007), the effect of 16-30 knot trade winds on abundance, community structure and dynamics of phytoplankton was investigated in the southern part of the New Caledonian coral reefs and surrounding oceanic waters. In this area, the coral reefs form two horn-like structures (hereinafter referred to as 'horn reefs'), oriented south-east, and separated by a relatively deep valley. Three repeated samplings at one week intervals of a 32 station array showed that trade winds induce surface water cooling and significant enrichment of mid- and bottom waters above the reef shelf. This enrichment appeared as the result of a general rise of the oceanic thermocline and nitracline due to the combination of trade winds and...
Tipo: Text Palavras-chave: Chlorophyll; Phycoerythrin; Flow cytometry; Phytoplankton; In vivo fluorescence; Growth rate; Trade winds; Lagoon; Internal wave; New Caledonia.
Ano: 2010 URL: http://archimer.ifremer.fr/doc/00013/12437/9258.pdf
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Fish as bioindicators of brackish ecosystem health: integrating biomarker responses and target pollutant concentrations ArchiMer
Corsi, I; Mariottini, M; Sensini, C; Lancini, L; Focardi, S.
Biological responses and contaminant levels in biological tissues were investigated in fish specimens of grass goby (Zosterisessor ophiocephalus) collected in spring 2000 in a moderately polluted brackish ecosystem, the Orbetello lagoon (southern coast of Tuscany, Italy). The complexity of harmful effects that contaminants may cause in fish over time was assessed. General condition indices (somatic liver index, and gonadal somatic index), cytochrome P450 enzymes, acetylcholinesterase activity and ovarian morphology were integrated with the content of organochlorines (OCs-hexachlorobenzene, DDTs and polychlorinated biphenyls) in liver and ovaries and p-nonylphenol (NP) and lower ethoxylate (NPE(1-2)) content in muscle and ovaries as well. Samples collected...
Tipo: Text Palavras-chave: Biomarqueurs; Lagunes; Poissons; Histologie des ovaires; Organochlorés; Biomarkers; Lagoon; Fish; Ovarian histology; Organochlorines; Nonylphenols.
Ano: 2003 URL: http://archimer.ifremer.fr/doc/00322/43293/43028.pdf
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Rapport 2018 Ifremer. Evolution des lagunes de Saint Pierre et Miquelon. Dynamique de renouvellement des masses d’eaux du Grand Barachois ArchiMer
Le Moine, Olivier; Geairon, Philippe; Robert, Stephane; Coudray, Sylvain; Fiandrino, Annie; Goraguer, Herle; Goulletquer, Philippe.
La dynamique des masses d'eaux et les flux de transit semble favoriser un comblement et/ou des limitations de renouvellement d'eau mettant en péril la durabilité de l’environnement de cette lagune Miquelonnaise. La Préfecture de Saint Pierre et Miquelon et la DTAM, en soutien à la gestion durable de cet environnement, ont sollicité l’Ifremer pour l’évaluation des flux d’alimentation de cette lagune. Une mission sur place a été réalisée en juin 2016 afin de coordonner les actions et effectuer les mesures préliminaires portant sur les jaugeages, la bathymétrie du chenal et la courantométrie horizontale. Ces données ont ensuite été complétées par une acquisition continue des vitesses de courant, avec des données disponibles du 2 juin au 15 novembre 2016, puis...
Tipo: Text Palavras-chave: Hydrodynamique; Renouvellements; Saint Pierre et Miquelon; Lagune; Grand Barachois; Hydrodynamic; Renewal rates; Saint Pierre et Miquelon; Lagoon; Grand Barachois.
Ano: 2019 URL: https://archimer.ifremer.fr/doc/00478/58974/61587.pdf
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Seasonal succession of cyanoprokaryotes in a hypereutrophic oligo-mesohaline lagoon from the South of France ArchiMer
Chomerat, Nicolas; Garnier, Robert; Bertrand, Céline; Cazaubon, Arlette.
The Bolmon lagoon (South of France) is an oligo-mesohaline coastal lagoon that has undergone intense eutrophication in the past decades, resulting from a strong concentration of human activities in its drainage basin. Consequently, it exhibits some characteristics typical of an advanced trophic state; namely, the disappearance of submerged vegetation, the permanently intense phytoplankton growth and the recurrence of cyanoprokaryote blooms. As cyanoprokaryote dominance in south-temperate saline lagoons is little reported, we carried out this study in order to understand the seasonal variations in the phytoplankton composition and biomass, and to analyse the influence of environmental parameters such as salinity, nutrients and climate on the seasonal...
Tipo: Text Palavras-chave: Turbid state; Pseudanabaena limnetica; Planktothrix agardhii; Phytoplankton; Mediterranean area; Cyanoprokaryotes; Ecology; Lagoon; Brackish water.
Ano: 2007 URL: http://archimer.ifremer.fr/doc/2007/publication-2593.pdf
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Relations milieu-ressources : impact de la conchyliculture sur un environnement lagunaire méditerranéen (Thau) ArchiMer
Deslous-paoli, Jean-marc; Souchu, Philippe; Mazouni, N; Juge, Claude; Dagault, Francoise.
Shellfish farming leaves its mark on the environment in which it has developed, and the men who depend upon it. These changes have altogether balanced the lagoon cycle and have caused disastrous episodic events. Increased water c1arity caused by the uptake of particulate material by shellfish farming allows seagrass to grow in deeper areas of the lagoon (down to five metres). Shellfish farming nutrient transformations increase ecosystem productivity, even if the filtration pressure keeps phytoplankton biomass at a low leveI. Storage of phosphorus and nitrogen in animal tissue limits eutrophication in this ecosystem. Transfer of oysters from growout facilities increases animal and vegetal specific diversity. The presence of large amounts of shellfish allows...
Tipo: Text Palavras-chave: Lagune; Conchyliculture; Biogéochimie; Benthos; Eutrophie; Lagoon; Shellfish farming; Biogeochemistry; Benthos; Eutrophication.
Ano: 1998 URL: https://archimer.ifremer.fr/doc/00039/15032/12365.pdf
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The biogeochemistry of mercury at the sediment water interface in the Thau lagoon. 1. Partition and speciation ArchiMer
Muresan Paslaru, Bogdan; Cossa, Daniel; Jezequel, D; Prevot, F; Kerbellec, S.
Solid sediment, pore and epibenthic waters were collected from the Thau lagoon (France) in order to study the post depositional partition and mobility of mercury and monomethylmercury in an organic rich sediment. Total Hg (HgT) and monomethymercury (MMHg) profiles were produced in both dissolved and solid phases. The distribution of HgT in the solid appeared to be related to the historical changes in the Hg inputs into the lagoon. HgT was in equilibrium between solid and solution in the sulfidic part of the cores, with a mean log Kd of 4.9 +- 0.2. The solid appeared to be a source of HgT for pore water in the upper oxic to suboxic parts of the cores. The MMHg represented a small fraction of HgT: 3-15 % and 0.02-0.80 % in the dissolved and in the solid...
Tipo: Text Palavras-chave: Fluxes; Partition; Sediment; Lagoon; Methylmercury; Mercury.
Ano: 2007 URL: http://archimer.ifremer.fr/doc/2006/publication-2083.pdf
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Approche dynamique et intégrée de l’évaluation d’un socio-écosystème côtier. Application à la lagune de Thau, son état écologique et ses bouquets de services écosystémiques sur la période 1970-2018 ArchiMer
Derolez, Valerie.
The Thau lagoon is one of the largest Mediterranean coastal lagoons and it supports many uses such as shellfish farming and fishing, priority activities of the territory, and more recently recreational activities. Since the 1960s, the increase in anthropogenic inputs, linked to the sudden growth of the population, led to microbiological contaminations of shellfish and degraded status of the lagoon, with negative impacts at sanitary, ecological and socio‐economic levels. Since the 1970s, the considerable work carried out on the waste water system on the watershed has made it possible to restore the lagoon, which then began an oligotrophication trajectory, a process that has still few been studied in coastal environments. Subject to a variety of pressures...
Tipo: Text Palavras-chave: Lagoon; Eutrophication; Oligotrophication; Ecological status; Ecosystem services; Socio‐ecosystem; Thau.; Lagune; Eutrophisation; Oligotrophisation; État écologique; Services écosystémiques; Socio‐écosystème; Thau..
Ano: 2020 URL: https://archimer.ifremer.fr/doc/00662/77364/78938.pdf
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Modeling the Influence of Eutrophication and Redox Conditions on Mercury Cycling at the Sediment-Water Interface in the Berre Lagoon ArchiMer
Pakhomova, Svetlana; Yakushev, Evgeniy; Protsenko, Elizaveta; Rigaud, Sylvain; Cossa, Daniel; Knoery, Joel; Couture, Raoul-marie; Radakovitch, Olivier; Yakubov, Shamil; Krzeminska, Dominika; Newton, Alice.
This study presents a specifically designed Mercury module in a coupled benthic-pelagic reactive-transport model - Bottom RedOx Model (BROM) that allows to study mercury (Hg) biogeochemistry under different conditions. This module considers the transformation of elemental mercury (Hg(0)), divalent mercury (Hg(II)) and methylmercury (MeHg). The behavior of mercury species in the model is interconnected with changes of oxygen, hydrogen sulfide, iron oxides, organic matter, and biota. We simulated the transformation and transport of Hg species in the water column and upper sediment layer under five different scenarios, combining various levels of oxygenation and trophic state in the Berre lagoon, a shallow eutrophic lagoon of the French Mediterranean coast...
Tipo: Text Palavras-chave: Mercury; Methylmercury; Biogeochemical modeling; Anoxia; Eutrophication; Lagoon; BROM.
Ano: 2018 URL: https://archimer.ifremer.fr/doc/00454/56535/58239.pdf
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Lagune de Salses-Leucate. II.- Contamination bactériologique et approche physico-chimique ArchiMer
Ladagnous, Helene; Le Bec, Claude.
En complément de l'analyse bibliographique (vol. 1), une étude de la contamination bactériologique et une approche de la qualité physico-chimique des eaux de la lagune ont été menées. Réalisées aux mois de mai et juin 1996, ces études ont pour objectif d'aborder de façon prospective, la totalité de l'étang. Des secteurs contaminés bactériologiquement ont pu être mis en évidence dans la partie sud de la lagune, sans que les sources soient clairement localisées. De même, pour la partie nord, les taches de contamination mises en évidence lors de précédentes études sont confirmées dans la zone des parcs conchylicoles. Les analyses de sels nutritifs montrent l'importance des résurgences karstiques dans les apports de nutriments, sans que le facteur limitant de...
Tipo: Text Palavras-chave: Lagune; Méditerranée; Leucate; Salses; Physico-chimie; Biogéochimie; Pollution; Bactériologie; Résurgence; Karst.; Lagoon; Mediterranean; Leucate; Salses; Physico-chemistry; Biogeochemistry; Pollution; Bacteriology; Resurgence-spring; Karst..
Ano: 1998 URL: http://archimer.ifremer.fr/doc/00073/18423/15966.pdf
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Impact assesment of Cyclone Sally on the almost atoll of Aitutaki (cook Islands) by remote sensing ArchiMer
Loubersac, Lionel; Dahl, Arthur; Collote, Pascal; Lemaire, Olivier; D'Ozouville, Laurent.
Damage from tropical cyclones can have major consequences for coral reef structure and ecology, as well as for human communities and human uses of coral reef resources. Remote sensing with high resolution multispectral satellite images can be used to asses large scale cyclone damages on coral reef areas. SPOT images of the almost atoll of AITUTAKI (Cook Islands) taken in june 1986 and february 1987 after the passage of Cyclone Sally near the island in january, were transformed and subjected to a textural analysis, and then compared to asses damage on the reefs and lagoon.New shallow sand and rubble deposits showed increased reflectance, while lower reflectance seemed associated with damage to reef structure, scouring in the lagoon, deposits of terrestrial...
Tipo: Text Palavras-chave: ICRS 6; Remote sensing; Reflectance; Stresses; Cyclones; Extreme events; Coral reef; Lagoon; Natural System; External Threats & Opportunities.
Ano: 1988 URL: http://archimer.ifremer.fr/doc/00143/25380/23518.pdf
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Contribution of climate variability to occurrences of anoxic crises 'malaigues' in the Thau lagoon (southern France) ArchiMer
Harzallah, Ali; Chapelle, Annie.
The Thau lagoon, located in southern France, suffers episodically in summer from anoxic crises known as 'malaigues'. Such crises mostly occur under warm conditions and low winds. In this paper we investigated effects of local weather conditions (air temperature, wind speed and precipitation over southern France), and two climate oscillations (the North Atlantic Oscillation and the El Ni (n) over tildeo Oscillation) on malaigue occurrences based on 33-year data series and dates when malaigues appeared. The study shows that the probability of occurrence of malaigues increases with increasing temperature and decreasing winds in August both mostly associated to the high phase of an index of North Atlantic Oscillation. Malaigues are found to be frequently...
Tipo: Text Palavras-chave: Lagoon; Thau; Malaigues; Anoxic crises; Climate variability; Lagune; Thau; Malaïgue; Eutrophisation; Variabilité climatique.
Ano: 2002 URL: http://archimer.ifremer.fr/doc/2002/publication-517.pdf
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Suitability of a lumped rainfall–runoff model for flashy tropical watersheds in New Caledonia ArchiMer
Desclaux, Terence; Lemonnier, Hugues; Genthon, Pierre; Soulard, Benoit; Le Gendre, Romain.
The GR4H lumped hourly rainfall–runoff model was assessed for its integration in a ridge-to-reef modelling framework. Particular attention was paid to rainfall representation, robustness of parameter estimates and ability to reproduce main runoff features. The study was conducted in four tropical mountainous watersheds in New Caledonia, exposed to intense rainfall events, large annual climatic variations triggered by El Niño oscillation, and wildfires. The inverse distance and elevation weighting algorithm outperformed other classical rainfall interpolation methods under data-limited conditions. The time-span of data needed for robust calibration was site-specific and varied from 6–7 years to 10 years, which may be linked to El Niño events and to...
Tipo: Text Palavras-chave: Hydrological model; Ridge-to-reef; GR4H; Rainfall-runoff model; Integrated modelling; New Caledonia; Lagoon; Wildfire.
Ano: 2018 URL: https://archimer.ifremer.fr/doc/00455/56681/58466.pdf
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Seasonal changes of chemical contamination in coastal waters during sediment resuspension ArchiMer
Bancon-montigny, Chrystelle; Gonzalez, Catherine; Delpoux, Sophie; Avenzac, Muriel; Spinelli, Sylvie; Mhadhbi, Takoua; Mejri, Kaouther; Hlaili, Asma Sakka; Pringault, Olivier.
The potential of remobilization of pollutants is a major problem for anthropogenic ecosystems, because even when the anthropogenic source of pollution is identified and removed, pollutants stored in sediments can be released into the water column and impact pelagic communities during sediment resuspension provoked by dredging, storms or bottom trawling. The objectives of the present study were to assess the changes observed in the chemical composition of the water column following resuspension of a polluted marine sediment and the consequences for the chemical composition of adjacent marine waters according to season. For that purpose, an experimental sediment resuspension protocol was performed on four distinct occasions, spring, summer, fall and winter,...
Tipo: Text Palavras-chave: Lagoon; Offshore; Trace metal elements; Pesticides; PAHs; Enrichment factor; Elutriate.
Ano: 2019 URL: https://archimer.ifremer.fr/doc/00505/61620/65644.pdf
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Analyse des captures des pêcheries marines et lagunaires d'Egypte en liaison avec la construction du haut barrage d'Assouan ArchiMer
Bebars, Mi; Lasserre, G; Hoai, Tl.
Annually exploited communities from the Nile delta and two nearby lagoons (Manzalah and Edkou) were monitored from 1962 to 1989. The changes in community structure were analysed as a function of two events: fishing pressure growth (motorized fishing vessels) which increased by a factor of 19 between 1952 and 1962; and the construction of the Aswan Dam, which was built between 1965 and 1969, reducing the flow of the Nile by 90 %. Before the construction of the dam, increased sea fishing pressure led to a decline in landings from 33,832 tons in 1962 to 8,522 tons in 1969, but with no structural change in the exploited community. However, following completion of the dam in 1969, the community structure changed and a significant correlation was detected...
Tipo: Text Palavras-chave: Impact; Aswan Dam; Yield; Fisheries; Diversity; Lagoon.
Ano: 1997 URL: http://archimer.ifremer.fr/doc/00093/20406/18073.pdf
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Fonctionnement hydrodynamique du bassin de Thau. Validation écologique d’un modèle numerique de circulation (programme Écothau) ArchiMer
Millet, B.
The wind-driven flow in the closed bassin de Thau is reproduced with a two-dimensional numerical model of horizontal ciruclation using an Alternate Direction Implicit scheme. A stochastic analysis of frequencies on a yearly time scale of the velocity fields computed in the model and a spatial and stochastic treatment of the term (H2 y2), similar to an effective coefficient of horizontal dispersion by shear effect are presented. This approach will allow the delineation, in a stochastic manner, of the main structures of the circulation in the lagoon and the spatial heterogeneity of its ecohydrodynamic features. Two attempts of analogical research are presented, with sorne examples of the spatial structure in the phytoplankton biomass and the map of the...
Tipo: Text Palavras-chave: Lagune; Modèle; Circulation; Dispersion; Sédiment; Lagoon; Model; Circulation; Dispersion; Sediment.
Ano: 1989 URL: http://archimer.ifremer.fr/doc/00323/43399/43093.pdf
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