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Interannual fluctuations in spring pelagic ecosystem productivity in the Bay of Biscay (northeast Atlantic) measured by mesozooplankton aspartate transcarbamylase activity and relationships with anchovy population dynamics ArchiMer
Bergeron, Jean-pierre; Koueta, Noussithe; Masse, Jacques.
The French part of the continental shelf of the Bay of Biscay (northeast Atlantic) is the habitat of an anchovy (Engraulis encrasicolus L.) population of scientific interest because of its economic importance and the trend towards greater interannual fluctuations in its abundance, particularly as a consequence of variations in recruitment. Each year a 1-month survey of this population and its pelagic environment is undertaken. Among the descriptors of ecosystem function characterized, mesozooplankton aspartate transcarbamylase (ATC) activity is measured with the goal of defining overall productivity of the mesozooplankton communities. Diverse physical forcing factors are responsible for the enhancement of productivity in the Bay of Biscay, and their...
Tipo: Text Palavras-chave: Aspartate transcarbamylase; Anchovy biomass; Breeding season; Mesozooplankton; Pelagic fisheries; Bay of Biscay.
Ano: 2013 URL: http://archimer.ifremer.fr/doc/00128/23889/21849.pdf
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Manual of fisheries survey protocols. PELGAS surveys (PELagiques GAScogne) ArchiMer
Doray, Mathieu; Badts, Vincent; Masse, Jacques; Duhamel, Erwan; Huret, Martin; Doremus, Ghislain; Petitgas, Pierre.
The PELGAS sea cruises aim at monitoring the Bay of Biscay pelagic ecosystem, in order to provide scientific data for the implementing of an ecosystemic management of Biscay living ressources. The spatial and temporal dynamics of small pelagic fish populations are specifically monitored, with a focus on anchovy populations. The cruise hence takes place in spring, during anchovy spawning, to allow for the assessment of both eggs and adult stages. The PELGAS ecosystemic cruise aims at collecting data at each level of the Biscay trophic chain. Data are collected continuously along parallel transects covering the whole Bay of Biscay, in order to thoroughly characterize the horizontal and vertical structures of the pelagic ecosystem. Multibeam and...
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Ano: 2014 URL: http://archimer.ifremer.fr/doc/00191/30259/28714.pdf
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Pelagic survey series for sardine and anchovy in ICES subareas 8 and 9 — Towards an ecosystem approach ArchiMer
Masse, Jacques; Uriarte, A; Angelico, Mm; Carrera, P.
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Ano: 2018 URL: https://archimer.ifremer.fr/doc/00585/69728/67618.pdf
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Guide du chef de mission de la campagne PELGAS ArchiMer
Doray, Mathieu; Badts, Vincent; Huret, Martin; Duhamel, Erwan; Doremus, Ghislain; Masse, Jacques; Petitgas, Pierre.
L'édition des Guides du chef de mission des campagnes halieutiques vise en particulier les campagnes inscrites dans des séries de relevés pluri-annuels (campagnes benthiques, démersales et pélagiques). Mais elle concerne également toutes les campagnes halieutiques dont les données sont déposées auprès du Système d'information halieutique - campagnes à la mer. Cette documentation sur la campagne PELGAS est publiée pour répondre aux objectifs suivants : - Constituant le complément opérationnel aux manuels des protocoles des campagnes halieutiques, les Guides du chef de mission fournissent aux chefs de mission et aux équipes embarquées une documentation de base leur permettant de maîtriser l'ensemble des opérations à conduire pendant les campagnes. Ils...
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Ano: 2015 URL: http://archimer.ifremer.fr/doc/00249/36054/34604.pdf
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A partnership between science and industry for a monitoring of anchovy & sardine in the Bay of Biscay: When fishermen are actors of science ArchiMer
Masse, Jacques; Sanchez, Florence; Delaunay, Damien; Robert, J. M.; Petitgas, Pierre.
Anchovy and sardine are small pelagic species occupying similar geographic areas in the Bay of Biscay (North-East Atlantic). Their biomass is strongly dependent on recruitment, making the annual assessment of TAC (Total Allowable Catch) a risky strategy due to uncertainty in predicting the magnitude of recruitment. Monitoring these resources more often and throughout their life cycle could allow management strategies to be adjusted based on observations which indicate the level of recruitment. In order to achieve a more frequent monitoring, an innovative data collection strategy involving a partnership between fishermen and scientists, was developed in 2009 and 2010 called “pilot sentinel surveys”. This paper details the partnership, the information such a...
Tipo: Text Palavras-chave: Sporadic acoustic surveys; Bay of Biscay; Small pelagic monitoring; Recruitment indicators; Fishermen's surveys.
Ano: 2016 URL: https://archimer.ifremer.fr/doc/00301/41214/41006.pdf
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Overview of recent progress in fisheries acoustics made by Ifremer with examples from the Bay of Biscay ArchiMer
Trenkel, Verena; Berger, Laurent; Bourguignon, Sebastien; Doray, Mathieu; Fablet, Ronan; Masse, Jacques; Mazauric, Valerie; Poncelet, Cyrille; Quemener, Gael; Scalabrin, Carla; Villalobos, Hector.
This paper provides an overview of the progress Ifremer has made recently in fisheries acoustics and the study of small pelagic fish by: i) pushing observation frontiers using a range of platforms including an autonomous underwater vehicle, AUV, ii) developing measuring instruments and methods and iii) studying fish distributions. Presently, information from several frequencies of single-beam echosounders is routinely collected together with data from the ME70 multibeam echosounder. For onboard data acquisition control the HERMES software was developed. The new MOVIES 3D software includes modules for simultaneous realistic 3D visualisation and post-processing such as bottom detection, school extraction and calculation of descriptors and integration of all...
Tipo: Text Palavras-chave: Multibeam echosounder; Oceanographic AUV; Pelagic fish; Fisheries acoustics.
Ano: 2009 URL: http://archimer.ifremer.fr/doc/00000/11165/7517.pdf
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Acoustic detection of the spatial and temporal distribution of fish shoals in the Bay of Biscay ArchiMer
Scalabrin, Carla; Masse, Jacques.
Echo sounder data were used to investigate the spatio-temporal variability of shoal behaviour in the Bay of Biscay. Data collected from annual surveys were processed using MOVIES-B software in order to mcasure this variability. The software was designed to measure morphological, energetic and space-time distribution descriptors from the acoustic signal received from fish shoals. Two surveys, DAAG 90 and DAAG 91, provided the appropriate characteristics for such an analysis. The survey's objective was to obtain relative abundance indices for the anchovy (Engraulis encrasicolus) biomass in the Bay of Biscay. The surveys were carried out in the same area (southern Bay of Biscay), at the same period (April) within one year interval (1990 and 1991), using the...
Tipo: Text Palavras-chave: Fish shoal; Fisheries acoustics; Bay of Biscay; Pelagic fish.
Ano: 1993 URL: http://archimer.ifremer.fr/doc/00190/30111/28580.pdf
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Hydro-plankton characteristics and their relationship with sardine and anchovy distributions on the French shelf of the Bay of Biscay ArchiMer
Petitgas, Pierre; Masse, Jacques; Bourriau, Paul; Beillois, Pierre; Bergeron, Jean-pierre; Delmas, Daniel; Herbland, Alain; Koueta, Noussithe; Froidefond, Jean-marie; Santos, Maria.
The spatial pattern in hydro-plankton and fish distributions and their relationship were analysed based on the spring 2000 fisheries acoustic survey. The importance of this survey was that it was a multi-disciplinary platform which collected an extensive set of parameters in the hydro-plankton leading to a potentially finer description of hydro-plankton conditions and fish habitats. More than 50 variables were measured on a grid of stations, in four compartments of the ecosystem: hydrology, nutrients, primary producers and meso-zooplankton. First, a joint analysis of all hydro-plankton compartments was performed using multiple factor analysis (MFA). The method was used to estimate a compromise factorial space common to all compartments in which the...
Tipo: Text Palavras-chave: Fish environment relationship; Hydro plankton; Habitats; Multiple factor analysis; Spatial pattern.
Ano: 2006 URL: http://archimer.ifremer.fr/doc/2006/publication-3961.pdf
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Variability and controls of otolith growth in the anchovy of the Bay of Biscay ArchiMer
Petitgas, Pierre; Grellier, Patrick; Duhamel, Erwan; Masse, Jacques; Doray, Mathieu.
Individual fish growth depends on internal population factors such as phenotypic variability as well as external factors such as past environmental conditions (temperature, food) and selective mortality (predation or fishing). In the anchovy, growth in the first year is key to population dynamics as it determines the potential energy allocated to reproduction as well as the capacity to occupy off-shore habitats. Further, in the recent past, the anchovy in the bay of Biscay has experienced collapse and recovery and the role played by growth in this history is unknown. Since 2001 with the spring acoustic survey series PelGas, we have monitored individual fish growth by measuring in the otolith the increments between annual rings, in addition to age...
Tipo: Text Palavras-chave: Anchovy; Biscay; Otoliths; Growth; Metapopulation.
Ano: 2012 URL: http://archimer.ifremer.fr/doc/00114/22550/20236.pdf
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Fifteen years of data from the PELGAS integrated survey (2000-2015): what have we learned on the Bay of Biscay pelagic ecosystem? ArchiMer
Doray, Mathieu; Petitgas, Pierre; Romagnan, Jean-baptiste; Huret, Martin; Duhamel, Erwan; Dupuy, Christine; Spitz, Jérôme; Authier, Matthieu; Berger, Laurent; Doremus, Ghislain; Bourriau, Paul; Grellier, Patrick; Masse, Jacques; Sanchez, Florence.
The initial focus of the PELGAS integrated survey was to assess the small pelagic fish biomass in the Bay of Biscay in springtime, for fisheries management purposes. Sampling has been extended to produce long-term time-series of spatially-explicit data and indices, describing the main pelagic ecosystem components: hydrology, phytoplankton, mesozooplankton, fish and megafauna. A collaborative analysis of these datasets has brought new insights on the Bay of Biscay pelagic ecosystem summarized here. New results on single ecosystem components include an analysis of water samples to groundtruth the results of an ocean color algorithm aiming at detecting phytoplanktonic coccolithophores. New insights on mesozooplankton spatio-temporal distribution and energy...
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Ano: 2018 URL: http://archimer.ifremer.fr/doc/00445/55665/57331.pdf
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Prospection germonière 1985 : premières marées, Grand-Ouest, zone traditionnelle : remarques sur l'aide à la pêche germonière ArchiMer
Liorzou, Bernard; Leroy, Claude; Masse, Jacques.
Les cartes de températures de surface établies au Centre de Météorologie Spatiale (CMS) au cours de la campagne germonière 1984 avaient montré la persistance de fronts thermiques au-delà de 30° ouest (fig. 1 et 2). Ces fronts, qui sont la conséquence de la rencontre entre les eaux froides issues du courant du labrador et les eaux chaudes de la dérive nord atlantique (extension du Gulf Stream), sont particulièrement prononcés dans le sud-est de Terre Neuve. Leur intensité décroît d'ouest d’ouest et à l'est du 30ème méridien on peut considérer qu'ils ne sont plus permanents (à la saison considérée). Les thermographies satellitaires ont montré l'aspect tourbillonnaire de ces zones de contact avec des incursions froides dans les eaux chaudes et inversement....
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Ano: 1985 URL: http://archimer.ifremer.fr/doc/00305/41592/40801.pdf
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Situation en 2011 des ressources exploitées par les flottilles françaises ArchiMer
Biseau, Alain; Bellail, Robert; Bertignac, Michel; Biais, Gerard; Bigot, Jean-louis; Bouche, Ludovic; Bourjea, Jerome; Caro, Anthony; De Casamajor, Marie-noelle; Caill-milly, Nathalie; Drogou, Mickael; Duhamel, Erwan; Fifas, Spyros; Foucher, Eric; Fromentin, Jean-marc; Jadaud, Angelique; Lampert, Luis; Laurans, Martial; Lissardy, Muriel; Lorance, Pascal; Mahe, Jean-claude; Mahe, Kelig; Masse, Jacques; Morandeau, Gilles; Pawlowski, Lionel; Poisson, Francois; Reynal, Lionel; Roos, David; Verin, Yves; Vermard, Youen; Vigneau, Joel.
Ce document présente l'état des principaux stocks exploités par les flottes françaises en termes de mortalité par pêche et de biomasse de reproducteurs. La situation fin 2010 (début 2011) par rapport aux points de référence (de précaution et Fmsy) est indiqué lorsque les indicateurs sont estimés et que les références sont définies. Les grandes tendances en matière d'évolution des mortalités et biomasses sont également indiquées.
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Ano: 2011 URL: http://archimer.ifremer.fr/doc/00035/14656/11956.pdf
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Assessing natural mortality of Bay of Biscay anchovy from survey population and biomass estimates ArchiMer
Uriarte, Andres; Ibaibarriaga, Leire; Pawlowski, Lionel; Masse, Jacques; Petitgas, Pierre; Santos, Maria; Skagen, Dankert.
La fermeture de la pêche de l’anchois (Engraulis encrasicolus) du Golfe de Gascogne entre 2005 et 2010, en raison de la faible biomasse du stock, a été une opportunité pour estimer la mortalité naturelle à partir de données de campagnes halieutiques issues de l’observation de la présence d’oeufs (DEPM) et de mesures acoustiques, utilisées pour l’évaluation de cette population depuis 1987. En considérant que la mortalité naturelle est constante au cours du temps et que la capturabilité des deux campagnes est identique pour tous les âges, la mortalité naturelle peut être estimée par des modèles log-linéaires appliquées aux séries temporelles de nombres aux âges issues des campagnes, et par des modèles d’évaluations de stock prenant en compte la saison....
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Ano: 2016 URL: http://archimer.ifremer.fr/doc/00334/44510/45923.pdf
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Investigating the coupling between small pelagic fish and marine top predators using data collected from ecosystem-based surveys ArchiMer
Certain, G.; Masse, Jacques; Van Canneyt, O.; Petitgas, Pierre; Doremus, G.; Santos, M. B.; Ridoux, Vincent.
The present study is a general multivariate analysis of the spatial association between small pelagic fishes and their predators (seabirds, marine mammals and fisheries), using 6 yr (18000 km) of transects surveyed in spring in the Bay of Biscay, France. We describe 4 groups of prey-predator association, with explicit distinction of prey size: (1) terns and anchovies (10 to 15 cm), (2) common dolphins, common murres, sprat and sardine (<20 cm), (3) gannets, horse mackerel and mackerel (15 to 25 cm) and (4) bottlenose dolphin, horse mackerel and mackerel (25 to 40 cm). Our analysis also illustrates the great variability in these associations, with years of strong prey-predator associations followed by years of weak relationships. The analysis allows us...
Tipo: Text Palavras-chave: Marine top predators; Small pelagic fishes; Spatial associations; Temporal variability; Pelagic ecosystem; Bay of Biscay.
Ano: 2011 URL: http://archimer.ifremer.fr/doc/00031/14257/11540.pdf
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Sardine series in PELGAS surveys : PELGAS 2000 to 2005 ArchiMer
Masse, Jacques; Duhamel, Erwan; Delaunay, Damien.
Survey data from 2000 to 2004 were used to analyse whether sardine show a preferential distribution in relation to bottom depth and/or latitude. For this analysis, four strata were considered; North or South of latitude 46°N (separating VIIIa and VIIIb) and bottom depths deeper or shallower than 110m. Sardine length distributions are plotted as the proportion of small (< 18.5 cm) or big (larger than 18.5 cm) fish on the samples over the years. This division was chosen to take into account the bimodal structure of sardine length distributions (usually with a "valley" at 18.5 cm fish length). Small fish (mainly 1 year old) are generally found close to the coast and preferentially in the southern part. The year 2003 is different to the others but this year...
Tipo: Text Palavras-chave: Assessment; Sardine; Bay of Biscay; Acoustic; Survey; ICES; PELGAS; Estimation de stock; Sardine; Golfe de Gascogne; Acoustique; Campagne océanographique; CIEM; PELGAS.
Ano: 2005 URL: http://archimer.ifremer.fr/doc/2005/acte-2294.pdf
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Combining acoustic and CUFES data for the quality control of fish-stock survey estimates ArchiMer
Petitgas, Pierre; Goarant, Anne; Masse, Jacques; Bourriau, Paul.
Petitgas, P., Goarant, A., Masse, J., and Bourriau, P. 2009. Combining acoustic and CUFES data for the quality control of fish-stock survey estimates. - ICES Journal of Marine Science, 66: 1384-1390.
Tipo: Text Palavras-chave: CUFES; Biscay; Bias; Anchovy; Acoustics; Abundance.
Ano: 2009 URL: http://archimer.ifremer.fr/doc/2009/publication-6566.pdf
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Reliability of species identification from mid-water trawl catches during acoustic surveys : a catchability study ArchiMer
Masse, Jacques; Guiho, Nicolas.
Objective echoes identification is not possible nowadays when several species are present in an area. Mid-water trawl catches are usually used to split fish schools into species during acoustic surveys. Moreover it is weIl known that because of a lively behaviour of these types of species, the catchability may vary a lot from one species to another. Therefore, in order to verify the reliability of identification by trawling, 68 hauls carried out during 4 acoustic surveys (1991-1994) have been analysed. Five pelagic species (anchovy, mackerel, horse-mackerel, sprat and sardine), observed during these surveys in Bay of Biscay were considered. On the one hand, taking into account the vertical echo-sounder data and the vertical course of the trawl from nets...
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Ano: 1996 URL: http://archimer.ifremer.fr/doc/00203/31438/29834.pdf
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Point sommaire sur la biologie et les caractéristiques de la pêcherie de sardine Atlantique (Sardina pilchardus pilchardus) du golfe de Gascogne ArchiMer
Prouzet, Patrick; Masse, Jacques.
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Ano: 1999 URL: http://archimer.ifremer.fr/doc/00304/41570/40778.pdf
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Modelling the variability in fish spatial distributions over time with empirical orthogonal functions: anchovy in the Bay of Biscay ArchiMer
Petitgas, Pierre; Doray, Mathieu; Huret, Martin; Masse, Jacques; Woillez, Mathieu.
Characterizing the space–time variability in spatial distributions as well as understanding its drivers is basic to designing robust spatial management plans. As a prerequisite, we analyse here how this variability relates to population dynamics in conjunction with environmental conditions. For that, spatio-temporal statistical approaches are needed but seldom used in fisheries science. To fill this gap, we showcase the usefulness of the method of empirical orthogonal functions (EOFs). Guidelines are given to apply the method on a series of gridded maps as derived from fisheries survey dataseries that now span over decades. The method is applied to the series, 2000–2012, of the spatial distributions of European anchovy in the Bay of Biscay at spawning...
Tipo: Text Palavras-chave: Anchovy; Bay of Biscay; Density-dependence; EOF; Habitat; Spatial distribution.
Ano: 2014 URL: https://archimer.ifremer.fr/doc/00222/33365/31907.pdf
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Direct assessment of anchovy by the PELGAS05 acoustic survey ArchiMer
Masse, Jacques; Beillois, Pierre; Duhamel, Erwan.
An acoustic survey was carried out in the bay of Biscay from May 3rd to June 1st on board the French research vessel Thalassa. The objective of PELGAS05 survey was to study the abundance and distribution of pelagic fish in the Bay of Biscay. The target species were mainly anchovy and sardine and were considered in a multi-specific context. The results have to be used during ICES working groups in charge of the assessment of sardine, anchovy, mackerel and horse mackerel and in the frame of the Ifremer fisheries ecology program "resources variability".
Tipo: Text Palavras-chave: Assessment; Bay of Biscay; CUFES; Anchovy; Acoustic; Survey; ICES; PELGAS; Estimation de stock; Golfe de Gascogne; CUFES; Anchois; Acoustique; Campagne oceanographique; CIEM; PELGAS.
Ano: 2005 URL: http://archimer.ifremer.fr/doc/2005/acte-2293.pdf
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