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| Registros recuperados: 112 | |
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| Lupo, Coralie; Osta Amigo, Axel; Marce, Clara; Prou, Jean. |
| Aquatic animal health surveillance is notably based on the observation of any increased shellfish mortality by shellfish farmers and its immediate mandatory notification to the local competent authority. According to current EU regulation, increased mortality is defined using a participatory approach: case reporting is based on individual farmer perception, which then can be turned into notification in cooperation between the farmer and the competent authority. All the challenge relies on starting from individual perception and knowledge of increased mortality to a collective alert onset informing potential control actions having a community interest. We made an inventory of the criteria used by surveillance stakeholders to define and detect increased... |
| Tipo: Text |
Palavras-chave: Aquatic animal surveillance; Mortality; Shellfish; Early warming surveillance; Case definition. |
| Ano: 2014 |
URL: http://archimer.ifremer.fr/doc/00195/30600/29057.pdf |
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| Mazurie, Joseph. |
| The 14th International Conference on Shellfish Restoration (ICSR) comes this year to the United Kingdom for the first time in its 26 years history. The conference will be held at the University of Stirling in the heart of Scotland and its title and theme will be “Shellfish: our undervalued resource”. The theme of the conference, “Shellfish: our undervalued resource”, reflects the UK perception of shellfish as something that is good to eat, often in upmarket restaurants. Shellfish fisheries and aquaculture are indeed a very important part of the UK economy; shellfish reefs however form an ecosystem that provides myriad benefits (“ecosystem services”) many of which have been lost through acute fishing pressures, disease, pollution and other factors. On a... |
| Tipo: Text |
Palavras-chave: Coquillages; Restauration; Récif; Chesapeake; Crassostrea; Service écosystémique; Shellfish; Restoration; Reefs; Chesapeake; Wadden Sea; Marine; Crassostrea. |
| Ano: 2011 |
URL: http://archimer.ifremer.fr/doc/00045/15590/12992.pdf |
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| Ben Haddouch, Asia; Amanhi, Rachid; Amzil, Zouher; Taleb, Hamib; Rovillon, Georges-augustin; Adly, Farida; Loutfi, Mohammed. |
| Forthe Moroccan Phycotoxins Monitoring that is part of theSafety of theCoastal Monitoring Network(RSSL),shellfish sampleswereharvestedfromdifferentlocations at NorthAtlantic of Morocco whereharmful algaeblooms were known to have occurred. Forallshellfishsamples found positive by themouse bioassay fordiarrheicshellfishpoisoning(DSP)toxins,liquid chromatography coupled to tandem massspectrometry(LC-MS-MS) in order to search thefollowinglipophilictoxins: okadaic acid (OA), dinophysistoxins(DTXs), pectenotoxins(PTXs), azaspiracids(AZAs), yessotoxins(YTXs), spirolides(SPXs) and gymnodimines (GYMs).Theresultsrevealeddifferentlipophilictoxinprofiles as a function of theshellfish sampling location. It has beennoticed that allthesamples contained OA and its... |
| Tipo: Text |
Palavras-chave: Diarrheictoxins; Lipophilic toxins; LC-MS/MS; Mouse test; Shellfish. |
| Ano: 2017 |
URL: http://archimer.ifremer.fr/doc/00372/48342/48495.pdf |
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| Le Guyader, Soizick; Atmar, Robert; Maalouf, Haifa; Le Pendu, Jacques. |
| Shellfish can be a vector for human pathogens. Despite regulation based on enteric bacteria, shellfish are still implicated in viral outbreaks. Oysters are the most common shellfish associated with outbreaks, and noroviruses, which cause acute gastroenteritis, are the most frequently identified pathogen in these outbreaks. Analysis of shellfish-related outbreak data worldwide shows an unexpected high proportion of NoV GI strains. Recent studies performed in vitro, in vivo and in the environment indicate that oysters are not just a passive filter, but can selectively accumulate norovirus strains based on virus carbohydrate ligands shared with humans. These observations may help explain the GI/GII bias observed in shellfish-related outbreaks compared to... |
| Tipo: Text |
Palavras-chave: Shellfish; Noroviruses; Oyster contamination; Pathogen. |
| Ano: 2013 |
URL: http://archimer.ifremer.fr/doc/00150/26093/24313.pdf |
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| Baliere, Charlotte. |
| The contamination of coastal areas by potentially pathogenic enteric bacteria is of concern for the sustainability of some uses, such as shellfish farming, recreational shellfish harvesting and bathing. The contamination of these environments may occur through the land-spreading of livestock wastes, animal feces deposited on pastures, wastewaters from slaughterhouses or from municipal wastewater treatment plants. The presence of these bacteria in coastal environment may present a potential risk to human health. In fact, shellfish-borne outbreaks or human infections may occur by the consumption of shellfish from contaminated areas or the ingestion of water during bathing in contaminated waters, respectively. To date, few studies focusing on the presence and... |
| Tipo: Text |
Palavras-chave: STEC; EPEC; Coquillages; Diversité; Virulence; Persistance; STEC; EPEC; Shellfish; Diversity; Virulence; Persistence. |
| Ano: 2016 |
URL: http://archimer.ifremer.fr/doc/00312/42322/41653.pdf |
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| Mauffret, Aourell; Mieszkin, Sophie; Morizur, Mael; Alfiansah, Yustian Rovi; Lozach, Solen; Gourmelon, Michele. |
| We assessed the capacity of real-time PCR markers to identify the origin of contamination in shellfish. Oyster, cockles or clams were either contaminated with fecal materials and host-associated markers designed from Bacteroidales or Catellicoccus marimammalium 16S RNA genes were extracted from their intravalvular liquid, digestive tissues or shellfish flesh. Extraction of bacterial DNA from the oyster intravalvular liquid with FastDNA spin kit for soil enabled the selected markers to be quantified in 100% of artificially contaminated samples, and the source of contamination to be identified in 13 out of 38 naturally contaminated batches from European Class B and Class C areas. However, this protocol did not enable the origin of the contamination to be... |
| Tipo: Text |
Palavras-chave: Microbial source tracking; Shellfish; Bacteroidales; Real-time PCR; Intravalvular liquid; Digestive tissues. |
| Ano: 2013 |
URL: http://archimer.ifremer.fr/doc/00137/24776/25188.pdf |
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| Geiger, Marie; Guitton, Yann; Vansteelandt, M.; Kerzaon, I.; Blanchet, Estelle; Du Pont, T. Robiou; Frisvad, J. C.; Hess, Philipp; Pouchus, Y. F.; Grovel, Olivier. |
| In order to assess the putative toxigenic risk associated with the presence of fungal strains in shellfish-farming areas, Penicillium strains were isolated from bivalve molluscs and from the surrounding environment, and the influence of the sample origin on the cytotoxicity of the extracts was evaluated. Extracts obtained from shellfish-derived Penicillia exhibited higher cytotoxicity than the others. Ten of these strains were grown on various media including a medium based on mussel extract (Mytilus edulis), mussel flesh-based medium (MES), to study the influence of the mussel flesh on the production of cytotoxic compounds. The MES host-derived medium was created substituting the yeast extract of YES medium by an aqueous extract of mussel tissues, with... |
| Tipo: Text |
Palavras-chave: Cytotoxicity; Dereplication; Marine fungi; Mass spectrometry; Penicillium; Shellfish. |
| Ano: 2013 |
URL: http://archimer.ifremer.fr/doc/00160/27166/25523.pdf |
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| Le Guyader, Soizick; Loisy, Fabienne; Atmar, R; Hutson, A; Estes, M; Ruvoen-clouet, N; Pommepuy, Monique; Le Pendu, J. |
| The primary pathogens related to shellfishborne gastroenteritis outbreaks are noroviruses. These viruses show persistence in oysters, which suggests an active mechanism of virus concentration. We investigated whether Norwalk virus or viruslike particles bind specifically to oyster tissues after bioaccumulation or addition to tissue sections. Since noroviruses attach to carbohydrates of the histo-blood group family, tests using immunohistochemical analysis were performed to evaluate specific binding of virus or viruslike particles to oyster tissues through these ligands. Viral particles bind specifically to digestive ducts (midgut, main and secondary ducts, and tubules) by carbohydrate structures with a terminal N-acetylgalactosamine residue in an alpha... |
| Tipo: Text |
Palavras-chave: Bioaccumulation; Shellfish; Escherichia coli; Pathogen; Oyster digestive tissue; Noroviruses. |
| Ano: 2006 |
URL: http://archimer.ifremer.fr/doc/2006/publication-1542.pdf |
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| Elamri, D; Aouni, M; Parnaudeau, Sylvain; Le Guyader, Soizick. |
| Aims: The aim of this study was to detect the main pathogenic human RNA enteric viruses able to persist in the environment such as astrovirus, enterovirus, norovirus and hepatitis A virus (HAV) in shellfish collected from two locations in northern Tunisia. Methods and Results: Viruses were eluted from digestive tissues and concentrated by polyethylene glycol precipitation before nucleic acid extraction and purification. After checking for inhibitors, all viruses were detected by reverse transcription-polymerase chain reaction (RT-PCR) and confirmed by hybridization. Overall, 83% of the samples were found positive for at least one virus. Astrovirus was detected in 61% of the samples, norovirus in 35% and HAV in 26%. Surprisingly, only one sample was found... |
| Tipo: Text |
Palavras-chave: Shellfish; Reverse transcription PCR; Human enteric viruses. |
| Ano: 2006 |
URL: http://archimer.ifremer.fr/doc/2006/publication-1881.pdf |
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| Lupo, Coralie; Angot, J.-l.. |
| Seafood could be a solution to meet global food demand that will double by 2050. Seafood includes a wide variety of edible marine organisms, except fish and mammals. These are molluscs, crustaceans, echinoderms and algae. Like any food, seafood can involve hazards transmitted to humans through food, which affect the health of the consumer. These hazards are both biological (viruses, bacteria, parasites) and chemical (toxins, allergens, chemicals, microplastics). The exposure of populations to these hazards through seafood consumption can be notably explained by their mode of production and the dietary habits. Firstly, the sanitary quality of products reflects the quality of the aquatic environment from which they are taken, which can be contaminated by... |
| Tipo: Text |
Palavras-chave: Crustacea; Food safety; Mollusca; Seaweed; Shellfish. |
| Ano: 2020 |
URL: https://archimer.ifremer.fr/doc/00656/76812/77984.pdf |
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| Garcia, Celine; Mesnil, Aurelie; Tourbiez, Delphine; Moussa Pouly, Mirna; Dubreuil, Christine; Gonçalves De Sa, Amélie; Chollet, Bruno; Godfrin, Yoann; Dégremont, Lionel; Serpin, Delphine; Travers, Marie-agnes. |
| Cockle mortality events have been reported in northern France since 2012. In the present study, we describe and investigate the implication of a potential bacterial causative agent in cockle mortality. Bacteria isolated from five different cockle mortality events were characterized and studied. Using phenotypic analysis combined with DNA–DNA hybridization (DDH) and whole genome sequencing, the isolates were shown to belong to Vibrio aestuarianus , a species regularly detected in France during oyster mortality events. Comparison of the strains from cockles with strains from French oysters and the type strain showed that the strains from cockles were genetically different to those from oysters and also different to the V. aestuarianus type strain. Moreover,... |
| Tipo: Text |
Palavras-chave: Bacterial pathogen; Bivalvia; Cockle; Mortality; Shellfish; Vibrio aestuarianus. |
| Ano: 2021 |
URL: https://archimer.ifremer.fr/doc/00677/78893/81195.pdf |
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| Brind'Amour, Anik; Rochet, Marie-joelle; Ordines, Francesc; Hosack, Geoff; Berthele, Olivier; Merigot, Bastien; Carbonara, Pierluigi; Follesa, Maria Cristina; Jadaud, Angelique; Lefkaditou, Evgenia; Maiorano, Porzia; Peristeraki, Panagiota; Mannini, Alessandro; Rabiller, Manuella; Spedicato, Maria Teresa; Tserpes, George; Trenkel, Verena. |
| Functional groups are sets of species that play a similar role in a food web. We defined functional groups of fish species based on their morphological characteristics, while using expert knowledge for invertebrates. We measured 9 morphological traits of 72 fish species, and carried out multivariate analyses to assign fish species to functional groups. The analysis identified 9 trait-based fish functional groups to which were added 3 expert-based invertebrate functional groups. The habitat (position in the water column) and potential diet of each group were identified from the literature. Using the MEDITS bottom trawl survey data collected at 10 to 800 m depth, we calculated relative change in the 12 fish and invertebrate functional group biomasses for 12... |
| Tipo: Text |
Palavras-chave: Morphological traits; Community models; Functional network; Functional groups; Mediterranean Sea; Temporal trends; Fish; Shellfish. |
| Ano: 2016 |
URL: https://archimer.ifremer.fr/doc/00363/47382/47475.pdf |
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| Bertrand, Jacques; Cochard, Marie-laure; Coppin, Franck; Leaute, Jean-pierre; Lobry, Jeremy; Mahe, Jean-claude; Morin, Jocelyne; Poulard, Jean-charles; Rochet, Marie-joelle; Schlaich, Ivan; Souplet, Arnauld; Trenkel, Verena; Verin, Yves; SIH-C. |
| The integration of fishing management into the ecosystemic approach has been recommended for many years by international consultative bodies; it is also written into international conventions and agreements. The implementation of the ecosystemic approach involves the development of programmes for monitoring exploited ecosystems in order to measure the effects of management steps. Plotting the results of these observations for operational reasons requires formalizing summary performance indicators. IFREMER has carried out halieutic observation campaigns for some twenty years along the coasts of France from oceanographic ships and chartered ships. The objective of these campaigns is to produce abundance indices of species that are of halieutic interest.... |
| Tipo: Text |
Palavras-chave: Ecosystem; Indicating; Scientific survey; Scientific research; Fishing; English Channel; Bay of Biscay; France; Shellfish; Fish; Invertébrés; Poissons; Ecosystème; Indicateur; Campagne océanographique; Recherche scientifique; Pêche halieutique; Pêche; Mer du nord; Golfe de gascogne; Manche; France. |
| Ano: 2007 |
URL: http://archimer.ifremer.fr/doc/2007/rapport-2327.pdf |
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| Boude, Jp; Lesueur, M; Daures, Fabienne; Guyader, Olivier; Drouot, Bruno. |
| Leisure fishing, open to everyone and without a license, is a leisure activity in which many people are interested. Conversely to other harvesting activities such as fresh water fishing and hunting, it has practically not been studied until now (Appéré et Bonnieux, 2002). This study, dedicated to practice of leisure fishing at sea in the Gulf of Morbihan, set itself several objectives: - collect and assemble the available knowledge on regulations and practice of maritime leisure fishing - assess the amount of harvesting of certain recreational types of fishing and the economic impact generated by this activity, - highlight the problems of existing or potential cohabitations among the various users of the space and resources in the Gulf. - develop an... |
| Tipo: Text |
Palavras-chave: Economic evaluation; Shellfish; Clams; Morbihan bay; Brittany; Leisure fishing; Cout de transport; Palourdes; Interactions; Conflits d'usage; Evaluation economique; Impact sur la ressource; Reglementation; Peche en bateau; Peche de plaisance; Peche à pied; Peche de loisir; Activités de peche; Golfe du morbihan. |
| Ano: 2003 |
URL: http://archimer.ifremer.fr/doc/2003/rapport-2244.pdf |
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| Registros recuperados: 112 | |
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