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| Registros recuperados: 341 | |
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| Labry, Claire; Delmas, Daniel; Herbland, Alain. |
| Previous studies conducted on the continental shelf in the Southeast Bay of Biscay influenced by Gironde waters (one of the two largest rivers on the French Atlantic coast) showed the occurrence of late winter phytoplankton blooms and phosphorus limitation of algal growth thereafter. In this context, the importance of dissolved organic phosphorus (DOP) for both algae and bacteria was investigated in 1998 and 1999 in terms of stocks and fluxes. Within the mixed layer, although phosphate decreased until exhaustion from winter to spring, DOP remained high and phosphate monoesters made up between I I to 65% of this pool. Total alkaline phosphatase activity (APA, V-max) rose gradually from winter (2-8 nM h(-1)) to late spring (100-400 nM h-1), which was mainly... |
| Tipo: Text |
Palavras-chave: Phytoplankton; Phosphate; Gironde; DOP; Bacteria; Alkaline phosphatases. |
| Ano: 2005 |
URL: http://archimer.ifremer.fr/doc/2005/publication-608.pdf |
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| Kopf, Anna; Bicak, Mesude; Kottmann, Renzo; Schnetzer, Julia; Kostadinov, Ivaylo; Lehmann, Katja; Fernandez-guerra, Antonio; Jeanthon, Christian; Rahav, Eyal; Ullrich, Matthias; Wichels, Antje; Gerdts, Gunnar; Polymenakou, Paraskevi; Kotoulas, Giorgos; Siam, Rania; Abdallah, Rehab Z.; Sonnenschein, Eva C.; Cariou, Thierry; O'Gara, Fergal; Jackson, Stephen; Orlic, Sandi; Steinke, Michael; Busch, Julia; Duarte, Bernardo; Cacador, Isabel; Canning-clode, Joao; Bobrova, Oleksandra; Marteinsson, Viggo; Reynisson, Eyjolfur; Loureiro, Clara Magalhaes; Luna, Gian Marco; Quero, Grazia Marina; Loescher, Carolin R.; Kremp, Anke; Delorenzo, Marie E.; Ovreas, Lise; Tolman, Jennifer; Laroche, Julie; Penna, Antonella; Frischer, Marc; Davis, Timothy; Katherine, Barker; Meyer, Christopher P.; Ramos, Sandra; Magalhaes, Catarina; Jude-lemeilleur, Florence; Leopoldina Aguirre-macedo, Ma; Wang, Shiao; Poulton, Nicole; Jones, Scott; Collin, Rachel; Fuhrman, Jed A.; Conan, Pascal; Alonso, Cecilia; Stambler, Noga; Goodwin, Kelly; Yakimov, Michael M.; Baltar, Federico; Bodrossy, Levente; Van De Kamp, Jodie; Frampton, Dion M. F.; Ostrowski, Martin; Van Ruth, Paul; Malthouse, Paul; Claus, Simon; Deneudt, Klaas; Mortelmans, Jonas; Pitois, Sophie; Wallom, David; Salter, Ian; Costa, Rodrigo; Schroeder, Declan C.; Kandil, Mahrous M.; Amaral, Valentina; Biancalana, Florencia; Santana, Rafael; Pedrotti, Maria Luiza; Yoshida, Takashi; Ogata, Hiroyuki; Ingleton, Tim; Munnik, Kate; Rodriguez-ezpeleta, Naiara; Berteaux-lecellier, Veronique; Wecker, Patricia; Cancio, Ibon; Vaulot, Daniel; Bienhold, Christina; Ghazal, Hassan; Chaouni, Bouchra; Essayeh, Soumya; Ettamimi, Sara; Zaid, El Houcine; Boukhatem, Noureddine; Bouali, Abderrahim; Chahboune, Rajaa; Barrijal, Said; Timinouni, Mohammed; El Otmani, Fatima; Bennani, Mohamed; Mea, Marianna; Todorova, Nadezhda; Karamfilov, Ventzislav; Ten Hoopen, Petra; Cochrane, Guy; L'Haridon, Stephane; Bizsel, Kemal Can; Vezzi, Alessandro; Lauro, Federico M.; Martin, Patrick; Jensen, Rachelle M.; Hinks, Jamie; Gebbels, Susan; Rosselli, Riccardo; De Pascale, Fabio; Schiavon, Riccardo; Dos Santos, Antonina; Villar, Emilie; Pesant, Stephane; Cataletto, Bruno; Malfatti, Francesca; Edirisinghe, Ranjith; Silveira, Jorge A. Herrera; Barbier, Michele; Turk, Valentina; Tinta, Tinkara; Fuller, Wayne J.; Salihoglu, Ilkay; Serakinci, Nedime; Ergoren, Mahmut Cerkez; Bresnan, Eileen; Iriberri, Juan; Nyhus, Paul Anders Fronth; Bente, Edvardsen; Karlsen, Hans Erik; Golyshin, Peter N.; Gasol, Josep M.; Moncheva, Snejana; Dzhembekova, Nina; Johnson, Zackary; Sinigalliano, Christopher David; Gidley, Maribeth Louise; Zingone, Adriana; Danovaro, Roberto; Tsiamis, George; Clark, Melody S.; Costa, Ana Cristina; El Bour, Monia; Martins, Ana M.; Collins, R. Eric; Ducluzeau, Anne-lise; Martinez, Jonathan; Costello, Mark J.; Amaral-zettler, Linda A.; Gilbert, Jack A.; Davies, Neil; Field, Dawn; Gloeckner, Frank Oliver. |
| Ocean Sampling Day was initiated by the EU-funded Micro B3 (Marine Microbial Biodiversity, Bioinformatics, Biotechnology) project to obtain a snapshot of the marine microbial biodiversity and function of the world's oceans. It is a simultaneous global mega-sequencing campaign aiming to generate the largest standardized microbial data set in a single day. This will be achievable only through the coordinated efforts of an Ocean Sampling Day Consortium, supportive partnerships and networks between sites. This commentary outlines the establishment, function and aims of the Consortium and describes our vision for a sustainable study of marine microbial communities and their embedded functional traits. |
| Tipo: Text |
Palavras-chave: Ocean sampling day; OSD; Biodiversity; Genomics; Health Index; Bacteria; Microorganism; Metagenomics; Marine; Micro B3; Standards. |
| Ano: 2015 |
URL: https://archimer.ifremer.fr/doc/00371/48262/48647.pdf |
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| Caumette, P. |
| In the deepest parts of the estuarine region of Ebrie Lagoon (Abidjan Africa, (5 degree N, 4 degree W) stratified conditions have been observed during the rainy season (May to Nov.), owing to salinity differences between oxic and anoxic layers. At the interface, 3-4 m depth, phototrophic bacteria (Chromatium, Chlorobium and Pelodictyon ) developed, forming a brown layer due to their different pigments. Their production has been estimated at 41% of the total photosynthetic production during high stratification (Sep. 1981) and their biomass was used by the copepod population for 40 to 60% of its diet. During the dry season, the water column became homogeneous and oxygen was detected to 6m depth. The brown layer of phototrophic bacteria disappeared, as well... |
| Tipo: Text |
Palavras-chave: Chlorobium; Chromatium; Primary production; Photosynthesis; Estuaries; Seasonal variations; Plankton; Stratification; Vertical distribution; Bacteria; Coastal lagoons; Trophic relationships; Biomass. |
| Ano: 1984 |
URL: http://archimer.ifremer.fr/doc/1984/acte-957.pdf |
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| O'Carroll, Terence; Boulter, Mark; Seaver, Mary; Masson, Daniel; O'Driscoll, Michael; Roden, Cillian. |
| The purpose of this course is to train and familiarise people, who are going to build, have just built or are about to modernise a purification plant, in the latest technology available to the industry and also to train people so that they can effectively run a depuration centre. ln general the course aims to : - Give participants practical experience of different systems prior to committing themselves to a particular system. - Enable participants to compare systems. - Provide a minimum training qualification to run an establishment which is essentially a facility to guarantee health and safety of products to the consumer. - Provide an overview from bacteria testing to plant lay out etc. The structure of the course is in modules, morning and... |
| Tipo: Text |
Palavras-chave: Shellfish depuration; Purification; Bacteria; Viruses. |
| Ano: 1995 |
URL: http://archimer.ifremer.fr/doc/00140/25082/23192.pdf |
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| Duperron, Sebastien; Bergin, C; Zielinski, F; Blazejak, A; Pernthaler, A; Mckiness, Z; Dechaine, E; Cavanaugh, C; Dubilier, Nicole. |
| Bathymodiolus azoricus and Bathymodiolus puteoserpentis are symbiont-bearing mussels that dominate hydrothermal vent sites along the northern Mid-Atlantic Ridge (MAR). Both species live in symbiosis with two physiologically and phylogenetically distinct Gammaproteobacteria: a sulfur-oxidizing chemoautotroph and a methane-oxidizer. A detailed analysis of mussels collected from four MAR vent sites (Menez Gwen, Lucky Strike, Rainbow, and Logatchev) using comparative 16S rRNA sequence analysis and fluorescence in situ hybridization (FISH) showed that the two mussel species share highly similar to identical symbiont phylotypes. FISH observations of symbiont distribution and relative abundances showed no obvious differences between the two host species. In... |
| Tipo: Text |
Palavras-chave: Bacteria; Phylogeny; Fluorescence in situ hybridization (FISH); Methane oxidizer; Sulfur oxidizer; 16S rRNA; Endosymbiosis. |
| Ano: 2006 |
URL: http://archimer.ifremer.fr/doc/2006/publication-1864.pdf |
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| Floodgate, G.d.; Lochte, K.; Egan, B.. |
| The data obtained in surveys to investigate the bacteriological aspects of the biology of two contrasting frontal systems has shown that the Inherent homeostasis and the complexity of the environment, together with the Imprecision of the data, lead to biomass values that are difficult to interpret in terms of the physical factors governing the formation of fronts. Although biochemical measurements offer some promise of providing more reliable and less confusing information, the oeed to develop high precision methods that can be made very frequently is emphasised. |
| Tipo: Text |
Palavras-chave: Bacteria; Discontinuities; Fronts; Methodology. |
| Ano: 1982 |
URL: http://archimer.ifremer.fr/doc/00306/41742/40953.pdf |
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| Collos, Yves; Hadjadji, Imene; Plisson, Benoit; Cecchi, Philippe; Laabir, Mohamed; Bechemin, Christian; Masseret, Estelle. |
| Alexandrium tamarense (M. Lebour) Balech strains isolated in spring 2007 from a single bloom in Thau lagoon have been grown in nonaxenic artificial media. For three strains showing large oscillations in biomass (crashes followed by recoveries) on a scale of several days, a significant relationship was observed between changes in cell densities (as in vivo fluorescence) and changes in nitrate concentrations. Increases in cell densities were accompanied by decreases in nitrate, while decreases in cell densities corresponded to increases in nitrate, presumably due to nitrification. Net increases in nitrate could reach up to 15 mu mol N . L(-1) . d(-1) indicating a very active nitrifying archaeal/bacterial population. However, following population crashes,... |
| Tipo: Text |
Palavras-chave: Alexandrium tamarense; Archaea; Bacteria; Decay; Growth; Nitrate; Nitrification; Oscillations. |
| Ano: 2011 |
URL: http://archimer.ifremer.fr/doc/00049/16046/13585.pdf |
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| Le Chevanton, Myriam. |
| The use of algae-bacteria mixed culture has been suggested to improve performance of industrial microalgae culture. The present study aims to investigate impact of selected bacteria on Dunaliella sp. growth. 97 bacteria strains were isolated from a variety of marine microalgae cultures. The diversity of strains revealed members of α-and γ-proteobacteria, Cytophaga-Flavobacterium-Bacteroides and grampositive. A two-phase approach was then implemented to select bacteria that improve Dunaliella sp. growth, using an original high-throughput experimental device. Although a majority of bacteria induced performance reduction for Dunaliella sp., some resulted in significant improvements. In nitrogenlimited batch culture, the Alteromonas sp. bacteria demonstrated a... |
| Tipo: Text |
Palavras-chave: Interactions; Microalgues; Bactéries; Dunaliella; Axénie; Interactions; Microalgae; Bacteria; Dunaliella; Axenic. |
| Ano: 2013 |
URL: http://archimer.ifremer.fr/doc/00187/29839/28291.pdf |
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| Donald, Julian; Roy, Mélanie; Suescun, Uxue; Iribar, Amaia; Manzi, Sophie; Péllissier, Léonie; Gaucher, Philippe; Chave, Jérôme. |
| 1.Community assembly theory assumes that ecological communities are spatially delimited into patches. Within these patches, coexistence results from environmental filtering, competition, and immigration. Truly delineated communities exist in laboratory studies of microbial cultures in Petri dishes, yet empirical tests conducted in continuous environments often use patches defined by convention as opposed to realised boundaries. 2.Here we perform a test of ecological community assembly rules using foliar endophyte communities from a tropical rainforest, where leaves are considered as patches for both fungal and bacterial communities. We determined the diversity of fungal and bacterial endophytes using environmental DNA sequencing of 365 top‐canopy leaves,... |
| Tipo: Text |
Palavras-chave: Bacteria; Distribution; French Guiana; Fungi; Metabarcoding; Plant–pathogen interactions; Rainforest. |
| Ano: 2020 |
URL: https://archimer.ifremer.fr/doc/00606/71808/70296.pdf |
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| Maurice, Laurence. |
| The main problem of the Girond estuary is a pollution by the cadmium. During this last ten years, the good quality of the water is proved by the analysis of the main physico - chemical and biochemical parameters and bacteria. But since 1989, straight to the Blayais power station, the BOD5 varied between 2 and 3,5 mg.l-1 and a diminution of the dissolved oxygen has been observed; it's probably caused by the accumulation of biodegradable organic matter in the maximum turbidity zone during years characterized by low river flows. For average river flow, urban discharges takes part for 20 % in total fluxes of BD05; in 1991, this part attempts 35 %. During the last 7 years, the pluriannual evolution of the nitrate concentrations measured in the Garonne river... |
| Tipo: Text |
Palavras-chave: Oxygène; Sels nutritifs; Matière organique; Bactéries; Apports; Estuaire Gironde; Oxygen; Nutrients; Organic matter; Bacteria; Fluxes; Gironde estuary. |
| Ano: 1993 |
URL: http://archimer.ifremer.fr/doc/00037/14855/12178.pdf |
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| Toffin, Laurent; Bidault, Adeline; Pignet, Patricia; Tindall, Brian; Slobodkin, Alexander; Kato, Chiaki; Prieur, Daniel. |
| A novel piezotolerant, mesophilic, facultatively anaerobic, organotrophic, polarly flagellated bacterium (strain LT13a(T)) was isolated from a deep sediment layer in the Nankai Trough (Leg 190, Ocean Drilling Program) off the coast of Japan. This organism used a wide range of organic substrates as sole carbon and energy sources: pyruvate, glutamate, succinate, fumarate, lactate, citrate, peptone and tryptone. Oxygen, nitrate, fumarate, ferric iron and cystine were used as electron acceptors. Maximal growth rates were observed at a hydrostatic pressure of 10 MPa. Hydrostatic pressure for growth was in the range 0.1-50 MPa. Predominant cellular fatty acids were 16:1 omega7c, 15: 0 iso, 16: 0 and 13: 0 iso. The G + C content of the DNA was 44.9 mol%. On the... |
| Tipo: Text |
Palavras-chave: Phylogeny; Bacteria; Microbiology; Deep sediment layer. |
| Ano: 2004 |
URL: http://archimer.ifremer.fr/doc/2004/publication-590.pdf |
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| Duperron, Sebastien; Nadalig, Thierry; Caprais, Jean-claude; Sibuet, Myriam; Fiala Medioni, Aline; Amann, Rudolf; Dubilier, Nicole. |
| Deep-sea mussels of the genus Bathymodiolus (Bivalvia: Mytilidae) harbor symbiotic bacteria in their gills and are among the dominant invertebrate species at cold seeps and hydrothermal vents. An undescribed Bathymodiolus species was collected at a depth of 3,150 m in a newly discovered cold seep area on the southeast Atlantic margin, close to the Zaire channel. Transmission electron microscopy, comparative 16S rRNA analysis, and fluorescence in situ hybridization indicated that this Bathymodiolus sp. lives in a dual symbiosis with sulfide- and methane-oxidizing bacteria. A distinct distribution pattern of the symbiotic bacteria in the gill epithelium was observed, with the thiotrophic symbiont dominating the apical region and the methanotrophic symbiont... |
| Tipo: Text |
Palavras-chave: Gabon; Southeast Atlantic; Methane seep; Hydrothermal vent; Deep sea; RRNA analysis; Methane concentration; Gill epithelium; Symbiosis; Bacteria; Mytilidae. |
| Ano: 2005 |
URL: http://archimer.ifremer.fr/doc/2005/publication-1266.pdf |
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| Registros recuperados: 341 | |
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