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Review and practical use of genome mapping in aquacultured organisms. Position paper by the Working Group on the Application of Genetics in Fisheries and Mariculture (WGAGFM) ArchiMer
Boudry, Pierre; Lapegue, Sylvie; Guyomard, R..
The Working Group on the Application of Genetics in Fisheries and Mariculture (WGAGFM) met in La Rochelle, France from 10-12 March, 2003. Seven persons representing six countries were present. Three terms of reference (ToR) were addressed, while one was deferred until the appropriate information was available for review. WGAGFM first considered ToR a) Review and report on the practical use of genome mapping in aquacultured organisms. Genome maps are used extensively in the production of selected strains of agriculture plants and livestock. Studies on the genome of aquatic animais have been summarised in the WG report. Genome mapping projects in aquaculture exist for most major species and linkage maps are now becoming available. WGAGFM produced four...
Tipo: Text Palavras-chave: Conservation of genetic diversity; Triploids; Recommandation; Aquaculture; Fish; Genome mapping; Genetic.
Ano: 2003 URL: http://archimer.ifremer.fr/doc/2003/acte-3301.pdf
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Chromosome loss in tetraploid families of the Pacific oyster Crassostrea gigas ArchiMer
Mccombie, Helen; Lapegue, Sylvie; Cornette, Florence; Ledu, Christophe; Boudry, Pierre.
Alterations of chromosome number have been observed in the somatic tissue of Crassostrea gigas diploids and artificial polyploids bred in this species. Tetraploid animals with lower chromosome counts in some or all of their somatic tissue are considered undesirable as parents either for commercial triploids (produced via a cross with diploids) or for tetraploid breeding because (1) they may confer the tendency to lose chromosomes and revert to lower ploidy levels to their offspring or (2) their offspring could have a lower ploidy directly because of potential links between somatic and gametic chromosome loss. The present study evaluated the phenomenon in bi-parental tetraploid families bred from parents of differing ploidy quality, including a...
Tipo: Text Palavras-chave: Tetraploid; Chromosome; Genetic; Crassostrea gigas; Oyster.
Ano: 2003 URL: http://archimer.ifremer.fr/doc/2003/acte-3435.pdf
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Genetic improvement for disease resistance in oysters: a review ArchiMer
Degremont, Lionel; Garcia, Celine; Allen, Standish K., Jr..
Oyster species suffer from numerous disease outbreaks, often causing high mortality. Because the environment cannot be controlled, genetic improvement for disease resistance to pathogens is an attractive option to reduce their impact on oyster production. We review the literature on selective breeding programs for disease resistance in oyster species, and the impact of triploidy on such resistance. Significant response to selection to improve disease resistance was observed in all studies after two to four generations of selection for Haplosporidium nelsoni and Roseovarius crassostrea in Crassostrea virginica, OsHV-1 in Crassostrea gigas, and Martelia sydneyi in Saccostrea glomerata. Clearly, resistance in these cases was heritable, but most of the studies...
Tipo: Text Palavras-chave: Disease resistance; Oyster; Selection; Pathogen; Genetic; Mortality.
Ano: 2015 URL: http://archimer.ifremer.fr/doc/00269/38049/36139.pdf
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Projet ANCRE-DMX2 : Indicateurs biologiques et écologiques pour une gestion durable des stocks de poissons DéMersauX profonds (100–700 m) d’intérêt halieutique à La Réunion ArchiMer
Roos, David; Aumond, Yoann; Huet, Jerome; Bruchon, Franck.
L'usage de la ligne à main mécanisée (moulinet électrique) s'est développé à La Réunion au cours des années 2000. Ce métier s’est développé à la suite d’une campagne de prospection des ressources halieutiques profondes (200-700m), menée conjointement par le CRPMEM et l’Ifremer en 2000. L’objectif de cette campagne par pêche au moulinet électrique visait à identifier de nouvelles ressources démersales à des fins de diversification pour la petite pêche artisanale côtière professionnelle réunionnaise. Ainsi, les premiers résultats de cette étude avaient mis en évidence l'existence de nouvelles espèces et des stocks encore peu exploités à l’époque. Leur exploitation par la pêche professionnelle mais aussi par la pêche plaisancière s’est dès lors développée...
Tipo: Text Palavras-chave: Poissons démersaux; Pêche profonde; La Réunion; Pêche artisanale côtière; Indicateurs biologiques et écologiques; Stock halieutique; Lutjanidae; Bramidae; Epinephelidae; Squalidae; Ligne à main mécanisée; Isotopes stables; Contenus stomacaux; Génétique; Sclérochronologie; Demersal fish; Deepwater fishery; Reunion island; Artisanal fishery; Bio-ecological indices; Fish stock; Lutjanidae; Bramidae; Epinephelidae; Squalidae; Electric reel fishing gear; Isotopic analyses; Stomach contents; Genetic; Sclerochronology.
Ano: 2015 URL: http://archimer.ifremer.fr/doc/00347/45812/45553.pdf
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Combined functional genomics and genetic approach in oyster to identify summer mortality-resistant markers ArchiMer
Huvet, Arnaud; Lapegue, Sylvie.
The oyster Crassostrea gigas has global distribution and for the past several years the highest annual production of any freshwater or marine organism. Economic importance of oysters motivates a great deal of biological research, which provides the most immediate scientific rationales for sequencing ESTs and developing genomic tools.
Tipo: Text Palavras-chave: Environmental genomics; Comparative genomics; Functional genomics; Markers; Summer mortalities; Genetic; Oysters; Crassostrea gigas.
Ano: 2008 URL: http://archimer.ifremer.fr/doc/2008/publication-4006.PDF
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Using a satellite DNA family for species identification of commercial oysters ArchiMer
Lopez-flores, I.; De La Herran, R.; Garrido-ramos, M. A.; Boudry, Pierre; Ruiz-rejon, C.; Ruiz-rejon, M..
The cultivation of oyster presents some problems related with the identification and differentiation of species as Ostrea edulis (European flat oyster) with respect to Ostrea stentina (Provence oyster) or Crassostrea angulata (portuguese oyster). Crossostrea gigas (Pacific oyster). We have characterized a satellite DNA family and used it as a molecular marker for genetic differentiation between commercial and non-commercial oyster species present in Europe. This marker clearly supports a high degree of differentiation between O. edulis and O. stentina and conversely upholds the contention that C. gigas and C. angulata are the same species.
Tipo: Text Palavras-chave: Satellite DNA; Ostres stentina; Ostrea edulis; Genetic; Crassostrea angulata; Crassostrea gigas; Oysters.
Ano: 2004 URL: http://archimer.ifremer.fr/doc/2004/acte-3484.pdf
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Response to divergent selection for resistance to summer mortality in Pacific oyster spat : genetic parameters and correlated responses with subsequent survival and growth ArchiMer
Boudry, Pierre; Bedier, Edouard; Ernande, Bruno; Degremont, Lionel.
The multidisciplinary program "MOREST" aims to improve our understanding of causes of summer mortality in Crassostrea gigas juveniles in France and to reduce its impact on oyster production. As part of this program, four successive generations of families were bred between 2001 and 2005 in our research hatchery in La Tremblade. Survival and growth were recorded in the field in three sites along the French coast (Ronce, Rivière d'Auray and Baie des Veys). The first generation (44 full-sib families nested within 17 half-sib families) was tested during summer 2001 to assess to what extent genetic variability exists for spat survival. An important genetic basis was found (estimated narrow-sense heritability among sites = 0.83 ± 0.40). In contrast, lower...
Tipo: Text Palavras-chave: Survival; Growth; Genetic parameters; Summer mortality; Selection; Genetic; Crassostrea gigas; Pacific oysters.
Ano: 2006 URL: http://archimer.ifremer.fr/doc/2006/acte-3458.pdf
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Etude de la variabilité génétique de populations naturelles d'huîtres creuses Crassostrea gigas (Thunberg) du littoral Atlantique Français ArchiMer
Gras, Marie-paule; Gras, Paul.
The aductor muscle proteins of Japaneses oysters C. gigas collected from three different geographical wild stocks were studied by acrylamid gel electrophoreseis. The first results reveal a biochemical polymorphism of a protein fraction
Tipo: Text Palavras-chave: Crassostrea gigas; Oysters; Genetic; Polymorphism; Genetic population; Crassostrea gigas; Huîtres; Génétique; Polymorphisme; Populations naturelles.
Ano: 1982 URL: http://archimer.ifremer.fr/doc/1982/acte-2952.pdf
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Initialism as a mechanism of weed interference: can a crop plant be blinded? Planta Daninha
Vidal,R.A.; Trezzi,M.M.; Kozlowski,L.A.; Prates,M.V.B.; Cieslik,L.F.; Merotto Jr.,A..
Initialism is a new word proposed to indicate the "shade-avoidance syndrome". Plants detect the presence of neighbor plants very early in the growing season through changes in light quality. They modify the allocation of photosynthesis products privileging shoot growth over the roots. One of the hypotheses of the authors is that, when weed management is timely scheduled, a "blind" crop could be more productive because it would avoid an imbalance on the shoot:root ratio (S:R). Two strategies were developed to test this hypothesis: a) to use the classical Yoda's Law to screen several crops for insensitivity to S:R imbalance; b) to evaluate several growth regulators to control the plant responses to crowding. Experimental results confirm that both strategies...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Initialism; Shade-avoidance syndrome; Genetic; Growth regulator.
Ano: 2012 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0100-83582012000300002
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Breeding and feeding pigs in Australia and Vietnam AgEcon
Tisdell, Clement A.; Wilson, Clevo.
This report establishes that ACIAR Research Project AS2/1994/023, ‘Breeding and feeding pigs in Australia and Vietnam’ (supported by ACIAR from July 1995 to the end of 2000) has yielded an extraordinarily high rate of economic return on the funds invested. The collaborating agencies were the Department of Primary Industries, Queensland, James Cook University and The University of Queensland in Australia, and the Institute of Agricultural Sciences of South Vietnam in Vietnam. The best estimate benefit–cost ratio for investment in this project is at least 159:1 with a corresponding internal rate of return of 900% and a net present value of A$496 million. This is a total value, not an annual value. To give context to the number A$496 m, in 2000, 1.3 million...
Tipo: Book Palavras-chave: Pig; Vietnam; Australia; Breeding; Feeding; High rate of return; High impact; High economic return; DPI QLD; James Cook University; University of QLD; Institute of Agricultural Sciences of South Vietnam; Benefit-cost ratio; Net present value; Internal rate of return; Significant returns; Genetic; Nutrition; Pork; Agribusiness; Farm Management; Food Consumption/Nutrition/Food Safety; International Development; Livestock Production/Industries; Production Economics.
Ano: 2001 URL: http://purl.umn.edu/47695
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Morphological genetic markers for selection of broiler lines Rev. Bras. Ciênc. Avic.
Schmidt,GS; Coutinho,LL; Figueiredo,EAP de; Ledur,MC; Alves,HJ.
Two paternal broiler lines (LL and LLc, originated from the same stock in 1998) of Embrapa Suinos e Aves genetic program were used. Line LL had been selected for eight generations for rapid growth while LLc had been mated randomly, without selection, as a control line. In the last generation, 30 males and 240 females were used in hierarchical matings with pedigree control to determine sire effect. The same number of birds were used, but matings were at random for LLc. Eggs of both lines were incubated and embryos were collected in different development stages (40, 45, 50, 55 and 60 hours after setting) in order to determine somite number (NOS). The number of evaluated embryos were 1,967 and 498 for LL and LLc, respectively. This study aimed to determine...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Genetic; Heritability; Selection; Somite.
Ano: 2003 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1516-635X2003000300003
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อิทธิพลของสภาพแวดล้อมต่อความแปรปรวนของลักษณะประจำพันธุ์ข้าวไม่ไวต่อช่วงแสง Thai Agricultural
Charun Khawhnuna; Anchalee Prasertsak.
Research was conducted in order to study the environmental effects on characteristic variation in the photoperiod sensitive rice varieties at Nakhon Si Thammarat Rice Research Center during 2011-2013. Rice varieties in the study were included Pathum Thani 1, Phitsanulok 2, RD31 and RD41. Results showed that rice grown in April having plant height, number of tillers per hill, number of panicles per hill and panicle length more than rice grown in January and July. The number of filled grains and yields were highest when grew in January. Rice grown in April had high percentage of unfilled grains. The influence of other climatic conditions did not show obviously effect on the growth of rice varieties in the study.
Tipo: PhysicalObject Palavras-chave: Genetic; Variation; Morphology; Environment; Characteristic variation; Rice seeds; Seed production; Photoperiod insensitive rice; Rice grown; พันธุกรรม; ความแปรปรวน; สัญฐานวิทยา; สภาพแวดล้อม; ลักษณะประจำพันธุ์; เมล็ดพันธุ์ข้าว; ข้าวไม่ไวแสง; การผลิตเมล็ดพันธุ์; พันธุ์รับรอง; ปริมาณน้ำฝน; ลักษณะทางพฤกษศาสตร์; การเจริญเติบโตของพืช.
Ano: 2014 URL: http://anchan.lib.ku.ac.th/agnet/handle/001/5668
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Identification of sources of resistance in sorghum to Peronosclerospora sorghi Trop. Plant Pathol.
Barbosa,Flavia C. R; Casela,Carlos R; Pfenning,Ludwig H; Santos,Fredolino G.
The main objective of this work was to identify sources of resistance in sorghum (Sorghum bicolor) to Peronosclerospora sorghi, the causal agent of downy mildew, through the evaluation of 42 sorghum genotypes under natural infection in the field. Genotypes were planted in single row plots between two rows of the susceptible line SC283, planted 30 days before, to act as spreader rows, in two separate nurseries. The experimental design was a completely randomized block design with three replications. Sorghum genotypes CMSXS156, CMSXS157, CMSXS243, TxARG-1, 8902, 9902054, 9910032, 9910296, Tx430, QL-3, SC170-6-17, CMSXS762 and BR304 were classified as highly resistant in both nurseries. Among these, SC170-6-17 and 9910296 showed 0% systemic infection. Results...
Tipo: Info:eu-repo/semantics/other Palavras-chave: Sorghum bicolor; Diseases; Genetic; Resistance; Downy mildew.
Ano: 2005 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0100-41582005000500010
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Quantitative trait loci mapping for meat quality traits in swine chromosome 6 Arq. Bras. Med. Vet. Zootec.
Pires,A.V.; Lopes,P.S.; Guimarães,S.E.F.; Guimarães,C.T.; Gomide,L.A.M.; Benevenuto Júnior,A.A.; Carmo,F.M.S..
The current study was carried out to perform QTL mapping on swine chromosome 6 (SSC6) associated to meat quality traits. The F2 population was produced by outbreed crossing using two native Brazilian breed Piau boars and 18 commercial sows. A total of 557 F2 animals were genotyped for 13 microsatellite markers. The traits evaluated on the F2 population were: pH measured 45 minutes and 24 hours post mortem (pH 45, pH24, respectively), drip loss (DL), cooking loss (CL), total loss (TL), intramuscular fat content (IMF), objective tenderness (OT), lightness (L), redness (A), yellowness (B), hue angle (h) and chrome (c). Data were analyzed by multiple regression developed for analysis of outbreed line crosses, using the QTL Express Software. Significant QTL...
Tipo: Info:eu-repo/semantics/article Palavras-chave: QTL; Outbreed cross; Genetic; Molecular marker; Animal breeding.
Ano: 2005 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0102-09352005000500006
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Holstein white coat color and performance: phenotypic, genetic and environmental correlations Braz. J. Genet.
Becerril,Carlos M.; Wilcox,Charles J.; Guerrero,Victor M..
Correlations of measures of percentages of white coat color, five measures of production and two measures of reproduction were obtained from 4293 first lactation Holsteins from eight Florida dairy farms. Percentages of white coat color were analyzed as recorded and transformed by an extension of Box-Cox procedures. Statistical analyses were by derivative-free restricted maximum likelihood (DFREML) with an animal model. Phenotypic and genetic correlations of white percentage (not transformed) were with milk yield, 0.047 and 0.097; fat yield, 0.002 and 0.004; fat percentage, -0.047 and -0.090; protein yield, 0.024 and 0.048; protein percentage, -0.070 and -0.116; days open, -0.012 and -0.065; and calving interval, -0.007 and -0.029. Changes in magnitude of...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Holstein; Phenotypic; Genetic; Environmental.
Ano: 1996 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0100-84551996000400009
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Genetic variability of vascular endothelial growth factor and prognosis of head and neck cancer in a Brazilian population BJMBR
Ruiz,M.T.; Biselli,P.M.; Maniglia,J.V.; Pavarino-Bertelli,E.C.; Goloni-Bertollo,E.M..
Vascular endothelial growth factor (VEGF) is one of the most potent endothelial cell mitogens and plays a critical role in angiogenesis. Polymorphisms in this gene have been evaluated in patients with several types of cancer. The objectives of this study were to determine if there was an association of the -1154G/A polymorphism of the VEGF gene with head and neck cancer and the interaction of this polymorphism with lifestyle and demographic factors. Additionally, the distribution of the VEGF genotype was investigated with respect to the clinicopathological features of head and neck cancer patients. The study included 100 patients with histopathological diagnosis of head and neck squamous cell carcinoma. Patients with treated tumors were excluded. A total...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Head and neck cancer; Polymorphism; Genetic; VEGF gene.
Ano: 2010 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0100-879X2010000200002
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MicroRNAs in veterinary cardiology Ciência Rural
Wolf,Marcela; Muehlbauer,Eloísa; Sousa,Marlos Gonçalves.
ABSTRACT: The use of biomarkers is an important recent development in veterinary medicine. Biomarkers allow non-invasive quantification of substances with diagnostic and prognostic potential in several diseases. The microRNAs are small, non-coding RNAs that regulate gene expression and are expressed in different forms in many diseases. Reduced or over-expression of microRNAs showed to be part of the pathogenesis of some heart diseases in humans and animals. Diagnostic and therapeutic value of measuring microRNAs in veterinary cardiology is increased because abnormal expression can be managed by the use of antagonists (in the case of overexpression) and mimicking (in the case of underexpression). Thus, this literature review aimed to compile scientific...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Molecular biology; Genetic; Biomarker; Heart failure.
Ano: 2017 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0103-84782017000700602
Registros recuperados: 97
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