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Modélisation des blooms de Gymnodinium mikimotoï le long de la façade atlantique française : répartition spatiale ArchiMer
Loyer, Sophie; Lazure, Pascal; Gentien, Patrick; Menesguen, Alain.
In order to study the occurrence of Gymnodinium mikimotoï bloom on the French Atlantic coast, a three-dimensional model of primary production was set up. The biological model was coupled to a hydrodynamic model previously developed at Ifremer, by the intermediary of transport, diffusion and heat fluxes. The cycles of three limiting elements for the phytoplankton growth were modelised: nitrogen, phosphorus and silicon. The second phase of the study aimed at reproducing the summer dinoflagellate blooms. In this new approach a model of the species Gymnodinium mikimotoï was coupled with the previous biomass model which provides the physical and chemical environments. The study focuses on the results obtained by this specific sub-model. The parametrisation was...
Tipo: Text Palavras-chave: Turbulence; Dinoflagellés; Gymnodinium mikimotoï; Modèle; Nutriments; Turbulence; Dinoflagellate; Gymnodinium mikimotoï; Model; Nutrients.
Ano: 2001 URL: https://archimer.ifremer.fr/doc/00479/59100/61738.pdf
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Ligament, hinge, and shell cross-sections of the Atlantic surfclam (Spisula solidissima): Promising marine environmental archives in NE North America ArchiMer
Poitevin, Pierre; Thebault, Julien; Schoene, Bernd R.; Jolivet, Aurelie; Lazure, Pascal; Chauvaud, Laurent.
The Atlantic surfclam (Spisula solidissima) is a commercially important species in North American waters, undergoing biological and ecological shifts. These are attributed, in part, to environmental modifications in its habitat and driven by climate change. Investigation of shell growth patterns, trace elements, and isotopic compositions require an examination of growth lines and increments preserved in biogenic carbonates. However, growth pattern analysis of S. solidissima is challenging due to multiple disturbance lines caused by environmental stress, erosion in umbonal shell regions, and constraints related to sample size and preparation techniques. The present study proposes an alternative method for describing chronology. First, we analyzed growth...
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Ano: 2018 URL: https://archimer.ifremer.fr/doc/00444/55597/57229.pdf
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Étude sur la prolifération de la micro algue Alexandrium minutum en rade de Brest ArchiMer
Chapelle, Annie; Le Bec, Claude; Amzil, Zouher; Dreanno, Catherine; Guillou, Laure; Klouch, Khadidja; Labry, Claire; Le Gac, Mickael; Pineau-guillou, Lucia; Siano, Raffaele; Abernot, Chantal; Andrieux, Francoise; Caradec, Florian; Destombe, Christophe; Dia, A.; Doner, Anne; Duval, Julia; Gouriou, Jeremie; Lazure, Pascal; Le Brun, Luc; Le Gal, Dominique; Malestroit, Pascale; Petton, Sebastien; Plus, Martin; Quere, Julien; Savar, Veronique; Schmitt, Sophie; Terre, A.; Youenou, Agnes.
Suite à l’événement de grande ampleur d’efflorescence d’Alexandrium minutum et des toxicités associées en Rade de Brest en 2012, un projet a été élaboré avec la Région Bretagne dans le cadre du développement du port de Brest. L’Ifremer a organisé un échantillonnage dans l’estuaire de la rivière de Daoulas, zone la plus touchée en 2012, au cours des printemps-été 2013 et 2014. Un suivi de la présence d’A. minutum dans les sédiments a également été réalisé en hiver 2014. De ces suivis, des mesures réalisées au laboratoire à ce jour, des simulations du modèle Prévimer ainsi que des résultats du réseau Rephy et Velyger, il ressort que: * La rade de Brest peut aujourd’hui être considérée comme une zone à risque pour Alexandrium minutum. En effet, depuis 2012...
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Ano: 2014 URL: http://archimer.ifremer.fr/doc/00254/36487/35029.pdf
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Propriétés statistiques de la température, salinité et turbidité mesurées par la station MAREL Carnot dans les eaux côtières de Boulogne-sur-Mer (France) ArchiMer
Kbaier-ben Ismail, Dhouha; Puillat, Ingrid; Lazure, Pascal.
Dans l’environnement marin, la température, la turbidité et la salinité sont des quantités importantes pour étudier l’écosystème. Beaucoup de champs montrent la haute variabilité pour une large gamme d'échelles spatiale et temporelle. Les séries temporelles sont souvent non-linéaires et non-stationnaires. Les auteurs considèrent ici les fluctuations du niveau de la mer, la salinité, la turbidité et la température enregistrés par le système MAREL Carnot de Boulogne-sur-Mer (France), qui est une bouée amarrée équipée d'appareils de mesure physicochimiques, qui fonctionnent dans des conditions continues et autonomes. Pour réaliser des analyses statistiques et spectrales adéquates, il est nécessaire de connaître la nature de la série temporelle considérée....
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Ano: 2015 URL: http://archimer.ifremer.fr/doc/00270/38076/36202.pdf
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Advanced spectral analysis and cross correlation based on the empirical mode decomposition: application to the environmental time series ArchiMer
Ben Ismail, Dhouha Kbaier; Lazure, Pascal; Puillat, Ingrid.
Abstract—In marine sciences, time series are often nonlinear and nonstationary. Adequate and specific methods are needed to analyze such series. In this paper, an application of the Empirical Mode Decomposition method (EMD) associated to the Hilbert Spectral Analysis (HSA) is presented. Furthermore, EMD based Time Dependent Intrinsic Correlation (TDIC) analysis is applied to consider the correlation between two nonstationary time series. Four temperature time series obtained from automatic measurements in nearshore waters of the Réunion island are considered, recorded every ten minutes from July 2011 to January 2012. The application of the EMD on these series and the estimation of their power spectra using the HSA are illustrated. The authors identify...
Tipo: Text Palavras-chave: Augmented Dickey-Fuller tests; Cross correlation; Empirical mode decomposition (EMD); Hilbert spectral analysis (HSA); Hilbert-Huang transform (HHT); Stationarity; Time-dependent intrinsic correlation (TDIC); Time series; Wavelets.
Ano: 2015 URL: http://archimer.ifremer.fr/doc/00270/38077/36205.pdf
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Modification du régime des courants. Sous-région marine Golfe de Gascogne. Evaluation initiale DCSMM. ArchiMer
Lazure, Pascal.
Tipo: Text Palavras-chave: Golfe de Gascogne; Courants régionaux; Modifications; Impacts des activités marines.
Ano: 2012 URL: https://archimer.ifremer.fr/doc/00329/44047/43618.pdf
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Biophysical modelling of larval drift, growth and survival for the prediction of anchovy (Engraulis encrasicolus) recruitment in the Bay of Biscay (NE Atlantic) ArchiMer
Allain, Gwenhael; Petitgas, Pierre; Lazure, Pascal; Grellier, Patrick.
Fish recruitment is the result of the integration of small-scale processes affecting larval survival over a season and large oceanic areas. A hydrodynamic model was used to explore and model these physical-biological interaction mechanisms and then to perform the integration from individual to population scales in order to provide recruitment predictions for fisheries management. This method was applied to the case of anchovy (Engraulis encrasicolus) in the Bay of Biscay (NE Atlantic). The main data available to investigate survival mechanisms were past growth (otolith) records of larvae and juveniles sampled at sea. The drift history of these individuals was reconstructed by a backtracking procedure using hydrodynamic simulations. The relationships...
Tipo: Text Palavras-chave: Recruitment; Physical biological interactions; Individual based models; Biscay; Anchovy.
Ano: 2007 URL: http://archimer.ifremer.fr/doc/2007/publication-3422.pdf
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Modélisation couplée physique-biogéochimie du golfe de Gascogne sur la période 1971-2007 ArchiMer
Huret, Martin; Struski, Caroline; Leger, Fabien; Petitgas, Pierre; Lazure, Pascal; Sourisseau, Marc.
Une simulation 'hindcast' de la dynamique physique et biogéochimique du golfe de Gascogne a été réalisée pour la période 1971-2007 à l'aide du modèle ECO-MARS3D. Ce modèle couplant physique et biogéochimie fournit une série longue de données simulées, moyennées ou intégrées sur 3 jours (température, salinité, sels nutritifs, phytoplancton, zooplancton), qui sont ensuite utilisées pour des calculs d'indices hydrologiques 2D synthétiques (indices méso-échelle : stratification, upwellings, surface tourbillonnaire ; indices biologiques : chlorophylle-a de surface, production primaire intégrée). Nous nous proposons dans ce document de présenter la configuration et les forçages utilisés pour cette simulation, et de lister les différentes variables sauvegardées...
Tipo: Text Palavras-chave: Projet FP6 RECLAIM; Halieutique; Indices hydrologiques; Hindcast; ECO MARS3D; Modélisation couplée; Golfe de Gascogne.
Ano: 2009 URL: http://archimer.ifremer.fr/doc/2009/rapport-5164.pdf
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Large diurnal bottom temperature oscillations around the Saint Pierre and Miquelon archipelago ArchiMer
Lazure, Pascal; Le Cann, Bernard; Bezaud, Marion.
Here, we report large, near-daily oscillations of near-bottom temperatures, with ranges of up to 11.5 °C at depths of 30–60 m in September 2011 around the Saint Pierre and Miquelon archipelago (south-eastern Canada). These oscillations were detected on velocity and temperature profiles from moorings in Miquelon Bay and on an array of near-bottom temperature sensors around the archipelago. The oscillations coincided with the seasonal stratification period. In addition to their remarkable range, they exhibited a near-diurnal period centred on the O1 tidal component (~26 h), contrasting with the dominant semi-diurnal sea-level periodicity in the area. They appear to be the manifestation of an internal wave, triggered by the diurnal surface tide and trapped by...
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Ano: 2018 URL: https://archimer.ifremer.fr/doc/00457/56850/58687.pdf
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Courantologie. Sous-région marine Golfe de Gascogne. Evaluation initiale DCSMM. ArchiMer
Lazure, Pascal; Desmare, Stéphanie.
Tipo: Text Palavras-chave: Golfe de Gascogne; Courants; Processus physiques; Circulation générale; Variabilité saisonnière; Courants de marée.
Ano: 2012 URL: https://archimer.ifremer.fr/doc/00329/44003/43575.pdf
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Modification du régime des courants. Sous-région marine Méditerranée occidentale. Evaluation initiale DCSMM. ArchiMer
Lazure, Pascal.
Tipo: Text Palavras-chave: Méditerranée; Courants régionaux; Modifications; Impacts des activités marines.
Ano: 2012 URL: https://archimer.ifremer.fr/doc/00331/44230/43799.pdf
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Deployment of new observing systems within the JERICO-RI ArchiMer
Puillat, Ingrid; Carlier, Antoine; Facq, Jean-valery; Rubio, Anna; Lazure, Pascal; Delauney, Laurent; Petihakis, George; Karlson, Bengt; Artigas, Felipe; Farcy, Patrick.
A key message of the JERICO-RI consortium (2014): “The complexity of the coastal ocean cannot be well understood if interconnection between physics, biogeochemistry and biology is not guaranteed. Such integration requires new technological developments allowing continuous monitoring of a larger set of parameters”. In agreement with this consideration, several new observing systems are developed, tested and deployed in the framework of the JERICO-NEXT H2020 project, amongst which a few of them will be presented as well as some preliminary results after the first deployments. Focus will be given on coastal transports and hydrology and on benthic biodiversity. In the first case, we will present a low cost 2D moored system dedicated to acquire vertical...
Tipo: Text Palavras-chave: JERICO; JERICO-NEXT; Coastal; Ocean Observing System (OOS); Harmonization.
Ano: 2018 URL: http://archimer.ifremer.fr/doc/00437/54866/56359.pdf
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Modèle hydro-sédimentaire du bassin de Marennes-Oléron : présentation et principaux résultats ArchiMer
Raillard, Olivier; Le Hir, Pierre; Lazure, Pascal.
Depuis plusieurs années l'écosystème conchylicole de Marennes-Oléron est l' objet de modélisations de complexité croissante qui tendent à intégrer de plus en plus de processus physiques et biologiques (Bacher, 1989 ; Raillard, 1991) afin d'accroître le réalisme et le champ d'investigation de l'outil (Héral et al., 1991 ) . Confrontés au problème de la variabilité spatiale et temporelle des concentrations du matériel dissous et particulaire de l'eau, les travaux les plus récents ont pu mettre en évidence les limitations des modèles d'écosystème qui asservissent spatialement et temporellement la représentation des processus physiques à celle des mécanismes biologiques (Raillard, 1991). Le but de cette étude est de développer une modélisation de l'écosystème...
Tipo: Text Palavras-chave: Modèle hydro-sédimentaire; Concentration particulaire; Concentration dissoute; Production primaire; Production secondaire; Bassin de Marennes Oléron; Charente Maritime Dep..
Ano: 1992 URL: http://archimer.ifremer.fr/doc/00102/21305/18918.pdf
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Analysis of salinity measurements near islands on the French continental shelf of the Bay of Biscay ArchiMer
Lazure, Pascal; Jegou, Anne-marie; Kerdreux, Michel.
The Bay of Biscay is characterised by large fresh water inputs from two major rivers, the Loire and the Gironde, with a mean discharge of about 900 m(3)/s. To describe the spatial and temporal variability of the Loire and Gironde plumes, continuous salinity measurements were made at 4 locations on French coastal islands over periods lasting at least two years. These islands are located at a distance from the large local gradients linked to local inputs. Whereas sea surface salinity in the centre of the Bay of Biscay is 35.6, salinities at the coast vary between about 35 in summer to occasionally less than 30 in late winter or in spring. Minimum salinities do not occur at the same time along the coast, indicating a strong spatial gradient. Near the Loire...
Tipo: Text Palavras-chave: Bay of Biscay; Continental shelf; River plume; Seasonal variability; Salinity; Hydrology.
Ano: 2006 URL: http://archimer.ifremer.fr/doc/2006/publication-3957.pdf
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Identification des flux de civelles (Anguilla anguilla) à partir des relations d’allométrie en fonction des conditions hydrodynamiques de l’estuaire de l’Adour ArchiMer
De Casamajor, Marie-noelle; Prouzet, Patrick; Lazure, Pascal.
Biological data on glass eels (Anguilla anguilla) were collected during two successive sampling periods from November to March (1996-1997 and 1997-1998) on the Adour estuary. As for other estuaries, decrease in length (mean of 73.5 to 67.4 mm) and weight (mean of 3.5 to 2.6 dg) of glass eels were observed. Weight and length characteristics were used to identify groups of glass eels. These groups were well distinguished during the first sampling period but some overlaps appeared in the second one. Fluctuations of static allometry and similarity coefficients showed successive glass eels arrivals in the lower part of the estuary during the two seasons. We used fluctuations of the index of similarity in the second period to describe arrivals of glass-eels...
Tipo: Text Palavras-chave: Biométrie; Modèle hydrodynamique; Flux migratoires; Civelle; Estuaire de l’Adour; Biometry; Hydrodynamic model; Migratory flow; Glass-eels; Adour estuary.
Ano: 2000 URL: http://archimer.ifremer.fr/doc/00188/29897/28346.pdf
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One-dimensional biophysical modelling of fish egg vertical distributions in shelf seas ArchiMer
Petitgas, Pierre; Magri Hoeltzener, Stephanie; Lazure, Pascal.
Modelling the vertical distribution of fish eggs is important when assessing fish stocks with egg production methods and for monitoring the reproductive potential of fish populations. Fish eggs are passive particles and their vertical distribution is determined by a few parameters such as egg density, egg diameter, wind- and tide-induced turbulence, and vertical hydrographic structure. A one-dimensional vertical biophysical, numerical model was developed which was adapted to the hydrography of shelf seas under the influence of tidal currents, wind-induced circulation, and river discharges. The biological part of the model parameterized the ascent velocity of the egg as a function of egg properties (diameter, density) and water properties (density,...
Tipo: Text Palavras-chave: Vertical distribution; Sprat; Sardine; Fish egg buoyancy; CUFES; Biophysical coupling; Anchovy.
Ano: 2006 URL: http://archimer.ifremer.fr/doc/2006/publication-2277.pdf
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Développement de l'aquaculture à Saint-Pierre et Miquelon : le cas d'étude de la pectiniculture - approche et méthodologies ArchiMer
Goraguer, Herle; Goulletquer, Philippe; Caisey, Xavier; Lazure, Pascal; Lajournade, M.; Lunven, Michel; Robert, Stephane; Rodriguez, Julien.
Tipo: Text
Ano: 2011 URL: http://archimer.ifremer.fr/doc/00063/17413/14920.pdf
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The Recopesca Project : a new example of participative approach to collect fisheries and in situ environmental data ArchiMer
Leblond, Emilie; Lazure, Pascal; Laurans, Martial; Rioual, Celine; Woerther, Patrice; Quemener, Loic; Berthou, Patrick.
Face to the lack of data to assess precisely the spatial distribution of catches and fishing effort and for the environmental characterization of the fishing area, Ifremer has been implemented since 2005 a new project, Recopesca. It consists in fitting out a sample of voluntary fishing vessels with sensors recording data on fishing effort (and at mid-terms catches) and physical parameters such as temperature or salinity. Recopesca aims at setting up a network of sensors, for scientific purposes, to collect data and improve resources assessment and diagnostics on fisheries, and environmental data required for ecosystem-based management initiatives. The challenge was to develop sensors with no trouble for the fishermen, tough enough to be fixed up on fishing...
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Ano: 2010 URL: http://archimer.ifremer.fr/doc/00024/13500/10514.pdf
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Modelling and numerical simulations of larval migration of the sole (Solea solea (L.)) of the Bay of Biscay. Part 1: modelling ArchiMer
Ramzi, Azeddine; Arino, Ovide; Koutsikopoulos, Constantine; Boussouar, Ahmed; Lazure, Pascal.
A spatio-temporal model describing the dynamics of a population of sole is presented. The model is an extension to a 2D-space structure of a 1D model published by the three first authors. Spatial migration is modelled by an advection-diffusion second order operator with constant coefficients. The physical domain is represented by a half-plane with the coast as its boundary. A formula for estimating the proportion of eggs reaching the juvenile stage, depending upon climatic, transport, growth and mortality processes, is derived. Numerical results are deferred to elsewhere.
Tipo: Text Palavras-chave: Recruitment; Diffusion and advection processes; Population dynamics; Recrutement; Processus de diffusion et d'advection; Dynamique de population.
Ano: 2001 URL: https://archimer.ifremer.fr/doc/2001/publication-531.pdf
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A model of the general circulation in the Persian Gulf and in the Strait of Hormuz: Intraseasonal to interannual variability ArchiMer
Pous, Stephane; Lazure, Pascal; Carton, Xavier.
Previous studies modeling the circulation and thermohaline structure in the Persian Gulf have suggested that interannual variability and vertical mixing processes could explain the model biases when compared to the few observations available. Here, a realistic, interannual, high-resolution model of the Persian Gulf is presented, validated against observations and then used to describe the intraseasonal to interannual variability in the circulation, water mass formation and exchange through the Strait of Hormuz. Sensitivity experiments to model settings, in particular vertical mixing parameterizations, have been performed in order to have the best comparison with all available observations. Main circulation and water mass characteristics correspond well to...
Tipo: Text Palavras-chave: Persian Gulf; Strait of Hormuz; Numerical model; Hydrology; Currents; Interannual variability.
Ano: 2015 URL: https://archimer.ifremer.fr/doc/00244/35563/35324.pdf
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