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Modelling seasonal dynamics of biomasses and nitrogen contents in a seagrass meadow (Zostera noltii Hornem.): application to the Thau lagoon (French Mediterranean coast) ArchiMer
Plus, Martin; Chapelle, Annie; Menesguen, Alain; Deslous-paoli, Jean-marc; Auby, Isabelle.
A numerical deterministic model for a seagrass ecosystem (Zostera noltii meadows) has been developed for the Thau lagoon. It involves both above- and belowground seagrass biomasses, nitrogen quotas and epiphytes. Driving variables are light intensity, wind speed, rain data and water temperature. This seagrass model has been coupled to another biological model in order to simulate the relative contributions of each primary producer to: (i) the total ecosystem production, (ii) the impact on inorganic nitrogen and (iii) the fluxes towards the detritus compartment. As a first step in the modelling of seagrass beds in the Thau lagoon, the model has a vertical structure based on four boxes (a water box on top of, three sediment boxes) and the horizontal...
Tipo: Text Palavras-chave: Thau lagoon; Nitrogen cycle; Oxygen cycle; Box model; Seagrass ecosystem.
Ano: 2003 URL: https://archimer.ifremer.fr/doc/2003/publication-461.pdf
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Re-oligotrophication trajectories of macrophyte assemblages in Mediterranean coastal lagoons based on 17-year time-series ArchiMer
Le Fur, Ines; De Wit, Rutger; Plus, Martin; Oheix, Jocelyne; Derolez, Valerie; Simier, Monique; Malet, Nathalie; Ouisse, Vincent.
Since the mid-20th century, Mediterranean lagoons have been affected by eutrophication, leading to significant changes in primary producers. In the early 2000s, management actions have been implemented to reduce nutrient inputs with the aim to achieve a good ecological status as requested by the EU water framework directive. As a result of these actions, a sharp decline in nutrient loads has been recorded in several lagoons leading to an oligotrophication of the water column. The analyses of a long-term data set (1998-2015) of 21 polyhaline and euhaline lagoons with contrasting trophic status allowed us to infer a general scheme for the changes in macrophyte assemblages during the oligotrophication process. Placing hypertrophic and oligotrophic conditions...
Tipo: Text Palavras-chave: Submerged aquatic vegetation; Recovery; Nutrient reduction; Restoration; Long-term data series; Resilience; Regime shift; Coastal lagoon.
Ano: 2019 URL: https://archimer.ifremer.fr/doc/00474/58555/61110.pdf
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Suivi stationnel des herbiers de zostères (Zostera noltei et Zostera marina) de la Masse d'eau côtière FRFC06 – Arcachon amont - - Bassin Hydrographique Adour-Garonne - 2006-2012 ArchiMer
Auby, Isabelle; Trut, Gilles; Rigouin, Loic; Oger-jeanneret, Helene; D'Amico, Florence; Duval, Magali; Gouriou, Laure; Rumebe, Myriam; Plus, Martin; Bujan, Stephane.
La Directive Cadre sur l’Eau 2000/60/CE établit un nouveau cadre pour une politique communautaire dans le domaine de l’eau. Elle fixe comme objectif général d’atteindre, à l’horizon 2015, un bon état écologique et chimique des masses d’eau souterraines et de surface, ces dernières incluant les eaux côtières (MEC) et les eaux de transition (MET). Dans ce cadre, un certain nombre d'éléments de qualité sont suivis, dont l'élément de qualité "Angiospermes" dans les masses d'eau où les herbiers de zostères sont présents. Ce rapport contient les résultats du suivi mis en oeuvre depuis 2006 pour cet élément de qualité dans la masse d'eau "Arcachon amont".
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Ano: 2013 URL: http://archimer.ifremer.fr/doc/00146/25695/23767.pdf
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Resource Competition Affects Plankton Community Structure; Evidence from Trait-Based Modeling ArchiMer
Sourisseau, Marc; Le Guennec, Valerie; Le Gland, Guillaume; Plus, Martin; Chapelle, Annie.
Understanding the phenology of phytoplankton species is still a challenge and despite a lot of theoretical work on competition for ressources this process is under-represented in deterministic models. To study the main driver of the species selection, we thus used a trait-based model that keeps phenotypic variability through physiological trait parameterization. We next validate the results by using a key species, the toxic dinoflagellate Alexandrium minutum. Due to their monitoring, we show that harmful algae are ideal models for studying ecological niches and for contributing to this more global challenge. As a first step, a dimensionless model of an estuary (France) was built with water temperature and water exchanges deduced from a hydro-dynamic model....
Tipo: Text Palavras-chave: Droop; Competition; Inter-specific; Estuary; Bay of Brest; Alexandrium minutum; Phenology; Niches.
Ano: 2017 URL: https://archimer.ifremer.fr/doc/00373/48414/48624.pdf
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Suivi « hydrologie » et « phytoplancton » des masses d'eau du bassin hydrographique Adour-Garonne en 2006-2011 ArchiMer
Auby, Isabelle; D'Amico, Florence; Neaud-masson, Nadine; Rumebe, Myriam; Barbier, Claire; Duval, Magali; Tournaire, Marie-pierre; Trut, Gilles; Plus, Martin; Maurer, Daniele; Ryckaert, Mireille; Derrien, Annick; Margat, Sylvie; Schmitt, Anne; Charpentier, Gabriel; Seugnet, Jean-luc; Grizon, James; Geairon, Philippe; Guilpain, Patrice; Thomas, Gerard; Guesdon, Stephane; Llevot, Gerard; Beaugrand, Philippe; Carrere, Christian; Michel, Valerie; Petrau, Christian; Bariou, Jean; Landier, Pascal; Debinski, Olivier; Le Mao, André; Miguel, Valérie.
Ce rapport rend compte des résultats acquis entre 2006 et 2011 sur les paramètres hydrologiques et le phytoplancton, dans le cadre des réseaux REPHY et ARCHYD (pour les points du Bassin d’Arcachon), et celui du contrôle de surveillance des masses d'eau du district Adour-Garonne qui ne faisaient pas l’objet de suivi avant la mise en œuvre de la DCE. Ce document contient des résultats concernant les éléments de qualité physico-chimique (oxygène dissous pour les deux types de masses d’eau, température et transparence pour les masses d’eau côtières exclusivement) selon des méthodes présentées dans trois documents (Daniel, 2009 a et b ; Daniel et Soudant, 2011), qui sont rapportées dans une annexe de ce rapport. Sont également inclues dans ce document les...
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Ano: 2012 URL: http://archimer.ifremer.fr/doc/00111/22193/19862.pdf
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Hydrodynamic characterization of the Arcachon Bay, using model-derived descriptors ArchiMer
Plus, Martin; Dumas, Franck; Stanisiere, Jean-yves; Maurer, Daniele.
A numerical model (MARS-2D) was developed, with the aim of describing the hydrodynamics that prevail in Arcachon Bay. Direct model results as well as derived mixing and transport time-scales (tidal prism, local and integrated flushing times, age of water masses), were used to understand the behaviour of water masses and exchanges between the Bay and its frontiers. Particular attention was paid to the processes that drive the hydrodynamics (tides, wind and rivers), in order to understand their respective influence. The Arcachon Bay hydrodynamic system appears primarily to be highly influenced by tides; secondarily, by winds. About two third of the lagoon total volume is flushed in and out at each tidal cycle, which represent a mean tidal prism of 384...
Tipo: Text Palavras-chave: Arcachon Bay; Tracer; Age of seawater; Flushing time; Tidal prism; Residual fluxes; Hydrodynamics.
Ano: 2009 URL: http://archimer.ifremer.fr/doc/2009/publication-6424.pdf
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Seasonal variations in photosynthetic irradiance response curves of macrophytes from a Mediterranean coastal lagoon ArchiMer
Plus, Martin; Auby, Isabelle; Verlaque, Marc; Levavasseur, Guy.
The main photosynthesis and respiration parameters (dark respiration rate, light saturated production rate, saturation irradiance, photosynthetic efficiency) were measured on a total of 23 macrophytes of the Than lagoon (2 Phanerogams, 5 Chlorophyceae, 10 Rhodophyceae and 6 Phaeophyceae). Those measurements were performed in vitro under controlled conditions, close to the natural ones, and at several seasons. Concomitantly, measurements of pigment concentrations, carbon, phosphorous and nitrogen contents in tissues were performed. Seasonal intra-specific variability of photosynthetic parameters was found very high, enlightening an important acclimatation capacity. The highest photosynthetic capacities were found for Chlorophyceae (e.g. Monostroma obscurum...
Tipo: Text Palavras-chave: Thau lagoon; Phaeophyceae; Rhodophyceae; Chlorophyceae; Seagrasses; Seasonal variations; Oxygen method; Macrophytes; Light response curve; Photosynthesis.
Ano: 2005 URL: http://archimer.ifremer.fr/doc/2005/publication-465.pdf
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Long-term evolution (1988-2008) of Zostera spp. meadows in Arcachon Bay (Bay of Biscay) ArchiMer
Plus, Martin; Dalloyau, Sebastien; Trut, Gilles; Isabelle, Auby; De Montaudouin, Xavier; Emery, Eric; Claire, Noel; Christophe, Viala.
The spatial variability of seagrass meadows in Arcachon Bay, was studied between 1988 and 2008 using a combination of mapping techniques based on aerial photographs for intertidal dwarf-grass (Zostera noltti) beds and acoustic sonar for permanently submerged eelgrass (Zostera marina) populations. The results show a severe decline over the period for both species, as well as an acceleration of the decline since 2005 for Z. noltii. The total surface regression over the studied period is estimated to be 22.8 km(2) for Z. noltii and 2.7 km(2) for Z. marina, which represent declines of 33 and 74% respectively. Environmental data time series spanning the same period were investigated in order to seek the causes for such a decline. The calculated inter-annual...
Tipo: Text Palavras-chave: Seagrass; Temporal evolution; Aerial photography; Acoustic sonar; Zostera noltii; Zostera marina; Arcachon Bay.
Ano: 2010 URL: http://archimer.ifremer.fr/doc/00003/11376/7969.pdf
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Suivi stationnel des herbiers de zostères (Zostera noltii et Zostera marina) de la Masse d'eau côtière FRFC06 - Arcachon amont - District Hydrographique Adour-Garonne - 2006-2007-2008 ArchiMer
Auby, Isabelle; Trut, Gilles; Plus, Martin; Vignon, Alan; Bujan, Stephane.
La Directive Cadre sur l’Eau 2000/60/CE établit un nouveau cadre pour une politique communautaire dans le domaine de l’eau. Elle fixe comme objectif général d’atteindre, à l’horizon 2015, un bon état écologique et chimique des masses d’eau souterraines et de surface, ces dernières incluant les eaux côtières (MEC) et les eaux de transition (MET). Pour évaluer l’état écologique d’une Masse d'Eau (ME), la DCE utilise la notion d’écart par rapport à une situation de référence. Les valeurs de référence, que l’on peut considérer comme niveau étalon du "très bon état écologique", ont été établies par type de ME et par élément de qualité biologique (phytoplancton, macrophytes (macroalgues et phanérogames marines)), faune macro-invertébrée et poissons...
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Ano: 2010 URL: http://archimer.ifremer.fr/doc/00032/14360/11650.pdf
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Phytoplankton versus macrophyte contribution to primary production and biogeochemical cycles of a coastal mesotidal system. A modelling approach ArchiMer
Plus, Martin; Auby, Isabelle; Maurer, Daniele; Trut, Gilles; Del Amo, Y.; Dumas, Franck; Thouvenin, Benedicte.
This study presents an assessment of the contributions of various primary producers to the global annual production and N/P cycles of a coastal system, namely the Arcachon Bay, by means of a numerical model. This 3D model fully couples hydrodynamic with ecological processes and simulates nitrogen, silicon and phosphorus cycles as well as phytoplankton, macroalgae and seagrasses. Total annual production rates for the different components were calculated for different years (2005, 2007 and 2009) during a time period of drastic reduction in seagrass beds since 2005. The total demand of nitrogen and phosphorus was also calculated and discussed with regards to the riverine inputs. Moreover, this study presents the first estimation of particulate organic carbon...
Tipo: Text Palavras-chave: Primary production; Macrophyte; Phytoplankton; Biogeochemical cycle; Physical-ecological coupled model; Arcachon bay.
Ano: 2015 URL: http://archimer.ifremer.fr/doc/00278/38963/37503.pdf
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Environmental factors contributing to the development of brown muscle disease and perkinsosis in Manila clams (Ruditapes philippinarum) and trematodiasis in cockles (Cerastoderma edule) of Arcachon Bay ArchiMer
Binias, Cindy; Do, Van Tu; Jude-lemeilleur, Florence; Plus, Martin; Froidefond, Jean-marie; De Montaudouin, Xavier.
The aim of the present study was to identify environmental factors that could explain the distribution of different pathologies of commercially exploited intertidal bivalves in an Atlantic lagoon, Arcachon Bay. In particular, the role of the salinity gradient as a driver was explored. The Manila clam Ruditapes philippinarum experienced two severe pathologies, perkinsosis, which is due to a protozoan parasite, and brown muscle disease (BMD), the etiological agent of which remains unknown. Perkinsus olseni infection was very low in a small low-salinity area but, at the scale of the entire lagoon, was more influenced by organic matter content in the sediment and by emersion time. BMD prevalence was also 2.6 times higher in the higher organic content area but...
Tipo: Text Palavras-chave: Arcachon bay; Bivalves; Diseases; Distribution; Parasites.
Ano: 2014 URL: http://archimer.ifremer.fr/doc/00200/31083/31922.pdf
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Etude de la flore introduite dans le Bassin d'Arcachon ArchiMer
Verlaque, Marc; Auby, Isabelle; Plus, Martin; Belsher, Thomas.
An inventory of the marine macrophytes introduced into the Arcachon Basin has been carried out through an exhaustive bibliographical analysis complemented by several sampling campaign made in November 2005, July 2006, February and December 2007. As a result, 22 introduced species have been listed. Nine of them are new to the region, and Herposiphonia parca and Pterosiphonia tanakae, are recorded for the first time from the Atlantic Ocean. Of this exotic flora, 17 species have also been introduced into the Thau Lagoon (France, Mediterranean). Except for some old introductions for which the most probable vector is the shipping, an introduction along with shellfish transfers, directly from Japan or via other aquaculture sites is highly probable. The great...
Tipo: Text Palavras-chave: Arcachon; Macrophytes marins; Inventaire; Espèces introduites; France.; Arcachon; Marines macrophytes; Checklist; Introduced species; France..
Ano: 2008 URL: http://archimer.ifremer.fr/doc/00152/26285/24368.pdf
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Suivi hydrologie et phytoplancton des masses d'eau du bassin hydrographique Adour-Garonne en 2005-2010 ArchiMer
Auby, Isabelle; D'Amico, Florence; Barbier, Claire; Duval, Magali; Neaud-masson, Nadine; Plus, Martin; Rumebe, Myriam; Tournaire, Marie-pierre; Trut, Gilles; Ryckaert, Mireille; Derrien, Annick; Margat, Sylvie; Schmitt, Anne; Charpentier, Gabriel; Seugnet, Jean-luc; Thomas, Gerard; Guesdon, Stephane; Llevot, Gerard; Beaugrand, Philippe; Carrere, Christian; Michel, Valérie; Petrau, Christian; Bariou, Jean; Landier, Pascal; Debinski, Olivier; Le Mao, André.
Ce rapport rend compte des résultats acquis entre 2005 et 2010 sur les paramètres hydrologiques et le phytoplancton, dans le cadre des réseaux REPHY et ARCHYD (pour les points du Bassin d’Arcachon), et celui du contrôle de surveillance des masses d'eau du district Adour-Garonne qui ne faisaient pas l’objet de suivi avant la mise en œuvre de la DCE. Ce document contient des résultats concernant les éléments de qualité physico-chimique (oxygène dissous pour les deux types de masses d’eau, température et transparence pour les masses d’eau côtières exclusivement) selon des méthodes présentées dans trois documents (Daniel, 2009 a et b ; Daniel et Soudant, 2011), qui sont rapportées dans l’annexe 1 de ce rapport. Sont également inclues dans ce document les...
Tipo: Text
Ano: 2011 URL: http://archimer.ifremer.fr/doc/00069/18021/15553.pdf
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Factors influencing primary production of seagrass beds (Zostera noltii Hornem.) in the Thau lagoon (French Mediterranean coast) ArchiMer
Plus, Martin; Deslous-paoli, Jean-marc; Auby, Isabelle; Dagault, Francoise.
The primary production and the respiration of Zostera noltii beds in the Thau lagoon were studied by means of the benthic bell jar technique, Concurrently, environmental data (temperature, light and nutrients) as well as morphological data of seagrass meadows (leaf width and height, density of shoots, above/below-ground biomass ratio) were collected with the purpose of explaining most of the observed variations in metabolism, Seagrass plus epiphyte respiration rates were influenced mainly by the water temperature, showing a typical exponential response to an increase in temperature, Surprisingly, measurements of production rates were not related to incoming light intensities recorded at the seagrass canopy level, An equation frequently used for terrestrial...
Tipo: Text Palavras-chave: Nitrogen contents; Temperature; Intercepted light by canopies; Seagrass ecosystem; Primary production.
Ano: 2001 URL: http://archimer.ifremer.fr/doc/2001/publication-458.pdf
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Compte rendu des travaux d’accompagnement de l’opération Resur 2 menée par le Comité Régional Conchylicole d’Arcachon ArchiMer
Gouillieux, Benoit; Plus, Martin; Auby, Isabelle; Tchaleu, Gwenaelle; Lapegue, Sylvie.
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Ano: 2011 URL: http://archimer.ifremer.fr/doc/00033/14386/11678.pdf
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Diagnostic étendu de l'eutrophisation (DIETE). Rôle des sédiments dans le cycle des nutriments et impacts sur l'eutrophisation de la baie de Vilaine (2014-2017) ArchiMer
Souchu, Philippe; Cochennec-laureau, Nathalie; Ratmaya, Widya; Retho, Michael; Andrieux, Francoise; Le Merrer, Yoann; Barille, Laurent; Barille, Anne-laure; Goubert, Evelyne; Plus, Martin; Laverman, Anniet.
Le projet DIETE a exploré les données hydrobiologiques (paramètres physico-chimiques, nutriments, phytoplancton) acquises depuis les années 80 dans les eaux côtières au large de la Loire et de la Vilaine, parallèlement à celles des deux fleuves. L’augmentation des concentrations de nitrates dans les eaux de la Loire, appuyée par les réserves sédimentaires de phosphates et de silicate ont entraîné de profonds bouleversements dans la dynamique du phytoplancton de la baie de Vilaine ces deux dernières décennies avec 1) une augmentation substantielle de la biomasse, 2) une modification importante de l’évolution saisonnière, 3) un changement dans les proportions entre diatomées et dinoflagellés au profit des diatomées. Ces résultats ouvrent tout un champ...
Tipo: Text Palavras-chave: Eutophisation; Azote; Phosphore; Silicium; Sédiments; Modélisation.
Ano: 2018 URL: http://archimer.ifremer.fr/doc/00425/53695/54593.pdf
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Protocoles de suivi stationnel des herbiers à zostères pour la Directive Cadre sur l’Eau (DCE) Zostera marina - Zostera noltei. Version 2 ArchiMer
Auby, Isabelle; Sauriau, Pierre-guy; Oger-jeanneret, Helene; Hily, Christian; Dalloyau, Sebastien; Rollet, Claire; Trut, Gilles; Fortune, Mireille; Plus, Martin; Rigouin, Loic.
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Ano: 2014 URL: https://archimer.ifremer.fr/doc/00186/29685/28059.pdf
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Suivi « hydrologie » et « phytoplancton » des masses d'eau du bassin hydrographique Adour-Garonne en 2007-2012 ArchiMer
Auby, Isabelle; D'Amico, Florence; Barbier, Claire; Maurer, Daniele; Gouriou, Laure; Plus, Martin; Rigouin, Loic; Rumebe, Myriam; Tournaire, Marie-pierre; Trut, Gilles; Oger-jeanneret, Helene; Derrien, Annick; Genauzeau, Sylvie; Schmitt, Anne; Charpentier, Gabriel; Seugnet, Jean-luc; Grizon, James; Geairon, Philippe; Guilpain, Patrice; Thomas, Gerard; Guesdon, Stephane; Chabirand, Jean-michel; Soudant, Dominique; Lamoureux, Alice; Llevot, Gerard; Beaugrand, Philippe; Michel, Valérie; Petrau, Christian; Bariou, Jean; Landier, Pascal; Miguel, Valérie.
Ce rapport rend compte des résultats acquis entre 2007 et 2012 sur les paramètres hydrologiques et le phytoplancton, dans le cadre des réseaux REPHY et ARCHYD (pour les points du Bassin d’Arcachon), et celui du contrôle de surveillance des masses d'eau du district Adour-Garonne qui ne faisaient pas l’objet de suivi avant la mise en œuvre de la DCE. Ce document contient des résultats concernant les éléments de qualité physico-chimique (oxygène dissous et nutriments pour les deux types de masses d’eau, température et transparence pour les masses d’eau côtières exclusivement) selon des méthodes présentées dans quatre documents (Daniel, 2009 a et b ; Daniel et Soudant, 2010, 2011), qui sont rapportées dans une annexe de ce rapport. Sont également inclues dans...
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Ano: 2013 URL: http://archimer.ifremer.fr/doc/00152/26281/24364.pdf
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Suivi hydrologie et phytoplancton des masses d'eau du bassin hydrographique Adour-Garonne en 2003-2008 ArchiMer
Auby, Isabelle; D'Amico, Florence; Duval, Magali; Neaud-masson, Nadine; Plus, Martin; Rumebe, Myriam; Tournaire, Marie-pierre; Trut, Gilles; Ryckaert, Mireille; Derrien, Annick; Genauzeau, Sylvie; Schmitt, Anne; Charpentier, Gabriel; Grizon, James; Seugnet, Jean-luc; Thomas, Gerard; Llevot, Gérard; Beaugrand, Philippe; Carrere, Christian; Michel, Valérie; Petrau, Christian; Bariou, Jean; Debinski, Olivier; Le Mao, André.
La Directive Cadre sur l’Eau 2000/60/CE établit un nouveau cadre pour une politique communautaire dans le domaine de l’eau. Elle fixe comme objectif général l’atteinte, à l’horizon 2015, d’un bon état écologique et chimique des masses d’eau souterraines et de surface, ces dernières incluant les eaux côtières et de transition (estuaires en particulier).
Tipo: Text
Ano: 2010 URL: http://archimer.ifremer.fr/doc/00032/14354/11640.pdf
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Suivi DCE du paramètre macroalgue subtidale (FRFC11 côte basque année 2011) ArchiMer
De Casamajor, Marie-noelle; Duval, Magali; Plus, Martin; Lissardy, Muriel.
Under the WFD monitoring the “subtidal macroalgae” parameter is calculated for the second time on the Basque coast water body from the protocol used in Britain and adapted to local environmental context. In 2011, three stations were sampled instead of 5 in 2008. The result is the same to the one obtained in 2008 with a quality index "medium" for the whole of the water body. The main criterion penalizing the calculation of the index is "opportunistic species" for each station. There is variability between sites according to the criteria between the two campaigns reflecting the interest of monitoring every three years on the three sites.
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Ano: 2012 URL: http://archimer.ifremer.fr/doc/00083/19412/17023.pdf
Registros recuperados: 41
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