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Accuracy of the malaria epidemiological surveillance system data in the state of Amazonas Acta Amazonica
WIEFELS,Alexandre; Wolfarth-COUTO,Bruna; FILIZOLA,Naziano; DURIEUX,Laurent; MANGEAS,Morgan.
ABSTRACT The Epidemiological Surveillance System for Malaria (SIVEP-Malaria) is the Brazilian governmental program that registers all information about compulsory reporting of detected cases of malaria by all medical units and medical practitioners. The objective of this study is to point out the main sources of errors in the SIVEP-Malaria database by applying a data cleaning method to assist researchers about the best way to use it and to report the problems to authorities. The aim of this study was to assess the quality of the data collected by the surveillance system and its accuracy. The SIVEP-Malaria data base used was for the state of Amazonas, Brazil, with data collected from 2003 to 2014. A data cleaning method was applied to the database to detect...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Erroneous data; Database; Health surveillance.
Ano: 2016 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0044-59672016000400383
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Scientometric diagnosis of the use of remote sensing images in Landscape Ecology studies - doi: 10.4025/actascibiolsci.v35i1.8444 Biological Sciences
Sarragiotto, Mariana Cristina; Universidade Estadual de Maringá; Benedito, Evanilde; Universidade Estadual de Maringá.
This work analyzed the implementation of images from the remote sensors ASTER, CBERS, IKONOS, LANDSAT, MODIS, NOAA, QUICKBIRD and SPOT in Brazilian and international Landscape Ecology studies, developed between 1991 and July 2009. The study analyzed works published in article form using the ISI Web of Knowledge website, and theses and dissertations from the “Thesis Database” at CAPES (Coordenação de Aperfeiçoamento de Pessoal de Ensino Superior). A total of 124 Brazilian and 144 international published works were examined, analyzing 11 and six parameters, respectively. It was observed that the images from sensors MODIS (53%) and LANDSAT (32%) are employed more frequently in international research studies, whereas in Brazil there is preference for products...
Tipo: Cienciometria Palavras-chave: 2.05.00.00-9; 2.05.02.00-1 remote sensing; Database; Scientometrics; LANDSAT; SPOT; MODIS Ecologia 2.05.02.00-1 Ecologia.
Ano: 2012 URL: http://periodicos.uem.br/ojs/index.php/ActaSciBiolSci/article/view/8444
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The potential contribution of the natural products from Brazilian biodiversity to bioeconomy Anais da ABC (AABC)
VALLI,MARILIA; RUSSO,HELENA M.; BOLZANI,VANDERLAN S..
ABSTRACT The development of our society has been based on the use of biodiversity, especially for medicines and nutrition. Brazil is the nation with the largest biodiversity in the world accounting for more than 15% of all living species. The devastation of biodiversity in Brazil is critical and may not only cause the loss of species and genes that encode enzymes involved in the complex metabolism of organisms, but also the loss of a rich chemical diversity, which is a potential source for bioeconomy based on natural products and new synthetic derivatives. Bioeconomy focus on the use of bio-based products, instead of fossil-based ones and could address some of the important challenges faced by society. Considering the chemical and biological diversity of...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Brazilian biodiversity; Natural products; Medicinal chemistry; Database.
Ano: 2018 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0001-37652018000200763
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Natural Products: Perspectives and Challenges for use of Brazilian Plant Species in the Bioeconomy Anais da ABC (AABC)
VALLI,MARILIA; BOLZANI,VANDERLAN S..
Abstract: The development of our society has been based on the use of biodiversity, especially for nutrition, medicines and beauty. Brazil is the nation with the largest biodiversity in the world, with a rich chemical diversity, which is a potential source for bioeconomy. Considering the chemical and biological diversity of the Brazilian territory, we would like to highlight the value of secondary metabolites from Brazilian biodiversity with potential application for new products and technologies and the importance of scientific programs to support the sustainable use of biodiversity.
Tipo: Info:eu-repo/semantics/article Palavras-chave: Brazilian biodiversity; Natural products; Database; Medicinal chemistry.
Ano: 2019 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0001-37652019000600402
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Visual FTBL Generator: Visual Generation Tool for 13C-FLUX File BABT
Yu,Guojun; Rui,Bin; Fan,Xinyue; Xie,Xiaoyao.
Abstract 13C metabolic flux analysis (13C-MFA) has achieved increasing significance in quantitative metabolic system analysis in recent years. In 13C metabolic flux analysis, 13C-FLUX software is a major analytical tool. The software’s input script is primarily expressed in textual form without visual presentation of the structure of the entire metabolic network, thus error-prone in manual input. To solve this problem, we have developed a visual FTBL generator (VFG, available at http://47.100.98.220/vfg/index.jsp in a Google or Firefox browser)for MFA that eliminates the tedious, error-prone text entry mode and provides a user-friendly graphical interface and simple visual reaction generation functions.
Tipo: Info:eu-repo/semantics/article Palavras-chave: Metabolic network; Visualization; 13C-FLUX; Database.
Ano: 2019 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1516-89132019000100610
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Gender and age differences in polysomnography findings and sleep complaints of patients referred to a sleep laboratory BJMBR
Silva,A.; Andersen,M.L.; De Mello,M.T.; Bittencourt,L.R.A.; Peruzzo,D.; Tufik,S..
Our objective was to examine the effet of gender on the sleep pattern of patients referred to a sleep laboratory. The data (questionnaires and polysomnographic recordings) were collected from a total of 2365 patients (1550 men and 815 women). The polysomnography permits an objective assessment of the sleep pattern. We included only polysomnography exams obtained with no more than one recording system in order to permit normalization of the data. Men had a significantly higher body mass index than women (28.5 ± 4.8 vs 27.7 ± 6.35 kg/m²) and had a significantly higher score on the Epworth Sleepiness Scale (10.8 ± 5.3 vs 9.5 ± 6.0), suggesting daytime sleepiness. Women had a significantly higher sleep latency than men, as well as a higher rapid eye movement...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Sleep; Gender; Polysomnography; Apnea; Insomnia; Database.
Ano: 2008 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0100-879X2008001200005
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PEDOTRANSFER FUNCTIONS FOR WATER RETENTION IN THE MAIN SOILS FROM THE BRAZILIAN COASTAL PLAINS Ciência e Agrotecnologia
Silva,Elidiane da; Curi,Nilton; Ferreira,Mozart Martins; Volpato,Margarete Marin Lordelo; Santos,Walbert Júnior Reis dos; Silva,Sérgio Henrique Godinho.
Pedotransfer functions (PTFs) are equations used to estimate soil characteristics difficult to determine from other easily obtained ones. Water retention in soil is used in several agronomic and environmental applications, but its direct determination is time consuming and onerous, therefore PTFs are alternatives to obtaining this information more quickly and economically. The aims of this study were to generate a database and develop PTFs for water retention at potentials of -33 kPa (field capacity) and -1500 kPa (permanent wilting point) for Yellow Argisol and Yellow Latosol from the Brazilian Coastal Plains region. The Coastal Plains soils are mostly developed from Barreiras formation (pre-weathered sediments) and their main uses are sugarcane,...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Database; Pedofunction; Permanent wilting point; Field capacity.
Ano: 2015 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1413-70542015000400331
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A web-based bioinformatics interface applied to the GENOSOJA project: databases and pipelines Genet. Mol. Biol.
Nascimento,Leandro Costa do; Costa,Gustavo Gilson Lacerda; Binneck,Eliseu; Pereira,Gonçalo Amarante Guimarães; Carazzolle,Marcelo Falsarella.
The Genosoja consortium is an initiative to integrate different omics research approaches carried out in Brazil. Basically, the aim of the project is to improve the plant by identifying genes involved in responses against stresses that affect domestic production, like drought stress and Asian Rust fungal disease. To do so, the project generated several types of sequence data using different methodologies, most of them sequenced by next generation sequencers. The initial stage of the project is highly dependent on bioinformatics analysis, providing suitable tools and integrated databases. In this work, we describe the main features of the Genosoja web database, including the pipelines to analyze some kinds of data (ESTs, SuperSAGE, microRNAs, subtractive...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Bioinformatics; Database; Gene expression; Soybean; Genosoja.
Ano: 2012 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572012000200002
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Availability of data for the Black Sea climate change research IBSS Repository
Vladymyrov, V..
This review presents a brief analysis and sources (including URLs for the Internet sources) of the most interesting and informative Black Sea oceanographic data sets (excluding satellite data) that are now available for the scientific community with the main attention on the long term data sets. The results of the analysis show that a number of the available Black Sea datasets is growing permanently. However, this process is still rather slow and insufficient. One can hope that new international projects that cover the Black Sea region will drastically improve the situation in nearest years. The attempts should be made as well to create the united reliable quality checked data time series especially for biological data for which long time series do not...
Tipo: Proceedings Paper Palavras-chave: Black Sea; Data; Database; Climate change; Internet.
Ano: 2008 URL: http://repository.ibss.org.ua/dspace/handle/99011/697
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Black Sea Mnemiopsis Leidyi database and plankton check list: online tools developed within the black sea scene project IBSS Repository
Slipetskyy, D.; Sergeyeva, O.; Gorbunov, V.; Vladymyrov, V.; Tezcan, D.; Myroshnychenko, V.; Gucu, A..
Several specific data and information management tools were developed within the EC Black Sea SCENE project for the Black Sea region. They are: (1) Black Sea Mnemiopsis database, (2) Black Sea Phytoplankton checklist, and (3) Black Sea Zooplankton checklist. The tools work on the Web and have simple user friendly interfaces. They will help to the Black Sea scientists to make their work with biological data more effective and productive. The tools are now being tested by the project participants and populated with the corresponding data and information.
Tipo: Proceedings Paper Palavras-chave: Black Sea; Species checklist; Mnemiopsis leidyi; Plankton; Database.
Ano: 2008 URL: http://repository.ibss.org.ua/dspace/handle/99011/695
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Integrated data and information management system to collect and analyze biological data for climate change research IBSS Repository
Sergeyeva, O.; Slipetskyy, D.; Gorbunov, V.; Vladymyrov, V..
The integrated data and information management system (InDIMS) has been developed at the Institute of Biology of the Southern Seas (Sevastopol, Ukraine), The system gives the possibility to have the convenient access to all types of data and information necessary for the effective scientific work including both the data collected within the institute and data form different national and international sources. The system can be used for a number of tasks including the climate change research.
Tipo: Proceedings Paper Palavras-chave: Biological data; Metadata; Database; Internet; Climate change.
Ano: 2008 URL: http://repository.ibss.org.ua/dspace/handle/99011/696
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Sistema computadorizado para estudo de recursos de terra na America Tropical: guia de programacao para usuario. Infoteca-e
CASTRO, N. F. de; COCHRANE, T. T.; MADEIRA NETTO, J. da S..
Tipo: Livros Palavras-chave: Regiao Tropical; Classificacao; Informacao; Brasil; América do Sul; América tropical; Armazenamento de informação; Arquivo; Automated infomation; Banco de dados; Database; Information storage; Information system; Natural resource; Base de Dados; Automação; Clima; Computador; Cerrado; Informática; Programa de Computador; Recurso Natural; Terra; Solo; Climate; Computer software; Land.
Ano: 1986 URL: http://www.infoteca.cnptia.embrapa.br/infoteca/handle/doc/548537
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Uso de sistema de informações geográficas no mapeamento da produção, produtividade e área plantada de cajueiro na Região Nordeste. Infoteca-e
COSTA, C. A. R.; AGUIAR, M. de J. N.; LIMA, J. B. de.
A cultura do cajueiro tem uma reconhecida importancia como gerandora de ocupacao e renda na Regiao Nordeste, principalmente devido a exploracao da castanha, que se destaca como produto de exportacao; entretanto, a falta de planejamento para o desenvolvimento da cajucultura tem levado, por duas vezes, ao cultivo em areas inadequadas, resultando em indices de produtividade abaixo do esperado; o principal objetivo deste trabalho e a elaboracao de um banco de dados geografico, utilizando um Sistema de Informacoes Geograficas(SIG), para fornecer conhecimentos sobre como se distribuem os indices de producao e produtividade em areas onde ja existe a cultura do cajueiro...
Tipo: Folhetos Palavras-chave: Banco de dados; Cajucultura; Geographic information system; Database; Cashew culture; Sistema de Informação Geográfica.
Ano: 1999 URL: http://www.infoteca.cnptia.embrapa.br/infoteca/handle/doc/421970
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Migração de banco de dados Oracle para PostgreSQL. Infoteca-e
SOUZA, E. P. de.
Preparação do ambiente operacional. Processo de migração do SGBD. Otimização de desempenho do PostgreSQL. Criação e restauração de cópias de segurança.
Tipo: Folhetos Palavras-chave: Oracle; PostgreSQL; Database; SGBD; Migraçaõ.
Ano: 2007 URL: http://www.infoteca.cnptia.embrapa.br/infoteca/handle/doc/8504
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Avaliação técnica e financeira da atividade de produção de leite em uma fazenda familiar. Infoteca-e
VELOSO, R. F.; FERNANDES, F. B.; ALMEIDA, P. H. de; CUNHA, M. A. D.; BOATO, F.; RIBEIRO, A. C. F.; MARTINS, M. C.; COLOCA, A. A..
Este trabalho apresenta uma avaliação tecnica e financeira da atividade de producao de leite em uma fazenda do Municipio de Gameleira-GO, regiao sul de Estado de Goias que incorpora, tambem, atividades de producao de graos, de cereais e de tomate industrial irrigado. O trabalho visa tambem a demostrar a importância de um estudo de caso, para avaliacao de novas tecnologias. Com o software Microsoft Acces, desenvoveu-se um sistema de informacoes gerencias, no ambito de uma fazenda. Apresentaram-se os resultados de desmpenho da atividade de producao de leite, bem como propuseram-se melhorias no processo de producao de leite que incluiram: novas opcoes de producao de volumoso e compra de concentrado a granel a menor custo, passiveis de serem adotadas pelo...
Tipo: Livros Palavras-chave: DRURAL100; Producao de leite; Banco de dados; Estudo de caso; Fazenda familiar; Information system; Database; Case study; Family farm; Desenvolvimento rural: Analise tecnico-financeira de sistema de producao; Administração; Cerrado; Fazenda; Planejamento; Produção Leiteira; Sistema de Informação; Milk production.
Ano: 2001 URL: http://www.infoteca.cnptia.embrapa.br/infoteca/handle/doc/567098
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Exploration fonctionnelle de gènes différentiellement exprimés entre les souches d'huîtres creuses Crassostrea gigas résistantes et sensibles à la mortalité estivale ArchiMer
Fleury, Elodie.
This work contributed to the development of specific genomic tools for the Pacific oyster Crassostrea gigas, aiming to identify molecular markers associated with summer survival of this species. To do so, 29745 ESTs obtained from different sequencing programs were grouped in a unique database. 9058 unigenes have been used to produce a cDNA microarray, to compare lines selected to be Resistant (R) or Sensitive (S) to summer mortality. 34 genes were observed as differentially expressed before the mortality event. Most of these genes are associated with reproduction and oxidative stress. This underlines the implication of the cost of reproduction and the importance of oxidative stress defenses in development of an immune weakness before the mortality event....
Tipo: Text Palavras-chave: Reproduction; Transforming Growth Factor b; Micorarray; Database; Summer mortality; Bivalves; Reproduction; Transforming Growth Factor b; Puce à ADN; Base de données; Mortalité estivale; Bivalves.
Ano: 2009 URL: http://archimer.ifremer.fr/doc/2009/these-6462.pdf
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Scénarios d'aménagment des activités de pêche dans la bande cotière bretonne, rapport 2003 ArchiMer
Talidec, Catherine; Daures, Fabienne; Leblond, Emilie; Lesueur, M.; Boude, J.p..
This document is the progress report, for the third year, of the research programme "Scenarios for Development of Fishing Activity in the Breton Coastal Strip". Co-financed by the Brittany Region within the framework of the XII State/Regional Planning Contract, this programme teams up scientific partners from IFREMER, ENSAR, and UBO (CEDEM). This report is made up of two parts: - The first part is dedicated to the synthesis of the fisheries of Mor Braz. It was a matter of approaching the whole of Mor Braz with the methodology used for the study of customs, resources and space in the Gulf of Morbihan. Following the presentation of fishing activities, the first results on the economic situation of the fleets are explained. - The second part is a legal and...
Tipo: Text Palavras-chave: Database; Ship survey; Licence; Fishing assessment; Fleet; Costal fishing; Brittany; Enquêtes; Bases de données; Navire; Licence; Étude juridique; Flottille; Golfe du Morbihan; Pêcheries cotières; Mor Braz; CPER; Pêche; Bretagne.
Ano: 2004 URL: http://archimer.ifremer.fr/doc/2004/rapport-2262.pdf
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A MALDI-TOF MS database for fast identification of Vibrio spp. potentially pathogenic to marine mollusks ArchiMer
Moussa, M.; Cauvin, E.; Le Piouffle, A.; Lucas, O.; Bidault, Adeline; Paillard, Christine; Benoit, F.; Thuillier, B.; Treilles, M.; Travers, Marie-agnes; Garcia, Celine.
In mollusk aquaculture, a large number of Vibrio species are considered major pathogens. Conventional methods based on DNA amplification and sequencing used to accurately identify Vibrio species are unsuitable for monitoring programs because they are time-consuming and expensive. The aim of this study was, therefore, to develop the MALDI-TOF MS method in order to establish a rapid identification technique for a large panel of Vibrio species. We created the EnviBase containing 120 main spectra projections (MSP) of the Vibrio species that are potentially responsible for mollusk diseases, comprising 25 species: V. aestuarianus, V. cortegadensis, V. tapetis and species belonging to the Coralliilyticus, Harveyi, Mediterranei, and Orientalis clades. Each MSP was...
Tipo: Text Palavras-chave: Vibrio; MALDI-TOF MS; Database; Marine mollusk pathogens.
Ano: 2021 URL: https://archimer.ifremer.fr/doc/00680/79224/81732.pdf
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Genetic catalogue, biological reference collections and online database of European marine fishes ArchiMer
Bautista, José M.; Verrez-bagnis, Veronique; Kourti, Naouma.
Taxonomy and systematics of most animal species have been described in sufficient detail to permit the classification of practically any organism and, in particular, may be of use in the identification of the species and subspecies for the fish trade and ecological concerns regarding fisheries. However, before FishTrace started there was a lack of fast reference tools that hindered the efficient identification and differentiation of teleosts required in fisheries management, biological and ecological research, and human consumption. This problem could affect several of the socio-economic activities related to Fisheries Policies and therefore, the constitution of a database for identification of fish species of commercial, ecological and zoological interest...
Tipo: Text Palavras-chave: Database; Fish; Genetics.
Ano: 2006 URL: http://archimer.ifremer.fr/doc/2006/rapport-6595.pdf
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Scénarios d'aménagement des activités de pêche dans la bande cotière bretonne : rapport 2004 ArchiMer
Talidec, Catherine; Daures, Fabienne; Leblond, Emilie; Berthou, Patrick; Guyader, Olivier; Thebaud, Olivier; Peronnet, Isabelle; Boncoeur, J.; Curtil, O.; Martin, A.; Le Floc'H, P.; Travers, M.; Le Lec, G..
This document is the progress report, for the year 2004, of the research programme "Scenarios for Development of Fishing Activity in the Breton Coastal Strip". This programme, co-financed by the Brittany Region within the framework of the XII State/Regional Planning Contract, teams up scientific partners from IFREMER, ENSAR, and UBO (CEDEM). This report consists of four parts: 1. Introduction of the Breton fishing fleet, its characteristics, its activity and its recent history 2. Spatial management of fishing economic activity in the Breton coastal strip 3. Measuring of economic results of Breton professional fishing: Comparison of methods based on accounting data and local surveys 4. Assessment of the economic weight of professional fishing: analysis of...
Tipo: Text Palavras-chave: Allotments; Trawl survey; Database; Spatial assessment; Coastal fishing; Brittany; Cantonnement; Chalutage; Enquêtes; Bases de données; Gestion spatiale; Pêche cotière; Bretagne.
Ano: 2005 URL: http://archimer.ifremer.fr/doc/2005/rapport-2263.pdf
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