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Registros recuperados: 129
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Comparative leaf morphological analysis of 20 species of Chrysobalanaceae Acta Amazonica
CORRÊA,Marcos Melo; SCUDELLER,Veridiana Vizoni; ARAÚJO,Maria Gracimar Pacheco de.
Morphological studies focusing on vegetative traits are useful in identifying species when fertile material is not available. The aim of this study was to assess the application of comparative leaf morphology to identify species of the Chrysobalanaceae family. The morphological observations were made with a stereomicroscope. We used the diaphanization technique for viewing venation details. It is shown the descriptions of the leaf morphology, illustrations and an identification key for 20 species from genera Couepia, Licania and Parinari (Chrysobalanaceae) occurring in the Adolpho Ducke Forest Reserve, Manaus, AM, Brazil. The key was constructed using the DELTA (DEscription Language for TAxonomy) software. Leaf traits such as the presence of intersecondary...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Amazonia; Identification; Taxonomy.
Ano: 2015 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0044-59672015000100013
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Screening of whole yeast free-cells and optimization of pH and temperature for fructooligosaccharides production Biological Sciences
Deffert, Flávia; Agustini, Bruna Carla; Picheth, Geraldo; Bonfim, Tania Maria Bordin.
Fructooligosaccharides are catalyzed by β–fructofuranosidase enzyme, produced by many microorganisms. However, in order to achieve a more profitable, low time-consuming process with lower cost, researchers have sought alternatives. This study aimed to select and identify yeasts able to produce fructooligosaccharides and evaluate the influence of pH and temperature on their synthesis. Yeast suspensions, solutions of 500 g L-1 sucrose and three values of pH (4.5, 5.5, and 6.5) and temperature (40, 50, and 60ºC) were tested. Yeast species were identified by molecular techniques. Among 141 yeast isolates from grapes, 65 were able to synthesize fructooligosaccharides. The maximum concentration of fructooligosaccharides was 4.8% (w v-1), and Saccharomyces...
Tipo: Info:eu-repo/semantics/article Palavras-chave: 2.12.00.00-9 prebiotics; Biotransformation; Identification; PCR. Microbiologia.
Ano: 2017 URL: http://periodicos.uem.br/ojs/index.php/ActaSciBiolSci/article/view/34140
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Identification of Tibicen cicada species by a Principal Components Analysis of their songs Anais da ABC (AABC)
Ohya,Eiji.
Specific identification of three Tibicen cicadas, T. japonicus, T. flammatus and T. bihamatus, by their chirping sounds was carried out using Principal Components Analysis (PCA). High quality recordings of each species were used as the standards. The peak and mean frequencies and the pulse rate were used as the variables. Out of 12 samples recorded in the fields one fell in the vicinity of T. japonicus and all other were positioned near T. bihamatus. Then the cluster analysis of the PCA scores clearly separated each species and allocated the samples in the same way.
Tipo: Info:eu-repo/semantics/article Palavras-chave: Cicada; Tibicen; Principal Components Analysis; Sound; Identification.
Ano: 2004 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0001-37652004000200038
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Identification of meat isolated bacteriocin-producing lactic acid bacteria using biotyping and ribotyping Arq. Bras. Med. Vet. Zootec.
Martinis,E.C.P. De.
Três cepas de bactérias láticas previamente isoladas a partir de produtos cárneos foram caracterizadas comparando-se resultados de testes bioquímicos e ribotipagem. Os resultados obtidos foram concordantes para Lactobacillus sake 1 e Lactobacillus curvatus 5. A cepa 16 foi identificada como Lactobacillus curvatus por testes bioquímicos e como Lactobacillus sake por ribotipagem, demonstrando a diferença entre as técnicas utilizadas. Recomenda-se, no momento, a técnica de ribotipagem para a identificação de bactérias láticas isoladas de carnes.
Tipo: Info:eu-repo/semantics/article Palavras-chave: Lactic acid bacteria; Identification; Meat.
Ano: 2002 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0102-09352002000600018
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Thrips species (Insecta: Thysanoptera) associated to Fabaceae of agricultural importance in Cerrado and Amazon-Caatinga ecotone from Brazilian Mid-North Biota Neotropica
Lima,Élison Fabrício Bezerra; Monteiro,Renata Chiarini; Zucchi,Roberto Antonio.
Little is known about the Thysanoptera fauna from Brazilian Mid-North. In spite of being a region with at least three biomes and some ecotones, the studies on this insect order in the region are related to associations to a few cultivated plant species. On Fabaceae, plant family with the second largest number of records of thrips species associated in Brazil and huge economic importance for Mid-North, there are thrips records only on cowpea (Vigna unguiculata (L.) Walp.). Due to the lack of knowledge on the Thysanoptera fauna in such a diverse area and the importance of crops of this family in the region, this research aimed to survey the thrips species associated to Fabaceae of agricultural importance in areas of Cerrado and Amazon-Caatinga ecotone in...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Identification; Thrips diversity; Fabaceous; Host association; Damages.
Ano: 2013 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1676-06032013000200283
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An illustrated key to male Actinote from Southeastern Brazil (Lepidoptera, Nymphalidae) Biota Neotropica
Francini,Ronaldo Bastos; Penz,Carla M..
In certain times of the year, Actinote butterflies can be vastly abundant in Southeastern Brazil, thus representing conspicuous denizens of our fauna. Their wing coloration allows for the recognition of five major patterns, which probably resulted from mimicry. Furthermore, examination of series of field-collected and reared specimens clearly demonstrates a high intra-specific variation in wing color pattern. In concert, inter-specific resemblance (mimicry) and intra-specific variation make it difficult to discriminate Actinote species from each other. This key aims at providing a tool for identification of male Actinote. To that effect, we provide diagnostic characters and illustrations of wings and male genitalia for 22 species. We hope that the clear...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Butterfly; Identification; Genitalia; Mimicry.
Ano: 2006 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1676-06032006000100013
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Species determination of Brazilian mammals implicated in the epidemiology of rabies based on the control region of mitochondrial DNA BJID
Carnieli Junior,Pedro; Fahl,Willian de Oliveira; Castilho,Juliana Galera; Brandão,Paulo Eduardo; Carrieri,Maria Luiza; Kotait,Ivanete.
Identification of animals that are decomposing or have been run over or burnt and cannot be visually identified is a problem in the surveillance and control of infectious diseases. Many of these animals are wild and represent a valuable source of information for epidemiologic research as they may be carriers of an infectious agent. This article discusses the results obtained using a method for identifying mammals genetically by sequencing their mitochondrial DNA control region. Fourteen species were analyzed and identified. These included the main reservoirs and transmitters of rabies virus, namely, canids, chiroptera and primates. The results prove that this method of genetic identification is both efficient and simple and that it can be used in the...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Mitochondrial DNA; Sequencing; Identification; Mammals; Rabies.
Ano: 2008 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1413-86702008000600002
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Evaluation of the automated system Vitek2 for identification and antimicrobial susceptibility testing of Brazilian Gram-positive cocci strains BJID
d'Azevedo,Pedro Alves; Siquiera,Itacy; Gugel,Juliana; Antunes,Ana Lúcia Souza; Secchi,Carina; Pasternak,Jacyr; Martino,Marinês Dalla Vale.
Automated instruments offer many advantages for clinical laboratories. Nevertheless, they can have problems identifying and determining susceptibilities of some pathogens. Vitek® 2 (bioMérieux) is an automated system that was recently introduced to Brazil. We evaluated the performance of this equipment for Brazilian isolates that had been characterized using reference identification and antimicrobial susceptibility testing methods. Ninety-nine strains of Gram-positive cocci from a local reference center collection were analyzed, consisting of 50 coagulasenegative Staphylococcus (CoNS) and 49 Enterococcus and related species. Vitek® 2 correctly identified 79.8% (79/99) of the isolates. Oxacillin resistance was detected in 76% (19/25) of resistant S....
Tipo: Info:eu-repo/semantics/article Palavras-chave: Automated system; Vitek2; Gram-positive cocci; Identification; Antimicrobial susceptibility testing.
Ano: 2009 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1413-86702009000200007
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Identification and in vitro production of Lactobacillus antagonists from women with or without bacterial vaginosis BJMBR
Branco,K.M.G.R.; Nardi,R.M.D.; Moreira,J.L.S.; Nunes,A.C.; Farias,L.M.; Nicoli,J.R.; Carvalho,M.A.R..
Lactobacilli isolated from the vaginal tract of women with and without bacterial vaginosis (BV) were identified and characterized for the production of antagonists. Bacterial samples were isolated from healthy women (N = 16), from patients with clinical complaints but without BV (N = 30), and from patients with BV (N = 32). Identification was performed using amplified ribosomal DNA restriction analysis. Production of antagonistic compounds was evaluated by the double-layer diffusion technique using Gram-positive (N = 9) and Gram-negative bacteria (N = 6) as well as yeast (N = 5) as indicator strains. Of a total of 147 isolates, 133 were identified as pertaining to the genus Lactobacillus. Lactobacillus crispatus was the species most frequently recovered,...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Lactobacillus; Bacterial vaginosis; Antagonism; Hydrogen peroxide; Identification.
Ano: 2010 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0100-879X2010000400003
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Identification of fungemia agents using the polymerase chain reaction and restriction fragment length polymorphism analysis BJMBR
Santos,M.S.; Souza,E.S.; Junior,R.M.S.; Talhari,S.; Souza,J.V.B..
Prompt and specific identification of fungemia agents is important in order to define clinical treatment. However, in most cases conventional culture identification can be considered to be time-consuming and not without errors. The aim of the present study was to identify the following fungemia agents: Candida albicans, Candida parapsilosis, Candida tropicalis, Candida glabrata, Cryptococcus neoformans, Cryptococcus gattii, and Histoplasma capsulatum using the polymerase chain reaction and restriction fragment length polymorphism analysis (PCR/RFLP). More specifically: a) to evaluate 3 different amplification regions, b) to investigate 3 different restriction enzymes, and c) to use the best PCR/RFLP procedure to indentify 60 fungemia agents from a culture...
Tipo: Info:eu-repo/semantics/article Palavras-chave: PCR/RFLP; Fungemia agents; Identification; Ddel.
Ano: 2010 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0100-879X2010000800003
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Species distribution and antifungal susceptibility patterns of Candida isolates from a public tertiary teaching hospital in the Eastern Cape Province, South Africa BJMBR
Mnge,P.; Okeleye,B.I.; Vasaikar,S.D.; Apalata,T..
Candida species are the leading cause of invasive fungal infections, and over the past decade there has been an increased isolation of drug resistant Candida species. This study aimed to identify the species distribution of Candida isolates and to determine their unique antifungal susceptibility and resistance patterns. During a cross-sectional study, 209 Candida isolates (recovered from 206 clinical samples) were collected and their species distribution was determined using ChromAgar Candida. The Vitek-2 system (Biomerieux, South Africa) was used to determine minimum inhibitory concentrations (MICs) to azoles (fluconazole, voriconazole), echinocandins (caspofungin, micafungin), polyenes (amphotericin B) and flucytosine. Four species of Candida were...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Candida species; Distribution; Antifungal susceptibility; Identification; South Africa.
Ano: 2017 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0100-879X2017000600702
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Characterization of pathogenic Aeromonas veronii bv. veronii associated with ulcerative syndrome from Chinese longsnout catfish (Leiocassis longirostris Günther) BJM
Cai,Shuang-Hu; Wu,Zao-He; Jian,Ji-Chang; Lu,Yi-Shan; Tang,Ju-Feng.
273 bacterial strains were isolated from 20 Chinese longsnout catfish samples. The biochemical characteristics of all strains conformed to the species description of Aeromonas veronii bv. veronii on the basis of Vitek GNI+ card. Furthermore, 16S rDNA, gyrB and rpoD sequences of the representative strain PY50 were sequenced and showed high similarity with A. veronii bv. veronii in Genbank. Antibiotic-resistance of the representative strain PY50 was assessed by the Kirby-Bauer disk diffusion method, and the results showed it was susceptible and moderately susceptible to 13 and 4 of the 21 antimicrobial agents tested. Extracellular products of strain PY50 contained gelatinase, lecithinase, elastase, most of lipase and lipopolysaccharide. Virulence of strain...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Aeromonas veronii bv. veronii; Ulcerative syndrome; Leiocassis longirostris Günther; Identification.
Ano: 2012 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822012000100046
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Correlation between API 50 CH and multiplex polymerase chain reaction for the identification of vaginal lactobacilli in isolates BJM
Brolazo,Eliane Melo; Leite,Domingos Silva; Tiba,Monique Ribeiro; Villarroel,Marina; Marconi,Camila; Simoes,Jose Antonio.
Identification of Lactobacillus sp. strains by phenotypic methods may lead to doubtful results possibly interfering in the reliability of the epidemiological and probiotics studies. Therefore this study aimed to determine the best methodology for the identification of the large diversity of lactobacilli species found in the vagina by comparing two techniques, one based on their biochemical profile and other employing molecular biology. A carbohydrate fermentation test (API 50 CH) was compared with multiplex polymerase chain reaction (PCR) for the identification of species of vaginal lactobacilli from 135 healthy women. The kappa index was used to evaluate agreement between the methods. Using the molecular technique, L. crispatus (32.6%), L. jensenii (25%)...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Carbohydrate fermentation test; Multiplex PCR; Identification; Vaginal lactobacilli; Vaginal ecosystem.
Ano: 2011 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822011000100028
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Characterization of Lactobacillus from Algerian goat's milk based on phenotypic, 16S rDNA sequencing and their technological properties BJM
Marroki,Ahmed; Zúñiga,Manuel; Kihal,Mabrouk; Pérez-Martínez,Gaspar.
Nineteen strains of Lactobacillus isolated from goat's milk from farms in north-west of Algeria were characterized. Isolates were identified by phenotypic, physiological and genotypic methods and some of their important technological properties were studied. Phenotypic characterization was carried out by studying physiological, morphological characteristics and carbohydrate fermentation patterns using API 50 CHL system. Isolates were also characterized by partial 16S rDNA sequencing. Results obtained with phenotypic methods were correlated with the genotypic characterization and 13 isolates were identified as L. plantarum, two isolates as L. rhamnosus and one isolate as L. fermentum. Three isolates identified as L. plantarum by phenotypic characterization...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Lactic acid bacteria; Lactobacillus; Identification; Goat's milk; Technological properties; Algeria.
Ano: 2011 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822011000100020
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Identification of non-tuberculous mycobacteria from the Central Public Health Laboratory from Mato Grosso do Sul and analysis of clinical relevance BJM
Moraes,Paulo Ricardo de Souza; Chimara,Erica; Telles,Maria Alice da Silva; Ueki,Suely Yoko Misuka; Cunha,Eunice Atsuko Totumi; Honer,Michael Robin; Leão,Sylvia Cardoso.
Non-tuberculous mycobacteria isolated at the Central Public Health Laboratory from Mato Grosso do Sul in 2003 and 2004 were identified by conventional phenotypic methods (TI) and by PCR-Restriction Enzyme Analysis (PRA) using the hsp65 gene as target (PRA-hsp65). With 15 of the 32 analysed isolates, results of both methods were concordant, being 8 Mycobacterium avium, 3 M. fortutium, 1 M. kansasii, 1 M. flavescens, 1 M. peregrinum and 1 Nocardia brasiliensis. TI of 12 isolates was inconclusive. Novel PRA-hsp65 patterns were observed with 11 isolates. Medical data were evaluated for inference of clinical relevance of these isolates.
Tipo: Info:eu-repo/semantics/article Palavras-chave: Mycobacterium; PCR; Identification.
Ano: 2008 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822008000200013
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Antibiotic susceptibility profile of bacilli isolated from the skin of healthy humans BJM
Tarale,Prashant; Gawande,Sonali; Jambhulkar,Vinay.
Abstract In the present work, twelve bacilli were isolated from four different regions of human skin from Bela population of Nagpur district, India. The isolated bacilli were identified by their morphological, cultural and biochemical characteristics. Seven isolates were Gram negative rods, out of which five were belong to genus Pseudomonas. Three among the five Gram positive isolates were identified as Dermabactor and the remaining two Bacillus. Their antimicrobial susceptibility profile was determined by Kirby-Bauer disc diffusion method. The isolates showed resistance to several currently used broad-spectrum antibiotics. The Dermabactor genus was resistant to vancomycin, although it was earlier reported to be susceptible. Imipenem was found to be the...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Antibiotic resistance; Identification; Microflora; Nosocomial; Opportunistic.
Ano: 2015 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822015000401111
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A novel acidophilic, thermophilic iron and sulfur-oxidizing archaeon isolated from a hot spring of tengchong, yunnan, China BJM
Ding,Jiannan; Zhang,Ruiyong; Yu,Yizun; Jin,Decai; Liang,Changli; Yi,Yang; Zhu,Wei; Xia,Jinlan.
A novel thermoacidophilic iron and sulfur-oxidizing archaeon, strain YN25, was isolated from an in situ enriched acid hot spring sample collected in Yunnan, China. Cells were irregular cocci, about 0.9-1.02 µm×1.0-1.31 µm in the medium containing elemental sulfur and 1.5-2.22 µm×1.8-2.54 µm in ferrous sulfate medium. The ranges of growth and pH were 50-85 (optimum 65) and pH 1.0-6.0 (optimum 1.5-2.5). The acidophile was able to grow heterotrophically on several organic substrates, including various monosaccharides, alcohols and amino acids, though the growth on single substrate required yeast extract as growth factor. Growth occurred under aerobic conditions or via anaerobic respiration using elemental sulfur as terminal electron acceptor. Results of...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Isolation; Identification; Acidianus manzaensis; Bioleaching.
Ano: 2011 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822011000200016
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A simple and reliable PCR-restriction fragment length polymorphism assay to identify Candida albicans and its closely related Candida dubliniensis BJM
Ge,Yi Ping; Wang,Le; Lu,Gui Xia; Shen,Yong Nian; Liu,Wei Da.
Candida dubliniensis is an emerging pathogen capable of causing superficial as well as systemic infections. Due to its close similarity to C. albcians, conventional methods based on phenotypic traits are not always reliable in identification of C. dubliniensis. In this study, we developed a PCR-restriction fragment length polymorphism (RFLP) assay to identify and discriminate between the two closely related species. The D1/D2 region of 28S rDNA was amplified by PCR and enzymatically digested by ApaI and BsiEI respectively. PCR products of both species were digested into two fragments by ApaI, but those of other yeast species were undigested. BsiEI cut the PCR products of C. albicans into two fragments but not those of C. dubliniensis. Thus two species were...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Candida albicans; Candida dubliniensis; PCR-restriction fragment length polymorphism; Identification; Differentiation.
Ano: 2012 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822012000300004
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Correlation between API 20 STREP and multiplex PCR for identification of Enterococcus spp. isolated from Brazilian foods BJM
Gomes,Bruna C.; Esteves,Carolina T.; Palazzo,Izabel C.V.; Darini,Ana Lúcia C.; Franco,Bernadette D.G.M.; Martinis,Elaine C.P. de.
We evaluated the suitability of API 20 STREP and multiplex PCR to speciate 52 Enterococcus spp. obtained from Brazilian foods. A high percentage of isolates (78.9%) presented discrepant results between evaluated tests. Similar results were obtained for six E. faecalis and five E. faecium. The PCR multiplex was more effective than API 20 STREP for complete identification of the isolates.
Tipo: Info:eu-repo/semantics/article Palavras-chave: Enterococcus spp.; Identification; API 20 STREP; PCR multiplex; Foods.
Ano: 2007 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822007000400007
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16s-23S rDNA: polymorphisms and their use for detection and identification of Xylella fastidiosa strains BJM
Martinati,Juliana Camargo; Pacheco,Flávia Tereza Hansen; Miranda,Vitor Fernandes Oliveira de; Tsai,Siu Mui.
Strains of Xylella fastidiosa from several hosts (coffee, citrus, grape, almond, oleander, peach, plum, etc.) were characterized by analyzing the content of the nucleotide sequences of 16S-23S rDNA (coding for a small subunit ribosomal RNA) spacer region (ITS). Current methods for sequencing the ITS region yields partial sequences that do not contribute with significant information. According to this fact, new primers have been designed in order to obtain a complete sequence and facilitate the sequencing. The complete 16S-23S sequences from 08 strains were amplified through PCR using the primers designed in our lab. The 16S-23S sequences obtained were compared with 52 others sequences entries in GenBank database. The results revealed a higher level of...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Genetic diversity; 16S-23S rDNA; Intergenic spacer; Identification; Detection.
Ano: 2007 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822007000100033
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