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Use of otoliths to estimate size at sexual maturity in fish BABT
Agostinho,Carlos Sérgio.
The viability of an alternative method for estimating the size at sexual maturity of females of Plagioscion squamosissimus (Perciformes, Sciaenidae) was analyzed. This methodology was used to evaluate the size at sexual maturity in crabs, but has not yet been used for this purpose in fishes. Separation of young and adult fishes by this method is accomplished by iterative adjustment of straight-line segments to the data for length of the otolith and length of the fish. The agreement with the estimate previously obtained by another technique and the possibility of calculating the variance indicates that in some cases, the method analyzed can be used successfully to estimate size at sexual maturity in fish. However, additional studies are necessary to detect...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Otolith; Sexual maturity; Plagioscion squamosissimus.
Ano: 2000 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1516-89132000000400014
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Популяционная структура и условия формирования промыслового запаса хамсы Engraulis encrasicolus у побережья Крыма в осенне-зимний сезон 200/2008 гг. IBSS Repository
Зуев, Г. В.; Гуцал, Д. К.; Репетин, Л. Н.; Салехова, Л. П.; Мельникова, Е. Б.; Бондарев, В. А.; Мурзин, Ю. Л..
С помощью индекса отолитов установлена принадлежность хамсы, зимовавшей в 2007/2008 гг. у юго-западного и южного побережья Крыма, к черноморской популяции. Проанализирована динамика размерно-возрастной и половой структуры популяции в период зимовки, а также динамика промысла. Обсуждаются гидрометеорологические факторы, обусловившие массовую осеннюю миграцию хамсы к черноморскому побережью Крыма.
Tipo: Journal Contribution Palavras-chave: Хамса; Улов; Запас; Популяционная структура; Отолит; Чёрное море; Anchovy; Catch; Stock; Population structure; Otolith; Black Sea; Популяційна структура; Отоліт; Чорне море.
Ano: 2009 URL: http://repository.ibss.org.ua/dspace/handle/99011/841
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Approche quantitative de la fonction de nourricerie jouée par les systèmes vasières-estuaires ArchiMer
Parlier, Emmanuel.
Coastal fish populations settle more or less frequently, at various stages, estuarine systems. Tidal marshes are one of the components of these mosaics of habitats. The first part of this work describes fish assemblages through the utilisation of these systems by fishes analysed in order to propose a revised functional classification of ecological guilds. T h i s new classification is used to compare fish communities of four estuarine systems in the western coast of France: the Mont Saint- Michel Bay, the Saint-Brieuc Bay, the Loire estuary and the Aiguillon Bay. The second part aims at characterizing the nursery function as defined by Beck et al. (2001). Acombinative approach based on gut content analysis, and stable isotope analysis shows that Yo Y s e a...
Tipo: Text Palavras-chave: Isotope ratio; Otolith; Saltmarsh; Nursery; Mont Saint Michel Bay; Saint Brieuc Bay; Aiguillon Bay; Seine estuary; Loire estuary; NEA; Dicentrarchus labrax; Fish communities; Rapports isotopiques; Otolithe; Marais salés; Nourricerie; Baie du Mont Saint Michel; Baie de Saint Brieuc; Baie de l'Aiguillon; Seine; Loire; ANE; Dicentrarchus labrax; Peuplement de poissons.
Ano: 2006 URL: http://archimer.ifremer.fr/doc/2006/these-4601.pdf
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Caractérisation du comportement chimique du complexe otosac-otolithe et réaction à des perturbations induites. ArchiMer
Edeyer, Anaick.
Teleost fish have the capacity to record in their otoliths, calcareous concretions located in the inner ear, the principal events (environmental and physiological) which punctuate their life. Otolith is made of CaC03 deposits on a protein matrix according to a circadian rhythm. Due to the quasi irreversibility of this process, otoliths can be compared to biological archives largely used to apprehend the fish ecology. The otolith bathes in the endolymph, a medium in which all the precursors of otolith formation forward. The endolymph chemical analysis revealed a heterogeneity of its principal components (proteins, total C02 and total Ca) which origin lies in the non uniform spatial distribution of the ionocytes in the saccular epithelium. Thus, in...
Tipo: Text Palavras-chave: Environmental disturbances; Microchemistry; Biomineralisation; Psetta maxima; Fish; Calcification; Endolymph; Otolith; Perturbations environnementales; Microchimie; Biominéralisation; Psetta maxima; Poisson; Calcification; Endolymphe; Otolithe.
Ano: 2000 URL: http://archimer.ifremer.fr/doc/2000/rapport-1123.pdf
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Larval history of glass eels, Anguilla anguilla, (Linne, 1758) in migration in coastal and estuarine areas (Adour, Bay of Biscay) as revealed by otolith structure. ArchiMer
De Casamajor, Marie-noelle; Lecomte Finiger, Raymonde; Prouzet, Patrick.
The embryonic past of glass eels vas studied from the interpretation of microstructures registered on otoliths. The aim of this work is to put in evidence possible seasonal modifications of the growth of otoliths so that differences between otoliths of glass eels caught off marine and estuarine environment. So during the season 1999-2000, from November till March, otolith sampling was realised in the Southwestern part of France, in an estuarine and coastal zone. We observed a spatial and temporal evolution of proportions of the three various types of otoliths taken into account. Glass eels sampled at sea sometimes have a mark on their otoliths indicating the transition in the estuary, especially at the end of the fishing season. Measures of growth marks of...
Tipo: Text Palavras-chave: Migration; Larval past; Golf of Biscay; Glass eels; Otolith; Migration; Passé larvaire; Golfe de Gascogne; Civelle; Otolithe.
Ano: 2001 URL: http://archimer.ifremer.fr/doc/2001/publication-664.pdf
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Influence des variations des facteurs environnementaux sur la croissance de poissons de l'Atlantique ArchiMer
Barrios, Alexander.
The impact of biotic factors such as density-dependent processes, recruitment, total mortality, and abiotic factors such as upwelling intensity, temperature and chlorophyll a concentration on the variation of growth parameters of pelagic and demersal fish were studied during the periods 1990 - 2008 (pelagic) and 1971 - 2015 (demersal). Life history parameters vary according to the species and from one region to another and over time within a given area because of their plasticity and the high fishing pressure. Interspecies and inter-regional comparison were carried out. Non-linear mixed effects models were used on different fish species of the Atlantic Ocean in order to estimate the growth parameters at the individual and population levels. Variations in...
Tipo: Text Palavras-chave: Croissance; Gadidés; Clupéidés; Atlantique; Otolithe; Modèle de von Bertalanffy; Modèles à effets mixtes.; Growth; Gadides; Clupeids; Atlantic; Otolith; Von Bertalanffy growth model; Mixed effects models..
Ano: 2017 URL: http://archimer.ifremer.fr/doc/00419/53026/53960.pdf
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Age and growth of blackfin tuna (Thunnus atianticus) caught under moored fish aggregating devices, around Martinique Island ArchiMer
Doray, Mathieu; Stequert, Bernard; Taquet, Marc.
Daily growth increments measured in the otolith of Thunnus atlanticus were used to estimate the age and growth of individuals. which were sampled from an artisanal fishery operating around fish aggregating devices (FADs) moored off Martinique Island. In this study, 76 otoliths were analysed for fish ranging from 20 to 68 cm fork lengths (FL). The fish were caught using trolling lines at depths ranging from 0 to 10 m. Counts were made, under a light microscope, on the external part of the transverse section of the sagittae, from the primordium to the ventral edge. The mean coefficient of variation of the age reading was 2.4%. To validate readings, the number of increments for 11 individuals was counted using both optic and scanning electron microscopes. The...
Tipo: Text Palavras-chave: Thunnus atlanticus; Daily increment; Otolith; Age.
Ano: 2004 URL: http://archimer.ifremer.fr/doc/2004/publication-396.pdf
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Otolith growth in trout Oncorhynchus mykiss: supply of Ca2+ and Sr2+ to the saccular endolymph ArchiMer
Payan, P; Borelli, G; Priouzeau, F; De Pontual, Helene; Boeuf, G; Mayer Gostan, N.
Kinetic and pharmacological characteristics of Ca2+ fluxes across the saccular epithelium of trout were studied using a perfused isolated inner ear. Ca-45(2+) influx from the Ringer solution to the endolymph was 3-4 nmoles h(-1) mu(-1) endolymph, which corresponds to a global turnover rate of the endolymph calcium of 200% h(-1). Ca2+ entry into the proximal endolymph was faster than into the distal fluid. Net Ca2+ movement across the saccular epithelium depended on the direction and intensity of the chemical gradient of calcium between the Ringer solution and the endolymph. Increasing the calcium concentration in the Ringer solution up to 4.4 mmol l(-1) provoked an accumulation of Ca2+ in both proximal and distal endolymphs, and equilibrium was reached...
Tipo: Text Palavras-chave: Inner ear; Perfusion; Otolith; Endolymph; Flux; Calcium; Oncorhynchus mykiss; Trout.
Ano: 2002 URL: http://archimer.ifremer.fr/doc/2002/publication-416.pdf
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Growth and age estimation of the greater forkbeard, Phycis blennoides (Actinopterygii: Gadiformes: Phycidae), from the Gulf of Tunis (central Mediterranean) ArchiMer
Romdhani, Ahlem; Ktari, Mohamed-hedi; Dufour, Jean-louis; Mahe, Kelig; Francour, Patrice.
Background. The greater forkbeard, Phycis blennoides (Brünnich, 1768), is a gadiform species, which has economical value and its population is dwelling in a 60–800 m depth range throughout the Atlantic and the Mediterranean. Along African north coast, there is a lack of information about the biology (age, growth, sex-ratio) of this species. This study provides the first data on population parameters of P. blennoides in Tunisia. Materials and Methods. Specimens of Phycis blennoides were collected from the landings of the artisanal fisheries between September 2007 and June 2010. The length–weight relations were determined according to the allometric equation: W = aTLb. Growth parameters were estimated using the von Bertalanffy growth equation. Results....
Tipo: Text Palavras-chave: Otolith; Biological traits; Length-weight relation; Von Bertalanffy growth function.
Ano: 2016 URL: https://archimer.ifremer.fr/doc/00324/43532/43077.pdf
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Daily variations of the saccular endolymph and plasma compositions in the turbot Psetta maxima: relationship with the diurnal rhythm in otolith formation ArchiMer
Edeyer, Anaick; De Pontual, Helene; Payan, P; Troadec, Herve; Severe, Armelle; Mayer-gostan, N.
We studied the circadian variations of the ionic composition ([Na+], [K+], [Cl-]), total CO2 ([tot CO2]), and protein concentration ([protein]) in the plasma and endolymph in the distal and proximal sides of the sacculus in the turbot Psetta maxima. Daily variations in total plasma calcium ([tot Ga]) were also recorded. Significant diurnal fluctuations occurred in most parameters and the spatial heterogeneity of the endolymph composition was maintained throughout a 24 h period. The main parameters implicated in otolith calcification, endolymph [tot CO2] and endolymph [protein], fluctuated diurnally, [tot CO2] was highest and [protein] lowest at night; the relative concentrations were reversed during the day. The inverse, alternating relationship of maximal...
Tipo: Text Palavras-chave: Daily cycle; Endolymph; Otolith; Chemical composition; Teleost.
Ano: 2000 URL: http://archimer.ifremer.fr/doc/00000/10572/7603.pdf
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Frequency demodulation on otolith numerical images for the automation of fish age estimation ArchiMer
Troadec, Herve.
A method to assist the reading of calcified structures with digital images is proposed. An a priori growth pattern is introduced in the image processing to take into account both the variability of the ring size and the non-linearity of their growth. The introduction of biological knowledge is performed within a demodulation processing using the reciprocal growth function. The ring number is estimated by spectral analysis. The constraints introduced by the growth model are weak since they are restricted to the definition of L0, in the case of an exponential model, or of L∞ in the case of a Von Bertalanffy model. When applied to larval Dover sole otoliths (Solea solea) results close to the expert's are obtained. In the case of saithe otoliths (Pollachius...
Tipo: Text Palavras-chave: Otolithe; Image numérique; Âge; Croissance; Solea solea / Pollachius virens; Otolith; Digital image; Age; Growth; Solea solea / Pollachius virens.
Ano: 1991 URL: http://archimer.ifremer.fr/doc/00189/30072/28560.pdf
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Daily variations of endolymph composition: relationship with the otolith calcification process in trout ArchiMer
Borelli, G; Guibbohni, M; Mayer Gostan, N; Priouzeau, France; De Pontual, Helene; Allemand, D; Puverel, S; Tambutte, E; Payan, P.
Ionic and organic parameters of the otolith calcification process in the trout Oncorhynchus mykiss were analysed in plasma and endolymph over the day:night cycle. Plasma pH remained constant and total CO2 concentration was significantly lower (by 21%) during the day than at night. Calcifying parameters (total CO2, total calcium concentration) were measured in the proximal and distal endolymphs and were unchanged in the latter during the day:night cycle, but fluctuated in the former. Non-collagenous protein and collagen concentrations in endolymph were higher (1.5- and 10-fold, respectively) during the day than at night. As there was no change in total calcium concentration, we propose that Ca2+ increases during the dark period and was maximal by the end of...
Tipo: Text Palavras-chave: Endolymph; Day night cycle; Calcification; Otolith.
Ano: 2003 URL: https://archimer.ifremer.fr/doc/2003/publication-418.pdf
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Modélisation biophysique pour la prévision du recrutement ArchiMer
Allain, Gwenhael.
Exploited fish populations are dependent on recruitment (i.e. size of the new year class) to sustain their abundance. Recruitment variations are related to hydroclimatic variations and may accentuate the detrimental effects of fishing. Recruitment prediction requires accurate fisheries oceanographic tools, which are expected to be more reliable than large-scale correlation analyses between fish abundance and climate variables. Recruitment is the result of the integration over a season and large oceanic areas of processes affecting larval survival, which are dependent on small-scale mechanisms. Hydrodynamic models are a tool to perform this integration. This thesis aims at exploring and modelling physical-biological interaction mechanisms in order to...
Tipo: Text Palavras-chave: Anchovy; Upwelling; Turbulence; Retention; Fisheries management; Population dynamics; Stock environment interaction; Stock recruitment relation; Scale integration; Individual based models; Survival; Growth; Otolith; Physical biological interactions; Prediction; Recruitment; Turbulence; Rétention; Méso échelle; Intégration des échelles; Modèle de survie; Modèle de ponte; Modèles individu centrés; Modèles de corrélation; Modèles stochastiques; Juvéniles; Larves; Otolithe; Modèle de croissance; Interactions physique biologie; Prévision; Recrutement.
Ano: 2004 URL: http://archimer.ifremer.fr/doc/2004/these-5.pdf
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Temperature, selective mortality and early growth in the short-lived clupeid Spratelloides gracilis ArchiMer
Durieux, Eric; Meekan, Mark G.; Ponton, Dominique; Vigliola, Laurent.
Six cohorts of the silver-stripe round herring Spratelloides gracilis, a fast-growing and short-lived tropical clupeid, were collected as juveniles and then as adults during austral summers from November to February in 1998–1999 and 1999–2000, using light traps in the Dampier Archipelago, Western Australia. Otolith analysis allowed backcalculation of size and growth rate at age to examine the relative influences of selective mortality and water temperature on early growth. Negative sizeselective mortality and growth-selective mortality between the juvenile and the adult stages was found only in the cohort that was the smallest and slowest growing in the period immediately following hatching. Selective mortality preferentially removed members of this cohort...
Tipo: Text Palavras-chave: Environmental factors; Indo-Pacific region; Life-history traits; Otolith; Pelagic fishes; Size.
Ano: 2009 URL: http://archimer.ifremer.fr/doc/00008/11940/8643.pdf
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Synthèse française des procédures d'estimation d'âge ArchiMer
Mahe, Kelig; Bellail, Robert; Dufour, Jean-louis; Boiron-leroy, Anne; Dimeet, Joel; Duhamel, Erwan; Elleboode, Romain; Felix, Jerome; Grellier, Patrick; Huet, Jerome; Labastie, Jacques; Le Roy, Didier; Lizaud, Oceann; Manten, Marie-line; Martin, Stephane; Metral, Luisa; Nedelec, Daniel; Verin, Yves; Badts, Vincent.
This document presents all the techniques used in routine by Ifremer to estimate the age of fish from the calcified piece. The procedure for estimating age describes each technical stage from the taking of the calcified piece through to the supplying of key sizes/ages to the European work groups. This procedure is specific to each species and even each population of fish.
Tipo: Text Palavras-chave: Poisson; TNPC; Préparation; Procédure; Age; Ecaille; Illicium; Otolithe; Sclérochronologie; Fish; TNPC; Preparation; Procedure; Age; Scale; Illicium; Otolith; Sclerochronology.
Ano: 2009 URL: http://archimer.ifremer.fr/doc/00000/7294/rapport-7294.pdf
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Growth of the oblique-banded grouper (Epinephelus radiatus) on the coasts of Reunion Island (SW Indian Ocean) ArchiMer
Mahe, Kelig; Rabhi, Khalef; Bellamy, Elise; Elleboode, Romain; Aumond, Yoann; Huet, Jerome; Cresson, Pierre; Roos, David.
The oblique-banded grouper, Epinephelus radiatus (Day, 1968), occurred within the whole Indo- West Pacific where it is harvested by small-scale coastal fisheries. The aim of this study was to estimate the growth of this species at Reunion Island (South-West Indian Ocean) since no study investigated this topic so far. Fifty-seven individuals were sampled in the landings of the French local artisanal fisheries from March 2014 to March 2015. The relationships between two types of body length (total and standard lengths, cm) and total weight (g) were significant (p < 0.05). Total length-weight relationship was described by the following parameters: a = 0.01 and b = 3.098. For each individual, morphometry of the whole otolith was described with several...
Tipo: Text Palavras-chave: Epinephelidae; Epinephelus radiatus; Otolith; Indian Ocean; Ageing; Otolith weight.
Ano: 2016 URL: http://archimer.ifremer.fr/doc/00313/42385/41723.pdf
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Modeling larval dispersal for the gilthead seabream in the northwestern Mediterranean sea ArchiMer
Lett, Christophe; Barrier, Nicolas; Ourmières, Yann; Petit, Cécile; Labonne, Maylis; Bourjea, Jerome; Darnaude, Audrey M..
To investigate dispersal and connectivity between spawning and lagoon nursery habitats of the gilthead seabream, Sparus aurata, in the Gulf of Lions (northwestern Mediterranean Sea), we modeled the potential transport of the species’ larvae between its supposed main spawning site in the region (the Planier Island) and two of its main local nursery areas (the coastal lagoons of Thau and Salses-Leucate). Passive larval drift simulations using a dispersal biophysical model showed a large variability in the possible trajectories from spawning to nursery areas and in the predicted ages for larvae arrival on the two nursery sites. The most common ages at arrival obtained in the simulations (20–60 days) are broadly consistent with previous modeling studies but...
Tipo: Text Palavras-chave: Sparus aurata; Gulf of Lions; Fish; Larvae; Models-hydrodynamic; Biophysical model; Connectivity; Otolith.
Ano: 2019 URL: https://archimer.ifremer.fr/doc/00513/62470/66903.pdf
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Compréhension des mécanismes de Biominéralisation de l'otolithe : quantification spatialisée des fractions minérale et organique et influence des facteurs environnementaux ArchiMer
Jolivet, Aurelie.
Despite numerous applications on the use of otoliths at both population and individual levels, knowledge regarding the mechanisms of the otolith and their variations with environmental and physiological factors has to be improved. In particular, the characterization of mineral and organic fractions of the otolith structures and the influence of their qualitative and quantitative composition on the opacity remain poorly documented. Yet this information is of key interest for the calibration of the archive "otolith" allowing a robust analysis of information. The first issue of this study focused on the analysis of the opacity and the effects of temperature, growth and metabolism through experiments in controlled conditions. Results led to the modelling of...
Tipo: Text Palavras-chave: Merluccius merluccius; Otolithe; Microstructures; Macrostructures; Opacité; Spectrométrie RAMAN; Merluccius merluccius; Otolith; Microstructures; Macrostructures; Opacity; RAMAN Spectrométry.
Ano: 2009 URL: http://archimer.ifremer.fr/doc/00035/14649/11937.pdf
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Recherche des marqueurs d'exposition aux contaminants et de fréquentation des habitats chez l'anguille Anguilla anguilla de l'estuaire de l'Adour : de la réponse moléculaire à la microchimie de l'otolithe ArchiMer
Tabouret, Helene.
In a context of decline of European eel (Anguilla anguilla L.) and search for biological markers of habitat use and quality, a multidisciplinary approach was engaged on the Adour estuary and its associated wetlands. Two axes were developed. The first axe aimed at highlighting the successive presence of the species in different ecosystems based on the otolith elemental composition. The second aimed at the evaluation of the chemical pressure underwent by eels based on the contaminant bioconcentration in soft tissues and the early molecular response to the chemical stress. With a view to the analyses of otolith elemental composition taking into account the 3D structure, the low elemental concentration in the matrix and keeping the finest spatial resolution,...
Tipo: Text Palavras-chave: Adour; Polychlorinated biphenyls; Mercury; CYP1A1; Fs LA ICP MS; Microchemistry; Otolith; Anguilla anguilla; Adour; Polychlorobiphényles; Mercure; CYP1A1; Fs LA ICP MS; Microchimie; Otolithe; Anguilla anguilla.
Ano: 2009 URL: http://archimer.ifremer.fr/doc/2009/these-7381.pdf
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Utility of mixed effects models to inform the stock structure of whiting in the Northeast Atlantic Ocean ArchiMer
Barrios, Alexander; Ernande, Bruno; Mahe, Kelig; Trenkel, Verena; Rochet, Marie-joelle.
Stock structure of whiting (Merlangius merlangus) in the North East Atlantic is unclear. This study uses mixed effects models to analyse growth variability as a way to investigate stock identification. Growth trajectories for 634 individuals and length-at-age data for 78,686 individuals were analysed for spatial coherence and temporal synchrony in the parameters of the von Bertalanffy growth model. Growth was found to differ among most ICES divisions, and temporal fluctuations were poorly synchronized between areas. This study illustrates how growth analyses can contribute to stock identification, in addition to other data.
Tipo: Text Palavras-chave: Growth; Whiting; North East Atlantic; Otolith; Von Bertalanffy growth model; Mixed effects models.
Ano: 2017 URL: http://archimer.ifremer.fr/doc/00373/48415/48810.pdf
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