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Prediction of the amount of secondary structure of proteins using unassigned NMR spectra: a tool for target selection in structural proteomics Genet. Mol. Biol.
Moreau,Vitor Hugo; Valente,Ana Paula; Almeida,Fábio C.L..
With the advent of structural genomics, the need for fast structural information about unknown proteins has increased. We describe a new methodology, based on 13C, 15N and ¹H chemical shift dispersion to predict the amount of secondary structure of unassigned proteins from their 15N- and/or 13C-edited heteronuclear single quantum coherence (HSQC) spectra. This methodology has been coded into a software called PASSNMR (Prediction of the Amount of Secondary Structure by Nuclear Magnetic Resonance), which can be accessed directly from the Internet. PASSNMR program is a powerful tool for screening proteins for proteomic or structural genomic investigations when used with recent methodologies that take advantage of the use of the antibiotic rifampicin to...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Chemical shift dispersion; PASSNMR; Prediction of secondary structure; Structural proteomics; Target selection.
Ano: 2006 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572006000400030
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