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Comparative methods in R hackathon Nature Precedings
Brian O'Meara; Michael Alfaro; Charles Bell; Benjamin Bolker; Marguerite Butler; Peter Cowan; Damien de Vienne; Richard Desper; Joseph Felsenstein; Luke Harmon; Christoph Heibl; Andrew Hipp; Gene Hunt; Thibaut Jombart; Steve Kembel; Hilmar Lapp; Scott Loarie; Wayne Maddison; Peter Midford; David Orme; Emmanuel Paradis; Sam Price; Dan Rabosky; Brian Sidlauskas; Stacey Smith; Dave Swofford; Todd Vision; Peter Waddell; Amy Zanne; Derrick Zwickl.
The R statistical analysis package has emerged as a popular platform for implementation of powerful comparative methods to understand the evolution of organismal traits and diversification. A hackathon was organized to bring together active R developers as well as end-users working on the integration of comparative phylogenetic methods within R to actively address issues of data exchange standards, code interoperability, usability, documentation quality, and the breadth of functionality for comparative methods available within R. Outcomes included a new base package for phylogenetic trees and data, a public wiki with tutorials and overviews of existing packages, code to allow Mesquite and R to interact, improvement of existing packages, and increased...
Tipo: Poster Palavras-chave: Ecology; Bioinformatics.
Ano: 2008 URL: http://precedings.nature.com/documents/2126/version/1
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Intra-specific variation in plant hydraulic sectoriality along a latitudinal gradient Nature Precedings
Angela Zeng; Roberto Salguero-Gomez; Agustin Santos-Alvarez; Amy Zanne; Brenda Casper.
High temperatures and nutrient limitations in deserts challenge plant survival. Large temperature oscillations and droughts typical of cold deserts can result in cavitation, the precipitation of dissolved air within a xylem vessel. If xylem vessels are closely packed, then a cavitation event may expand to neighboring vessels, resulting in runaway embolism, and potentially paralyze the vital functions of the plant.
 Hydraulic sectoriality, where the plant is functionally composed of independent hydraulic units, has been suggested as a strategy to decrease the risk associated with cavitation. This can occur by increasing xylem vessel isolation and/or increasing the physical modularity of the plant. Furthermore, hydraulic sectoriality...
Tipo: Poster Palavras-chave: Ecology; Plant Biology; Evolutionary Biology.
Ano: 2010 URL: http://precedings.nature.com/documents/5277/version/1
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