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DNA methylation reprogramming, TE derepression, and postzygotic isolation of nascent animal species ArchiMer
Laporte, M.; Le Luyer, Jeremy; Rougeux, C.; Dion-côté, A.-m.; Krick, M.; Bernatchez, L..
The genomic shock hypothesis stipulates that the stress associated with divergent genome admixture can cause transposable element (TE) derepression, which could act as a postzygotic isolation mechanism. TEs affect gene structure, expression patterns, and chromosome organization and may have deleterious consequences when released. For these reasons, they are silenced by heterochromatin formation, which includes DNA methylation. Here, we show that a significant proportion of TEs are differentially methylated between the “dwarf” (limnetic) and the “normal” (benthic) whitefish, two nascent species that diverged some 15,000 generations ago within the Coregonus clupeaformis species complex. Moreover, TEs are overrepresented among loci that were demethylated in...
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Ano: 2019 URL: https://archimer.ifremer.fr/doc/00586/69819/67709.pdf
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Divergence in physiological factors affecting swimming performance between anadromous and resident populations of brook charr Salvelinus fontinalis ArchiMer
Crespel, Amelie; Dupont-prinet, A.; Bernatchez, L.; Claireaux, Guy; Tremblay, R.; Audet, C..
In this study, an anadromous strain (L) and a freshwater-resident (R) strain of brook charr Salvelinus fontinalis as well as their reciprocal hybrids, were reared in a common environment and submitted to swimming tests combined with salinity challenges. The critical swimming speeds (Ucrit) of the different crosses were measured in both fresh (FW) and salt water (SW) and the variations in several physiological traits (osmotic, energetic and metabolic capacities) that are predicted to influence swimming performance were documented. Anadromous and resident fish reached the same Ucrit in both FW and SW, with Ucrit being 14% lower in SW compared with FW. The strains, however, seemed to use different underlying strategies: the anadromous strain relied on its...
Tipo: Text Palavras-chave: Hybrids; Local adaptation; Metabolism; Swimming performance.
Ano: 2017 URL: https://archimer.ifremer.fr/doc/00376/48703/49288.pdf
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Molecular phylogeny and phylogeography of the Cuban cave-fishes of the genus Lucifuga: Evidence for cryptic allopatric diversity OceanDocs
García-Machado, E.; Hernández, D.; García-Debrás, A.; Chevalier-Monteagudo, P.; Metcalfe, C.; Bernatchez, L.; Casane, D..
Underground environments are increasingly recognized as reservoirs of faunal diversity. Extreme environmental conditions and limited dispersal ability of underground organisms have been acknowledged as important factors promoting divergence between species and conspecific populations. However, in many instances, there is no correlation between genetic divergence and morphological differentiation. Lucifuga Poey is a stygobiotic fish genus that lives in Cuban and Bahamian caves. In Cuba, it offers a unique opportunity to study the influence of habitat fragmentation on the genetic divergence of stygobiotic species and populations. The genus includes four species and one morphological variant that have contrasting geographical distributions. In this study, we...
Tipo: Journal Contribution Palavras-chave: Fish; Phylogeny.
Ano: 2011 URL: http://hdl.handle.net/1834/4138
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