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Complex small pelagic fish population patterns arising from individual behavioral responses to their environment ArchiMer
Brochier, Timothee; Auger, Pierre-amael; Pecquerie, Laure; Machu, Eric; Capet, Xavier; Thiaw, Modou; Mbaye, Baye Cheikh; Braham, Cheikh-baye; Ettahiri, Omar; Charouki, Najib; Sene, Ousseynou Ndaw; Werner, Francisco; Brehmer, Patrice.
Small pelagic fish (SPF) species are heavily exploited in eastern boundary upwelling systems (EBUS) as their transformation products are increasingly used in the world food chain. Management relies on regular monitoring, but there is a lack of robust theories for the emergence of the populations’ traits and their evolution in highly variable environments. This work aims to address existing knowledge gaps by combining physical and biogeochemical modelling with an individual life-cycle based model applied to round sardinella (Sardinella aurita) off northwest Africa, a key species for regional food security. Our approach focused on the processes responsible for seasonal migrations, spatio-temporal size-structure, and interannual biomass fluctuations....
Tipo: Text Palavras-chave: Small pelagic fish; Sardinella aurita; Fish migration; Eastern boundary upwelling system; Individual based biophysical models; Dynamic energy budget.
Ano: 2018 URL: https://archimer.ifremer.fr/doc/00433/54433/56088.pdf
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Methanogenic and fertilizing potential of aquaculture waste: towards freshwater farms energy self‐sufficiency in the framework of blue growth ArchiMer
Ndiaye, Ndeye Aida; Maiguizo-diagne, Halima; Diadhiou, Hamet Diaw; Ndiaye, Waly Ndianco; Diedhiou, Fulgence; Cournac, Laurent; Gaye, Mohamed Lamine; Fall, Saliou; Brehmer, Patrice.
he fisheries sector, particularly aquaculture, is a fundamental source of nutrition for humans, particularly in developing countries. The modern development of fish farming requires energy for production systems. This study investigates the potential of using organic wastes derived from fish fattening to produce on‐farm energy through the process of methanization. Oreochromis niloticus faeces methanogen potential was determined with (IFF) and without (UIFF) methanizer microbial inoculum. At the end of the manure methanation trials, the resulting digestates were tested as organic fertilizers for agriculture. The tests showed that inoculated fish faeces had faster biogas kinetics production compared with uninoculated fish faeces. In both cases, the produced...
Tipo: Text Palavras-chave: Biogas; Digests; Energy recovery; Fish faeces; Methanation; Sustainable science.
Ano: 2020 URL: https://archimer.ifremer.fr/doc/00588/70033/70230.pdf
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Spatial and Seasonal Variability of Mixed Layer Depth in the Tropical Atlantic at 10 °W using 40 Years of Observation Data ArchiMer
Kouame Kanga, Désiré; Kouassi Aka, Marcel; Trokourey, Albert; Toualy, Elisée; N’guessan, Benjamin K.; Brehmer, Patrice; Ostrowski, Marek.
The spatial and seasonal variability of the mixed layer depth (MLD) was studied using hydrological data from several databases collected over the period October 1973 to March 2017 at 10 °W between latitudes 2 °N and 10 °S in the Gulf of Guinea. The density threshold method with 0.03 kg m-3 criterion was used to calculate the MLD. In the equatorial band, the seasonal average MLD is 20 m whatever the season. At 6 °S and 10 °S, the MLD is relatively higher during the cold season. The MLD varies between 21 and 37 m at 6 °S, and the seasonal averages MLD are 21 and 40 m respectively during the hot and cold seasons. At 10 °S, during the hot season, the MLD varies between 28 and 52 m and the seasonal average is 39.5 m. During the cold season, the MLD varies...
Tipo: Text Palavras-chave: Atlantic Ocean; Gulf of Guinea; Mixed Layer; Spatial Variability; Seasonal Variability..
Ano: 2021 URL: https://archimer.ifremer.fr/doc/00684/79619/82344.pdf
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Schooling behaviour of small pelagic fish: phenotypic expression of independent stimuli ArchiMer
Brehmer, Patrice; Gerlotto, François; Laurent, Charline; Cotel, Pascal; Achury, Alina; Samb, Birane.
We compared echo sounder measurements of fish schools on Venezuelan and Senegalese coastal shelves. In both areas Sardinella aurita was the predominant aggregative species; the stocks are known to be genetically independent. Persistent school typology is described by analysing 7 acoustic surveys in Venezuela and comparing with pioneer observations in Senegal. The echo types encountered in both countries were comparable, with S. aurita and their associated species having comparable schooling behaviour. School morphology appears to be more related to species than to global characteristics of their ecosystems, as fish school descriptors were similar for both stocks. Nevertheless, S. aurita may adopt different school morphologies. Differentiation between day...
Tipo: Text Palavras-chave: Small pelagic fish; Schooling; Phenotypic expression; In situ observations; Echo type; Diel cycle; Behaviour.
Ano: 2007 URL: http://archimer.ifremer.fr/doc/2007/publication-2536.pdf
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Spatial distribution of main clupeid species in relation to acoustic assessment surveys in the continental shelves of Senegal and The Gambia ArchiMer
Sarre, Abdoulaye; Krakstad, Jens-otto; Brehmer, Patrice; Mbye, Ebou Mass.
This work compiles hydroacoustic recordings and catch data over Senegambia (Senegal and The Gambia) from assessment surveys on the major clupeid species to identify sources of bias in abundance estimates caused by their horizontal distribution. The latitudinal distribution of small pelagic fish is often well known, while their "across shelf" distribution on the continental shelf is less understood. The southern part of the Senegambian shelf has a wide shallow water (< 10 m) area that makes up 20% (1500NM(2)) of the total shelf surface, while the northern part accounts for 3% (200NM(2)). These areas are not assessed by conventional fisheries acoustics surveys and therefore increase the uncertainty of the assessment of these species. Our findings show...
Tipo: Text Palavras-chave: Fish distribution; Ethmalosa fimbriata; Ilisha africana; Sardinella spp.; West Africa.
Ano: 2018 URL: https://archimer.ifremer.fr/doc/00426/53765/72090.pdf
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Studying the contribution of different fishing gears to the Sardinella small-scale fishery in Senegalese waters ArchiMer
Diankha, Ousmane; Demarcq, Herve; Fall, Massal; Thiao, Djiga; Thiaw, Modou; Sow, Bamol Ali; Gaye, Amadou Thierno; Brehmer, Patrice.
This study investigated variations of landings of two key species, Sardinella aurita and Sardinella maderensis, in Senegalese waters over a ten-year period (2004-2013). Using generalized additive models, it was found that fishing gear played a major role in explaining differences in monthly landings for both species (51-71% deviance explained). Its effect was more significant in the southern part of Senegal. Fishing effort (number of trips) accounted only for 4-18% of variability in landings. Purse seine (PS) fishing was the most important contributor to the landings of both species. In addition, in the southern area, surrounding gillnet fishing was also important for S. maderensis. Modeling results showed that the relationship between monthly effort and...
Tipo: Text Palavras-chave: Effects of fishing; Generalized additive model; Sardinella aurita; Sardinella maderensis; Purse seine; Surrounding gillnet; Senegal.
Ano: 2017 URL: https://archimer.ifremer.fr/doc/00616/72808/72585.pdf
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Towards an Autonomous Pelagic Observatory: Experiences from Monitoring Fish Communities around Drifting FADs ArchiMer
Brehmer, Patrice; Sancho, Gorka; Trygonis, Vasilis; Itano, David; Dalen, John; Fuchs, Ariel; Faraj, Abdelmalek; Taquet, Marc.
This work presents a methodological synthesis for the in situ monitoring of fish aggregating devices (FADs) using a combination of optical, echosounder and SCUBA observations conducted in the vicinity of drifting FADs. The acoustic methods allowed, according to the devices used, the description of the spatial organisation and dynamics of biotic scattering layers, individual fishes, schools, shoals and mammals, while visual, photographic and video observations permitted species identification within a range of 0 to ~ 25 m. Based on these results, we elaborate on the interest to combine acoustic and visual methods, and present an autonomous instrumented drifting buoy for remotely monitoring fish diversity and abundance in the pelagic ecosystems. The...
Tipo: Text Palavras-chave: Optical; Census; Acoustics; Buoy; Seaorbiter; Biomonitoring; Conservation; Environmental monitoring; Fish; Pelagic.
Ano: 2019 URL: https://archimer.ifremer.fr/doc/00461/57252/59265.pdf
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New applications of hydroacoustic methods for monitoring shallow water aquatic ecosystems: the case of mussel culture grounds ArchiMer
Brehmer, Patrice; Gerlotto, François; Guillard, Joelle; Sanguinede, Fabien; Guennegan, Yvon; Buestel, Dominique.
The development of acoustics tools and methods for monitoring anthropized ecosystems represents a new field for the application of acoustics. Monitoring such an environment was not possible with single vertical echo sounders, due to the fact that the artificial structures and the natural targets were not distinguishable. Monitoring data were collected along the French Mediterranean coastline, during five short surveys of mussel culture longline areas. Both the Reson Seabat 6012 multibeam sonar (455 kHz) and the Simrad SR 240 omnidirectional sonar (23.75 kHz) were used for target detection. The former tools allow accurate allocation of the different types of echoes to artefacts, fish schools and scattered fish. The school characteristics collected included...
Tipo: Text Palavras-chave: Ecosystem; Artificial reef; Mussel longline; Fish school; Monitoring; Multibeam sonar.
Ano: 2003 URL: http://archimer.ifremer.fr/doc/2003/publication-574.pdf
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Resilience of Key Biological Parameters of the Senegalese Flat Sardinella to Overfishing and Climate Change ArchiMer
Ba, Kamarel; Thiaw, Modou; Lazar, Najih; Sarr, Alassane; Brochier, Timothee; Ndiaye, Ismaila; Faye, Alioune; Sadio, Oumar; Panfili, Jacques; Thiaw, Omar Thiom; Brehmer, Patrice.
The stock of the Senegalese flat sardinella, Sardinella maderensis, is highly exploited in Senegal, West Africa. Its growth and reproduction parameters are key biological indicators for improving fisheries management. This study reviewed these parameters using landing data from small-scale fisheries in Senegal and literature information dated back more than 25 years. Age was estimated using length-frequency data to calculate growth parameters and assess the growth performance index. With global climate change there has been an increase in the average sea surface temperature along the Senegalese coast but the length-weight parameters, sex ratio, size at first sexual maturity, period of reproduction and condition factor of S. maderensis have not changed...
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Ano: 2016 URL: https://archimer.ifremer.fr/doc/00616/72851/72887.pdf
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Contrasted optimal environmental windows for both sardinella species in Senegalese waters ArchiMer
Diankha, Ousmane; Ba, Aliou; Brehmer, Patrice; Brochier, Timothee; Sow, Bamol Ali; Thiaw, Modou; Gaye, Amadou Thierno; Ngom, Fambaye; Demarcq, Herve.
We investigate Sardinella aurita and Sardinella maderensis recruitment success relative to the variability of oceanographic conditions in Senegalese waters using generalized additive models (GAM). Results show that recruitment of both species is marked by a strong intra-annual (seasonal) variation with minimum and maximum in winter and summer, respectively. Their interannual variations are synchronous until 2006 (recruitment decreasing), while from 2007 there is no synchrony. The model developed shows that sardinella recruitment variability is closely related to the tested environmental variables in the study area. However, the key environmental variables influencing the recruitment success are different for both species: the Coastal Upwelling Index and...
Tipo: Text Palavras-chave: Recruitment success; Sardinella aurita; Sardinella maderensis; Upwelling; West Africa.
Ano: 2018 URL: https://archimer.ifremer.fr/doc/00611/72299/71189.pdf
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On the robustness of an eastern boundary upwelling ecosystem exposed to multiple stressors ArchiMer
Diogoul, Ndague; Brehmer, Patrice; Demarcq, Herve; El Ayoubi, Salaheddine; Thiam, Abou; Sarre, Abdoulaye; Mouget, Anne; Perrot, Yannick.
The resistance of an east border upwelling system was investigated using relative index of marine pelagic biomass estimates under a changing environment spanning 20-years in the strongly exploited southern Canary Current Large marine Ecosystem (sCCLME). We divided the sCCLME in two parts (north and south of Cap Blanc), based on oceanographic regimes. We delineated two size-based groups (“plankton” and “pelagic fish”) corresponding to lower and higher trophic levels, respectively. Over the 20-year period, all spatial remote sensing environmental variables increased significantly, except in the area south of Cap Blanc where sea surface Chlorophyll-a concentrations declined and the upwelling favorable wind was stable. Relative index of marine pelagic...
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Ano: 2021 URL: https://archimer.ifremer.fr/doc/00676/78789/81019.pdf
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Total admissible catches and experimental fishing quotas in the pink lobster (Palinurus mauritanicus, Gruvel 1911): A new opportunity for economic development in West Africa? ArchiMer
Kane, Ea; Ball, Ac; Brehmer, Patrice.
Over the last thirty years, the poor state of certain fish stocks in the Large Marine Ecosystem of the Canary Current gradually revealed the limits of the West African fisheries management. The Ecosystem Approach advocated in Mauritania, calls to change the perception of fisheries management to incorporate participatory management considerations total admissible catches (TACs) and fishing quotas. An experiment around, a total allowable capture of 800 tons of pink lobster (Palinurus mauritanicus) is at the heart of this approach using methodological tools of analysis / assessment of the economic performance of crawfish exploratory fishery. Survey results show that during the period from February 2015 to January 2016, the fishery was based on a total of 23...
Tipo: Text Palavras-chave: Palinurus mauritanicus; Economic performance; European fleet; Turnover; Added value; Mauritania; West Africa.
Ano: 2019 URL: https://archimer.ifremer.fr/doc/00514/62524/69274.pdf
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Variability of key biological parameters of round sardinella Sardinella aurita and the effects of environmental changes ArchiMer
Balde, Bocar Sabaly; Sow, Fambaye N.; Ba, Kamarel; Ekau, Werner; Brehmer, Patrice; Kantoussan, Justin; Fall, Massal; Diouf, Malick.
We examined growth rates and reproductive characteristics of Sardinella aurita off Senegal and other coastal areas over a 20 year period (1995-2014) to determine how they relate to variations in environmental characteristics of coastal waters. Based on fish length-frequency data and a coastal upwelling index, we found that S. aurita recruitment tends to occur during the periods of most intensive upwelling (March-April off Senegal). Peak reproduction corresponds to periods of low sea-surface temperature (in February or March). The sex ratio was remarkably consistent during the 30 year study period and so was not affected by environmental changes. We hypothesise that S. aurita takes advantage of the higher zooplankton productivity that occurs in coastal...
Tipo: Text Palavras-chave: Data poor fisheries; Environmental variability; Size structure; Small pelagic; Spawning period; West Africa.
Ano: 2019 URL: https://archimer.ifremer.fr/doc/00491/60229/67183.pdf
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Vessel Avoidance Response: A Complex Tradeoff Between Fish Multisensory Integration and Environmental Variables ArchiMer
Brehmer, Patrice; Sarré, Abdoulaye; Guennegan, Yvon; Guillard, Jean.
The avoidance reaction by fish in front of an approaching vessel is a major source of bias in direct biomass assessment and ecological studies based on fisheries acoustics data. An experiment was carried out to compare echosounder data obtained using a small speedboat and a research fisheries vessel generating significant higher noise above conventional reduced-noise standard. The results show that there was no significant difference between the individual fish target strength distributions, and the numbers of schools recorded by both boats, these schools having similar areas and perimeters. However, the schools detected by the noisier vessel were significantly deeper, and unexpectedly had a significantly higher energy level. These findings suggest that...
Tipo: Text Palavras-chave: Vessel avoidance; Fish behavior; Fisheries acoustics; Small pelagic assessment; Fish school; Boat noise.
Ano: 2019 URL: https://archimer.ifremer.fr/doc/00487/59906/63102.pdf
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Fine-scale vertical structure of sound-scattering layers over an east border upwelling system and its relationship to pelagic habitat characteristics ArchiMer
Diogoul, Ndague; Brehmer, Patrice; Perrot, Yannick; Tiedemann, Maik; Abou Thiam,; El Ayoubi, Salaheddine; Mouget, Anne; Migayrou, Chloe; Sadio, Oumar; Sarre, Abdoulaye.
Understanding the relationship between sound-scattering layers (SSLs) and pelagic habitat characteristics is a substantial step to apprehend ecosystem dynamics SSLs are detected on echo sounders representing aggregated marine pelagic organisms. In this study, SSL characteristics of zooplankton and micronekton were identified during an upwelling event in two contrasting areas of the Senegalese continental shelf. Here a cold upwelling-influenced inshore area was sharply separated by a strong thermal boundary from a deeper, warmer, stratified offshore area. Mean SSL thickness and SSL vertical depth increased with the shelf depth. The thickest and deepest SSLs were observed in the offshore part of the shelf. Hence, zooplankton and micronekton seem to occur...
Tipo: Text
Ano: 2020 URL: https://archimer.ifremer.fr/doc/00606/71777/70261.pdf
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Field investigations and multi-indicators for shallow water lagoon management: perspective for societal benefit ArchiMer
Brehmer, Patrice; Thang Do Chi,; Laugier, Thierry; Galgani, Francois; Laloe, Francis; Darnaude, Audrey M.; Fiandrino, Annie; Mouillot, David.
1. Abiotic and biotic variables of coastal lagoons are highly heterogeneous in both space and time, and this heterogeneity complicates the assessment of their ecological status. These variables are essential to the monitoring and preservation of these fragile ecotones and the resources and services they sustain. 2. An integrative approach for evaluating the ecological status of coastal lagoons, based on field investigations of the key parameters driving their functioning and a set of selected ecological indicators matching lagoon management information needs for societal benefits, is investigated. Consistency in lagoon status evaluation from multiple and different variables was estimated, through a case study comparing three adjacent yet contrasting French...
Tipo: Text Palavras-chave: Coastal lagoon; Ecological assessment; Ecotoxicology; Eutrophication; Indicator; Management; Mediterranean Sea; Observatory.
Ano: 2011 URL: http://archimer.ifremer.fr/doc/00056/16702/14202.pdf
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Eastern Tropical Atlantic Mixed Layer Depth: Assessment of Methods from In Situ Profiles in the Gulf of Guinea from Coastal to High Sea ArchiMer
N’guessan, Benjamin Kouadio; Kouassi, Aka Marcel; Trokourey, Albert; Toualy, Elisée; Kanga, Desiré Kouamé; Brehmer, Patrice.
To assess the eastern Atlantic tropical mixed layer depth (MLD) at 4°W in the Gulf of Guinea, water temperature and density profiles from over five hundred historical observational Conductivity – Temperature - Depth (CTD) data were used. These data, obtained from key oceanographic survey databases covering 60 years (1956 to 2016) were used for a numerical and visual determination of the MLD. The numerical approach consists of the use of the algorithms of three methods; while the visual estimation of the MLD were made on both temperature and density profiles. The numerical approaches were evaluated by comparing their results on the determination of tropical MLD with those of the visual inspections by means of statistical and graphical analysis in order to...
Tipo: Text Palavras-chave: Mixed layer depth; Gulf of Guinea; Atlantic Ocean; Density; Temperature.
Ano: 2020 URL: https://archimer.ifremer.fr/doc/00599/71115/75615.pdf
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Spawning energetics and otolith microchemistry provide insights into the stock structure of bonga shad Ethmalosa fimbriata ArchiMer
Doering, Julian; Wagner, Carola; Tiedemann, Maik; Brehmer, Patrice; Ekau, Werner.
The gross energy content of spawning batches and the microchemistry of sagittal otoliths in individual female bonga shad Ethmalosa fimbriata were compared between contrasting sampling sites at the Senegalese southern coast and inside the hypersaline Sine Saloum Estuary. Results show that females spawning in the estuary's middle reaches invested almost three times more energy into reproduction (115 +/- 65 J g(-1) body mass) than their neritic counterparts (39 +/- 34 J g(-1) body mass). Also, female otolith levels of Ba:Ca, Sr:Ca and Zn:Ca either differed significantly between study sites or could be linked to heterogeneous environmental variables. A quadratic discriminant function analysis provided evidence of segregated spawning populations of E. fimbriata...
Tipo: Text Palavras-chave: Clupeidae; Inverse estuary; Oocyte; Reproductive investment; Senegal; Stock discrimination; Spawning components.
Ano: 2019 URL: https://archimer.ifremer.fr/doc/00484/59567/62545.pdf
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Three dimensional characteristics of young-of-year pelagic fish schools in lake ArchiMer
Guillard, Jean; Brehmer, Patrice; Colon, Michel; Guennegan, Yvon.
Fish schools are aggregative structures encountered in all types of aquatic environments but have as yet been little studied in freshwaters except at small spatial scales. This study represents the three dimensional description of juvenile fish schools (Perca fluviatilis and Rutilus rutilus) in a lake environment using high resolution multibeam sonar system operating at a frequency of 455 kHz, composed of 60 beams of 1.5 degrees allowing a 90 degrees observation plane. The in situ diurnal schooling behaviour of young-of-the-year fish of both species is confirmed. The morphological, energetic and spatial variables of these schools are described and related to one another. The structures described are of the same order of magnitude as those described in the...
Tipo: Text Palavras-chave: Annecy Lake; Rutilus rutilus; Perca fluviatilis; Sonar; 3 D structure; Shoaling behaviour.
Ano: 2006 URL: http://archimer.ifremer.fr/doc/2006/publication-1661.pdf
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The potential impact of marine protected areas on the Senegalese sardinella fishery ArchiMer
Ba, Aliou; Chaboud, Christian; Schmidt, Joern; Diouf, Malick; Fall, Massal; Deme, Moustapha; Brehmer, Patrice.
In the early 2000s, Senegal set up several Marine Protected Areas (MPAs) along its coastal zone with the purpose of biodiversity conservation and to support sustainable management of fisheries. However, the impact of MPAs may vary according to the type of fisheries. In Senegal, the sardinella fishery accounts for 70% of total catches. This fishery is of crucial importance for national food security and employment. Given this importance, it is necessary to evaluate the impact of MPAs, often being considered as a tool for fisheries management. An analytical, dynamic and spatial bio-economic model of sardinella fishery, considering fish and fisher migration, has been developed and scenarios over forty years have been analyzed. The results show that the...
Tipo: Text Palavras-chave: Small scale fisheries; MPA; Bioeconomic modeling; Fishing capacity; Fishery management; Sardinella aurita; Sardinella maderensis; Aichi targets; West Africa.
Ano: 2019 URL: https://archimer.ifremer.fr/doc/00605/71672/73087.pdf
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