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Comparative genomics of closely related Thermococcus isolates, a genus of hyperthermophilic Archaea ArchiMer
Courtine, Damien.
The immense genomic diversity of microorganisms allows them to live everywhere, even in extreme environments such as deep hydrothermal vents. Scattered over the seabed, these are a good model for studying the biogeography and genomes diversification. A comparative genomics approach has been used on closely related isolates, of the genus Thermococcus. This work aimed at identifying mechanisms that have a role in the diversification of these genomes, and also to identify genes involved in this differentiation. For this purpose, two groups of about 20 isolates with different geographical origins were selected and sequenced.The geographical isolation resulting from colonization of new hydrothermal systems is likely to be a diversification and speciation factor...
Tipo: Text Palavras-chave: Génomique comparative; Thermococcus; Diversification; Génome; Hyperthermophile; Comparative!genomics; Thermococcus; Diversification; Genome; Hyperthermophile.
Ano: 2017 URL: https://archimer.ifremer.fr/doc/00609/72141/70893.pdf
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Thermococcus piezophilus sp. nov., a novel hyperthermophilic and piezophilic archaeon with a broad pressure range for growth, isolated from a deepest hydrothermal vent at the Mid-Cayman Rise ArchiMer
Dalmasso, Cecile; Oger, Philippe; Selva, Gwendoline; Courtine, Damien; L'Haridon, Stephane; Garlaschelli, Alexandre; Roussel, Erwan; Miyazaki, Junichi; Reveillaud, Julie; Jebbar, Mohamed; Takai, Ken; Maignien, Lois; Alain, Karine.
A novel strictly anaerobic, hyperthermophilic archaeon, designated strain CDGST, was isolated from a deep-sea hydrothermal vent in the Cayman Trough at 4964 m water depth. The novel isolate is obligate anaerobe and grows chemoorganoheterotrophically with stimulation of growth by sulphur containing compounds. Its growth is optimal at 75 °C, pH 6.0 and under a pressure of 50 MPa. It possesses the broadest hydrostatic pressure range for growth that has ever been described for a microorganism. Its genomic DNA G + C content is 51.11 mol%. The novel isolate belongs to the genus Thermococcus. Phylogenetic analyses indicated that it is most closely related to Thermococcus barossii DSM17882T based on its 16S rRNA gene sequence, and to ‘Thermococcus onnurineus’ NA1...
Tipo: Text Palavras-chave: Thermococcus; Piezophile; Hydrothermal vent; Cayman Trough.
Ano: 2016 URL: http://archimer.ifremer.fr/doc/00348/45949/45655.pdf
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Complete Genome Sequence of Hyperthermophilic Archaeon Thermococcus sp. EXT12c, Isolated from the East Pacific Rise 9°N ArchiMer
Courtine, Damien; Alain, Karine; Georges, Myriam; Bienvenu, Nadège; Morrison, Hilary G.; Eren, A. Murat; Maignien, Lois.
We report the genome sequence of Thermococcus sp. EXT12c isolated from a deep-sea hydrothermal vent at the East Pacific Rise 9°N. Microbes in the genus Thermococcus are able to grow anaerobically at high temperature, around neutral pH, and some of them under high hydrostatic pressure.
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Ano: 2017 URL: https://archimer.ifremer.fr/doc/00415/52652/53509.pdf
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Complete Genome Sequence of the Hyperthermophilic and Piezophilic Archeon Thermococcus piezophilus CDGS T , Able To Grow under Extreme Hydrostatic Pressures ArchiMer
Dalmasso, Cécile; Oger, Philippe; Courtine, Damien; Georges, Myriam; Takai, Ken; Maignien, Lois; Alain, Karine.
We report the genome sequence of Thermococcus superprofundus strain CDGST, a new piezophilic and hyperthermophilic member of the order Thermococcales isolated from the world’s deepest hydrothermal vents, at the Mid-Cayman Rise. The genome is consistent with a heterotrophic, anaerobic, and piezophilic lifestyle.
Tipo: Text
Ano: 2016 URL: https://archimer.ifremer.fr/doc/00345/45616/45237.pdf
Registros recuperados: 4
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