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Taking shortcuts with OWL using safe macros 17
Christopher J. Mungall; Alan Ruttenberg; David Osumi-Sutherland.
Accurate representation of complex domains such as biology demands powerful and expressive ontology languages such as OWL. However, the complex nested class expressions required for modeling can be a hindrance to ontology authoring and adoption. These class expressions can appear opaque to domain experts, and even users proficient in OWL can benefit from some kind of syntactic sugar or "short-cut" strategy, especially when authoring large ontologies.

One solution is to have domain experts fill in simple templates (for example, in Excel) and translate the results into more complex axioms, but this has the disadvantage of being disconnected from full ontology authoring and reasoning...
Tipo: Manuscript Palavras-chave: Bioinformatics.
Ano: 2011 URL: http://precedings.nature.com/documents/5292/version/2
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Modularization for the Cell Ontology 17
Christopher J. Mungall; Melissa A. Haendel; Amelia Ireland; Shahid Manzoor; Terry Meehan; David Osumi-Sutherland; Carlo Torniai; Alexander D. Diehl.
One of the premises of the OBO Foundry is that development of an orthogonal set of ontologies will increase domain expert contributions and logical interoperability, and decrease maintenance workload. For these reasons, the Cell Ontology (CL) is being re-engineered. This process requires the extraction of sub-modules from existing OBO ontologies, which presents a number of practical engineering challenges. These extracted modules may be intended to cover a narrow or a broad set of species. In addition, applications and resources that make use of the Cell Ontology have particular modularization requirements, such as the ability to extract custom subsets or unions of the Cell Ontology with other OBO ontologies. These extracted modules may be intended to...
Tipo: Manuscript Palavras-chave: Bioinformatics; Data Standards.
Ano: 2011 URL: http://precedings.nature.com/documents/6685/version/1
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Imprime registro no formato completo
Taking shortcuts with OWL using safe macros 17
Christopher J. Mungall; Alan Ruttenberg; David Osumi-Sutherland.
Accurate representation of complex domains such as biology demands
powerful and expressive ontology languages such as OWL. However, the
complex nested class expressions required for modeling can be a
hindrance to ontology authoring and adoption. These class expressions
can appear opaque to domain experts, and even users proficient in OWL
can benefit from some kind of syntactic sugar or "short-cut"
strategy, especially when authoring large ontologies.

One solution is to have domain experts fill in simple templates (for
example, in Excel) and translate the results into more complex...
Tipo: Manuscript Palavras-chave: Bioinformatics.
Ano: 2010 URL: http://precedings.nature.com/documents/5292/version/1
Registros recuperados: 3
Primeira ... 1 ... Última
 

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