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LTR-Retrotransposons in R. exoculata and Other Crustaceans: The Outstanding Success of GalEa-Like Copia Elements ArchiMer
Piednoel, Mathieu; Donnart, Tifenn; Esnault, Caroline; Graca, Paula; Higuet, Dominique; Bonnivard, Eric.
Transposable elements are major constituents of eukaryote genomes and have a great impact on genome structure and stability. They can contribute to the genetic diversity and evolution of organisms. Knowledge of their distribution among several genomes is an essential condition to study their dynamics and to better understand their role in species evolution. LTR-retrotransposons have been reported in many diverse eukaryote species, describing a ubiquitous distribution. Given their abundance, diversity and their extended ranges in C-values, environment and life styles, crustaceans are a great taxon to investigate the genomic component of adaptation and its possible relationships with TEs. However, crustaceans have been greatly underrepresented in...
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Ano: 2013 URL: http://archimer.ifremer.fr/doc/00185/29656/28030.pdf
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Multiple independent chromosomal fusions accompanied the radiation of the Antarctic teleost genus Trematomus (Notothenioidei:Nototheniidae) ArchiMer
Auvinet, Juliette; Graça, Paula; Dettai, Agnès; Amores, Angel; Postlethwait, John H.; Detrich, H. William; Ozouf-costaz, Catherine; Coriton, Olivier; Higuet, Dominique.
Background Chromosomal rearrangements are thought to be an important driving force underlying lineage diversification, but their link to speciation continues to be debated. Antarctic teleost fish of the family Nototheniidae (Notothenioidei) diversified in a changing environmental context, which led to ecological, morphological, and genetic differentiation among populations. In addition, extensive chromosomal repatterning accompanied species divergence in several clades. The most striking karyotypic changes involved the recent species radiation (about 10 My) of the genus Trematomus, with chromosomal pair numbers ranging between 29 and 12. These dramatic reductions in chromosome number resulted mostly from large-scale chromosome fusions. Multiple centric...
Tipo: Text Palavras-chave: BAC-FISH; Chromosomal painting; Chromosomal rearrangements; Chromosomal structural units; Chromosomal synteny; Nototheniidae; Speciation.
Ano: 2020 URL: https://archimer.ifremer.fr/doc/00615/72731/71831.pdf
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