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Registros recuperados: 77
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An individual Based Model of anchovy early life stages in the Bay of Biscay: validation of vertical distribution and growth ArchiMer
Huret, Martin; Petitgas, Pierre; Bourriau, Paul; Grellier, Patrick.
The objective of the study is a better understanding of recruitment variability in anchovy population. An Individual Based Model (IBM) is being developed for the full life cycle of anchovy. The early life stages are presented on this poster. The model is tested in a 1D-vertical framework for validation of the vertical distribution of modelled eggs and larvae against in-situ data. The dynamic Energy Budget (DEB) theory is the biological baseline for individual growth. We test its ability to simulate the observed growth curves between years with contrasted temperatures.
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Ano: 2011 URL: http://archimer.ifremer.fr/doc/00054/16508/14022.pdf
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Effects of spawning patterns and larval mortality on survival to the juvenile stage : a modelling analysis on the anchovy population of the Bay of Biscay ArchiMer
Huret, Martin; Petitgas, Pierre; Struski, Caroline.
Fish populations show complex life cycles with successive dependent life stages, the spatio-temporal patterns of distribution at one stage impacting distribution, growth and mortality during the next stage. Here we propose to assess the relative effect of spawning (timing, duration, fecundity and spatial distribution, resulting from adult environmental conditions over autumn and winter) and larval mortality on the resulting survival at the age of metamorphosis. We used a suite of models run sequentially : a coupled physical-biogeochemical model to provide the environmental forcing, a Dynamic Energy Budget (DEB) model for adult fish growth and reproduction (spawning timing, duration and fecundity), an Individual Based Model (IBM) for larval drift, growth...
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Ano: 2010 URL: http://archimer.ifremer.fr/doc/00023/13451/10464.pdf
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Biophysical modelling to investigate the effects of climate change on marine population dispersal and connectivity ArchiMer
Lett, Christophe; Ayata, Sakina-dorothee; Huret, Martin; Irisson, Jean-olivier.
Climate may act on the dispersal and connectivity of marine populations through changes in the oceanic circulation and temperature, and by modifying species' prey and predator distributions. As dispersal and connectivity remain difficult to assess in situ, a first step in studying the effects of climate change can be achieved using biophysical models. To date, only a few biophysical models have been used for this purpose. Here we review these studies and also include results from other recent modelling efforts. We show that increased sea temperature, a major change expected under climate warming, may impact dispersal and connectivity patterns via changes in reproductive phenology (e.g., shift in the spawning season), transport (e.g., reduced pelagic larval...
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Ano: 2010 URL: http://archimer.ifremer.fr/doc/00031/14176/11522.pdf
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Rapport de la campagne à la mer PELGAS2012 ArchiMer
Doray, Mathieu; Masse, Jacques; Huret, Martin; Doremus, Ghislain; Duhamel, Erwan.
PELGAS2012 sea cruise summary, including a multi-sensor characterisation of the marine particles in the Gironde mouth
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Ano: 2012 URL: http://archimer.ifremer.fr/doc/00127/23832/21756.pdf
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Anchovy population expansion in the North Sea ArchiMer
Petitgas, Pierre; Alheit, Juergen; Peck, Myron A.; Raab, Kristina; Irigoien, Xabier; Huret, Martin; Van Der Kooij, Jeroen; Pohlmann, Thomas; Wagner, Carola; Zarraonaindia, Iratxe; Dickey-collas, Mark.
The abundance and spatial occupation of European anchovy Engraulis encrasicolus have increased in the North Sea since the mid-1990s. We use a cross-disciplinary approach combining genetics, transport modelling, survey time series analyses and physical oceanographic modelling to investigate 3 hypotheses on the reasons for this change. Evidence from connectivity studies suggests that the population of North Sea anchovy is separate from that in the Bay of Biscay. The recruitment pulses observed in survey data fit a life cycle which includes spawning in early summer and larval development in late summer. This also supports the concept of population expansion originating from local remnant population(s). In terms of growth physiology, suitable thermal windows...
Tipo: Text Palavras-chave: Climate variability; Small pelagic fish; Regime shift; Temperature; Anchovy; North Sea.
Ano: 2012 URL: http://archimer.ifremer.fr/doc/00060/17140/14638.pdf
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Data products for fish stocks and ecosystem assessment:the PELGAS survey example ArchiMer
Doray, Mathieu; Petitgas, Pierre; Romagnan, Jean-baptiste; Huret, Martin; Duhamel, Erwan; Dupuy, Christine; Spitz, Jérôme; Berger, Laurent; Dorémus, Ghislain; Bourriau, Paul; Grellier, Patrick; Massé, Jacques; Sanchez, Florence.
The initial objective of the PELGAS integrated survey was to assess the biomass of small pelagic fish in the Bay of Biscay in spring. Sampling has been extended to study the spatial structure and dynamics of the pelagic ecosystem in springtime. The PELGAS survey has produced since 2000 long-term time-series of spatially-explicit data and indices, describing the main pelagic ecosystem components: hydrology, phytoplankton, mesozooplankton, fish and megafauna. In addition to small pelagic fish biomass estimates used for fish stock assessment, the survey now delivers two types of ecosystem products: standard gridded maps of ecosystem parameters, and a time series dataset of indicators of the Bay of Biscay pelagic ecosystem state. The evolution of the PELGAS...
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Ano: 2018 URL: http://archimer.ifremer.fr/doc/00457/56844/58693.pdf
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A 37 years hindcast of a coupled physical-biogeochemical model and its use for fisheries oceanography in the Bay of Biscay ArchiMer
Huret, Martin; Petitgas, Pierre; Struski, Caroline; Leger, Fabien; Sourisseau, Marc; Lazure, Pascal.
Overexploitation and climate change are increasingly causing unanticipated changes in marine ecosystems, such as higher variability in fish recruitment and shifts in species distribution, pressing for developing fisheries oceanography. In the meantime, operational oceanography rapidly progresses and its products become easy to access to a large community, among them fisheries scientists. Multiyear oceanographic reanalyses (hindcasts) were identified has a priority product by the ICES WG on Operational Oceanographic Products for Fisheries and Environment (WGOOFE). We performed a 37 years hindcast (1972-2008) run with a coupled physical-biogeochemical model (ECO-MARS3D) over the Bay of Biscay, using realistic meteorological and run-off forcing. We first...
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Ano: 2010 URL: http://archimer.ifremer.fr/doc/00023/13432/10442.pdf
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A behavioural fish movement approach within an anchovy IBM model to study fish migration patterns in the Bay of Biscay ArchiMer
Politikos, Dimitrios; Huret, Martin; Petitgas, Pierre.
Modelling of fish movement behaviour within a heterogeneous marine environment is a challenging but also key issue for understanding the effect of environmental factors and climatic change on fish processes (growth, distribution, mortality, reproduction). Fish movement models have the capability to encompass the combined effect of environment and empirical knowledge of fish individuals as energy requirements, known preys and predators, swimming capacities into a unified framework. Following an Individual Based Model (IBM) approach, a fish movement model has been developed to simulate the active movement of adult anchovy in the Bay of Biscay (BoB) in response to the spatio-temporal variations of both biotic and abiotic factors, as well as its internal...
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Ano: 2013 URL: http://archimer.ifremer.fr/doc/00176/28709/27161.pdf
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Apports des données de la 'couleur de l'eau' à la modélisation couplée physique-biogéochimie en milieu dynamique côtier : Application au Rio de la Plata et au Golfe de Gascogne ArchiMer
Huret, Martin.
Continental margins play a crucial role in biogeochemical fluxes between the continents and the open ocean. They are also highly sensitive to human perturbations. Primary production is highly dependent on the complex dynamics of these coastal zones, and on the river supply in nutrients, as well as in Suspended Particulate Matter (SPM) which limit light availability. The quantification of the production is a prerequisite in many applications, from the understanding of the role of the coastal ocean in climate change, to eutrophication and fisheries resources issues within the frame of the integrated management of the coastal zone. Coupled physical-biogeochemical models are useful in studying and monitoring primary production. Because of the numerous complex...
Tipo: Text Palavras-chave: Parameter estimation; Data assimilation; Suspended Particulate Matter (SPM); Chlorophyll a; Phytoplankton blooms; Physical biogeochemical coupled model; Ocean color; Satellite data; Coastal area; Bay of Biscay; Rio de la Plata; Estimation de paramètres; Assimilation de données; Matières En Suspension (MES); Chlorophylle a; Blooms phytoplanctoniques; Modèle couplé physique biogéochimie; Couleur de l'eau; Donnée satellitale; Milieu côtier; Golfe de Gascogne; Rio de la Plata.
Ano: 2005 URL: http://archimer.ifremer.fr/doc/2005/these-337.pdf
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Determinism of Temporal Variability in Size at Maturation of Sardine Sardina pilchardus in the Bay of Biscay ArchiMer
Véron, Matthieu; Duhamel, Erwan; Bertignac, Michel; Pawlowski, Lionel; Huret, Martin; Baulier, Loic.
Age and size at maturation appear as key parameters governing the dynamics of a population as they affect growth rate, fecundity, and survival. The expression of such life history traits is determined by genetic make-up and modulated by environmental factors mainly through phenotypic plasticity. Moreover, fishing, besides decreasing population size and changing demographic composition can alter allelic frequencies through fisheries-induced evolution by selecting for some particular traits. In the Bay of Biscay, a decreasing trend in both sardine body condition and size-at-age has recently been pointed out at the population level. The Probabilistic Maturation Reaction Norm (PMRN) approach was applied to help disentangle phenotypic plasticity and genetic...
Tipo: Text Palavras-chave: Fisheries-induced evolution; Body condition; Phenotypic plasticity; Maturation; Growth; Sardina pilchardus; Bay of biscay.
Ano: 2020 URL: https://archimer.ifremer.fr/doc/00660/77203/78637.pdf
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Bioenergetic condition of anchovy and sardine in the Bay of Biscay and English Channel ArchiMer
Gatti, Paul; Cominassi, Louise; Duhamel, Erwan; Grellier, Patrick; Le Delliou, Herve; Le Mestre, Sophie; Petitgas, Pierre; Rabiller, Manuella; Spitz, Jerome; Huret, Martin.
There is a growing interest in monitoring body condition of marine organisms in the context of the ecosystem approach to fisheries and global change. Fish condition is under the influence of environmental variability on seasonal scale, but also on longer timescales. It represents a good indicator of habitat quality or individual fitness, and is also a relevant parameter to evaluate energy transfer through the trophic chain. However, the sources of variability in fish condition need to be accurately understood and the significance of existing indices has to be correctly assessed. Here, we measured the energy density, a precise and global indicator of fish bioenergetic condition, for anchovy (Engraulis encrasicolus) and sardine (Sardina pilchardus) in the...
Tipo: Text Palavras-chave: Energy density; Calorimetry; Small pelagic fish; Engraulis encrasicolus; Sardina pilchardus; Northeast Atlantic.
Ano: 2018 URL: https://archimer.ifremer.fr/doc/00416/52754/53615.pdf
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Integrating Biogeochemistry and Ecology Into Ocean Data Assimilation Systems ArchiMer
Brasseur, Pierre; Gruber, Nicolas; Barciela, Rosa; Brander, Keith; Doron, Maeva; El Moussaoui, Abdelali; Hobday, Alistair J.; Huret, Martin; Kremeur, Anne-sophie; Lehodey, Patrik; Matear, Richard; Moulin, Cyril; Murtugudde, Raghu; Senina, Inna; Svendsen, Einar.
Monitoring and predicting the biogeochemical state of the ocean and marine ecosystems is an important application of operational oceanography that needs to be expanded. The accurate depiction of the ocean's physical environment enabled by Global Ocean Data Assimilation Experiment (GODAE) systems, in both real-time and reanalysis modes, is already valuable for various for various applications, such as the fishing industry and fisheries management. However, most of these applications require accurate estimates of both physical and biogeochemical ocean conditions over a wide range of spatial and temporal scales. In this paper, we discuss recent developments that enable coupling new biogeochemical models and assimilation components with the existing GODAE...
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Ano: 2009 URL: http://archimer.ifremer.fr/doc/2009/publication-6806.pdf
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Populations ichtyologiques de petits pélagiques. Sous-région marine Golfe de Gascogne. Evaluation initiale DCSMM. ArchiMer
Petitgas, Pierre; Massé, Jacques; Huret, Martin; Doray, Mathieu; Duhamel, Erwan.
Tipo: Text Palavras-chave: Golfe de Gascogne; Petits pélagiques; Espèces; Biocénose; Etat des stocks.
Ano: 2012 URL: https://archimer.ifremer.fr/doc/00329/44028/43600.pdf
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Vers un développement durable de la pêche française ? Perspectives du scénario d’agriculture durable Afterres2050 ArchiMer
Doray, Mathieu; Huret, Martin; Couturier, Christian; Doublet, Sylvain.
L'objectif des Nation Unies pour le développement durable de l’Océan (ODD14) peut il se décliner dans le secteur de la pêche en France ? Et si oui comment ? La principale fonction de la pêche (et de l’aquaculture) françaises étant la fourniture de produits de la mer à des fins alimentaires, nous replaçons la pêche (et de l’aquaculture) françaises dans le contexte plus large de l’approvisionnement alimentaire du pays. Nous présentons le scénario prospectif Afterres2050, qui propose une trajectoire vers un approvisionnement alimentaire durable pour le France (et quelques voisins) en 2050. Afterres2050 est un scénario technique qui vise à satisfaire nos besoins, en alimentation, en énergie, et en matériaux à l’horizon 2050, dans le respect des écosystèmes,...
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Ano: 2019 URL: https://archimer.ifremer.fr/doc/00512/62325/66583.pdf
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A multi-decadal hindcast of a physical–biogeochemical model and derived oceanographic indices in the Bay of Biscay ArchiMer
Huret, Martin; Sourisseau, Marc; Petitgas, Pierre; Struski, Caroline; Leger, Fabien; Lazure, Pascal.
Multiple year oceanographic simulations (hindcast) are identified as a priority oceanography product for fisheries and environment studies since they provide a unique continuous long-term dataset allowing integrated assessment of the ocean state and evolution. We performed a 37 year (1972–2008) hindcast run with a coupled physical–biogeochemical model in the Bay of Biscay. The coupled model and the hindcast configuration are described. A model skill assessment is performed with a large set of in-situ data. Average seasonal currents show major circulation patterns over the shelf. Among tracers, temperature and salinity have the best agreement, ahead of nitrates and silicates, chlorophyll, and finally phosphates and ammonium. For chlorophyll, improved...
Tipo: Text Palavras-chave: Physical-biogeochemical model; Hindcast; Skill assessment; Environmental indices; Seasonal pattern; Interannual variability; Fisheries oceanography; Bay of Biscay.
Ano: 2013 URL: http://archimer.ifremer.fr/doc/00114/22538/20237.pdf
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Direct assessment of small pelagic fish by the PELGAS13 acoustic survey ArchiMer
Duhamel, Erwan; Doray, Mathieu; Huret, Martin; Doremus, Ghislain; Pengrech, Alexis.
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Ano: 2013 URL: http://archimer.ifremer.fr/doc/00157/26825/24937.pdf
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Coccolith-derived turbidity and hydrological conditions in May in the Bay of Biscay ArchiMer
Perrot, Laurie; Gohin, Francis; Ruiz-pino, Diana; Lampert, Luis; Huret, Martin; Dessier, Aurelie; Malestroit, Pascale; Dupuy, Christine; Bourriau, Paul.
Coccolithophore blooms occur regularly from April to June in the Bay of Biscay where they have been observed for many years from ocean-colour imagery thanks to the ability of their calcite plates to scatter light. They are easily depicted on interpolated images of non-algal Suspended Particulate Matter (SPM) derived from satellite reflectance data in May, at the time of the PELGAS (PELagique GAScogne) annual surveys. Over the springs 2012 to 2015, the PELGAS surveys provided in-situ data on the turbidity throughout the water column and on the hydrological environment prevailing during the blooms in the vicinity of the continental shelf break. The satellite-derived SPM in the area of coccolithophore blooms was closely related to measured turbidity in the...
Tipo: Text Palavras-chave: Bay of Biscay; Ocean colour; Suspended particulate matter; Turbidity; Coccoliths; Stratification.
Ano: 2018 URL: https://archimer.ifremer.fr/doc/00416/52790/53689.pdf
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Contribution of a bioenergetics model to investigate the growth and survival of European seabass in the Bay of Biscay – English Channel area ArchiMer
Dambrine, Chloe; Huret, Martin; Woillez, Mathieu; Pecquerie, Laure; Allal, Francois; Servili, Arianna; De Pontual, Helene.
The European seabass (Dicentrarchus labrax) is a species of particular ecological and economic importance. Stock assessments have recently revealed the worrying state of the “Northern stock”, probably due to overfishing and a series of poor recruitments. The extent to which these poor recruitments are due to environmental variability is difficult to assess, as the processes driving the seabass life cycle are poorly known. Here we investigate how food availability and temperature may affect the growth and survival of wild seabass at the individual scale. To this end, we developed a bioenergetics model based on the Dynamic Energy Budget (DEB) theory. We applied it to seabass population of the Northeast Atlantic region (Bay of Biscay – English Channel area)...
Tipo: Text Palavras-chave: Dicentrarchus labrax Northeast Atlantic Dynamic Energy Budget theory Growth; Starvation Early-life stages.
Ano: 2020 URL: https://archimer.ifremer.fr/doc/00612/72397/71341.pdf
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Impacts of climate change on the complex life cycles of fish ArchiMer
Petitgas, Pierre; Rijnsdorp, Adriaan D.; Dickey-collas, Mark; Engelhard, Georg H.; Peck, Myron A.; Pinnegar, John; Drinkwater, Kenneth F.; Huret, Martin; Nash, Richard.
To anticipate the response of fish populations to climate change, we developed a framework that integrates requirements in all life stages to assess impacts across the entire life cycle. The framework was applied on plaice (Pleuronectes platessa) and Atlantic herring (Clupea harengus) in the North Sea, Atlantic cod (Gadus morhua) in the Norwegian/Barents Seas and European anchovy (Engraulis encrasicolus) in the Bay of Biscay. In each case study, we reviewed habitats required by each life stage, habitat availability, and connectivity between habitats. We then explored how these could be altered by climate change. We documented environmental processes impacting habitat availability and connectivity, providing an integrated view at the population level and in...
Tipo: Text Palavras-chave: Connectivity; Habitat; Eco-physiology; Anchovy; Herring; Plaice; Cod.
Ano: 2013 URL: http://archimer.ifremer.fr/doc/00118/22935/20798.pdf
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Direct assessment of small pelagic fish by the PELGAS16 acoustic survey ArchiMer
Duhamel, Erwan; Doray, Mathieu; Huret, Martin; Sanchez, Florence; Lespagnol, Patrick; Doremus, Ghislain; Lemerre, Charlotte.
The Pelgas16 acoustic survey has been carried out with very good weather conditions (regular low wind, medium temperatures) for the whole area, from the South of the bay of Biscay to the west of Brittany. The help of commercial vessels (two pairs of pelagic trawlers and a single one) during 18 days provided about 120 valid identification hauls instead of about 60 before 2007 when Thalassa was alone to identify echotraces. Their participation increased the precision of identification of echoes and some double hauls permitted to confirm that results provided by the two types of vessels (R/V and Fishing boats) were comparable and usable for biomass estimate purposes. These commercial vessels participated to the PELGAS survey in a very good spirit of...
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Ano: 2016 URL: http://archimer.ifremer.fr/doc/00344/45546/45157.pdf
Registros recuperados: 77
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