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Two decades of Pseudo-nitzschia spp. blooms and king scallop (Pecten maximus) contamination by domoic acid along the French Atlantic and English Channel coasts: Seasonal dynamics, spatial heterogeneity and interannual variability ArchiMer
Husson, Berengere; Hernandez Farinas, Tania; Le Gendre, Romain; Schapira, Mathilde; Chapelle, Annie.
King scallop contamination (Pecten maximus) by domoic acid, a neurotoxin produced by some species of the diatom Pseudo-nitzschia, is highly problematic because of its lengthy retention in the bivalve tissue, leading to prolonged fishery closures. Data collected within the French Phytoplankton and Phycotoxin monitoring network (REPHY) over the 1995–2012 period were used to characterize the seasonal dynamics and the interannual variability of P.-nitzschia spp. blooms as well as the contamination of king scallop fishing grounds, in six contrasted bays distributed along the French Atlantic coast and English Channel. Monitoring revealed that these toxic events have become more frequent since the year 2000, but with varying magnitudes, frequencies and timing...
Tipo: Text Palavras-chave: Pseudo-nitzschia spp.; Domoic acid; King scallop; Interannual variability; Seasonal dynamics; Environmental parameters.
Ano: 2016 URL: http://archimer.ifremer.fr/doc/00299/40983/40084.pdf
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Towards the Determination of Mytilus edulis Food Preferences Using the Dynamic Energy Budget (DEB) Theory ArchiMer
Picoche, Coralie; Le Gendre, Romain; Flye-sainte-marie, Jonathan; Francoise, Sylvaine; Maheux, Frank; Simon, Benjamin; Gangnery, Aline.
The blue mussel, Mytilus edulis, is a commercially important species, with production based on both fisheries and aquaculture. Dynamic Energy Budget (DEB) models have been extensively applied to study its energetics but such applications require a deep understanding of its nutrition, from filtration to assimilation. Being filter feeders, mussels show multiple responses to temporal fluctuations in their food and environment, raising questions that can be investigated by modeling. To provide a better insight into mussel–environment interactions, an experiment was conducted in one of the main French growing zones (Utah Beach, Normandy). Mussel growth was monitored monthly for 18 months, with a large number of environmental descriptors measured in parallel....
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Ano: 2014 URL: http://archimer.ifremer.fr/doc/00218/32895/31380.pdf
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Comment représenter les mouvements de la mer : introduction à l’hydrodynamique côtière et à sa modélisation ArchiMer
Le Gendre, Romain; Dumas, Franck; Lefevre, Jérôme; Loubersac, Lionel.
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Ano: 2016 URL: http://archimer.ifremer.fr/doc/00342/45332/44794.pdf
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NEREIS (Nutrient Export Role on Eutrophication. Indicators and model Scenarios) - Rapport Seine-Aval ArchiMer
Garnier, Josette; Le Gendre, Romain; Passy, Paul; Paris, Francois; Billen, Gilles; Callens, Julie; Cugier, Philippe; Tronquart, Olivier; Romero, Estela; Riou, Philippe.
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Ano: 2012 URL: http://archimer.ifremer.fr/doc/00092/20336/17982.pdf
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Eutrophication modelling chain for improved management strategies to prevent algal blooms in the Bay of Seine ArchiMer
Passy, Paul; Le Gendre, Romain; Garnier, Josette; Cugier, Philippe; Callens, Julie; Paris, Francois; Billen, Gilles; Riou, Philippe; Romero, Estela.
Eutrophication of the Seine estuary and the Bay of the Seine is a crucial environmental issue for the management of ecosystems and economic activities related to fisheries and tourism. A large quantity of nutrients, especially nitrogen, is brought to the coastal zone by the Seine River, the main input of that area, but also by smaller rivers along the Normandy coast. This large delivery of nitrogen leads to an imbalance between nitrogen (N), phosphorus (P) and silica (Si), which affects the growth of planktonic organisms and can exacerbate the occurrence of harmful algal blooms (HABs). These events can be damaging for shellfish fisheries, an important economic resource for the region. The study describes a new modelling chain coupling a riverine and a...
Tipo: Text Palavras-chave: Eutrophication; Harmful algal blooms; Nutrient load; Modelling; Water quality; Seine.
Ano: 2016 URL: http://archimer.ifremer.fr/doc/00300/41103/41542.pdf
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Carbon Dynamics Along the Seine River Network: Insight From a Coupled Estuarine/River Modeling Approach ArchiMer
Laruelle, Goulven G.; Marescaux, Audrey; Le Gendre, Romain; Garnier, Josette; Rabouille, Christophe; Thieu, Vincent.
The Seine river discharges over 700 Gg of carbon (C) every year into the sea mostly under the form of dissolved inorganic carbon (DIC) and emits 445 Gg under the form of carbon dioxide (CO2) to the atmosphere over its entire river network. The watershed, which drains 76,000 km2, is heavily populated with 18 106 inhabitants and is thus submitted to large anthropic pressure. The offline coupling of two Reactive Transport Models is used to understand the complex spatial and temporal dynamics of carbon, oxygen and nutrients and quantify the CO2 exchange at the air-water interface along the main axis of the river. The estuarine section of the Seine is simulated by the generic estuarine model C-GEM (for Carbon Generic Estuarine Model), while the upstream part of...
Tipo: Text Palavras-chave: Dissolved inorganic and organic carbon; Carbon dioxide; Reactive-transport model; Seine river and estuary; Biogeochemical budget.
Ano: 2019 URL: https://archimer.ifremer.fr/doc/00493/60421/63858.pdf
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AGIL/BN - Aide à la Gestion Intégrée du Littoral en Basse-Normandie - Bilan des travaux 2012 ArchiMer
Le Gendre, Romain; Riou, Philippe.
Dans le cadre d’une convention multi partenariale, le Laboratoire Environnement Ressources s’est vu confier la maîtrise d’ouvrage du projet « AGIL BN ». Son objectif est de développer des outils et compétences permettant d’élaborer des aides à la prise de décision en matière d’aménagement et de gestion de l’environnement littoral en Basse-Normandie. Il comprend 2 grands volets : - développement d’un Système d’Information Géographique « environnement littoral », avec mise en ligne d’un atlas électronique « état des lieux » accessible à tous à partir du site WEB de l’Ifremer ; - développement d’un réseau de modèles hydrodynamiques couvrant l’ensemble du littoral Bas- Normand, et permettant de réaliser des simulations d’impact de différents aménagements,...
Tipo: Text Palavras-chave: Littoral de Basse-Normandie; Environnement et aménagement littoral; Outils d’aide à la décision; SIG; Modèles hydrodynamiques.
Ano: 2013 URL: http://archimer.ifremer.fr/doc/00289/40013/38595.pdf
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Projet OGIVE. Outils d'aide à la Gestion et à la Valorisation des Ecosystèmes conchylicoles de Basse-Normandie. Rapport final de phase III (2011-2013) ArchiMer
Gangnery, Aline; Cugier, Philippe; Le Gendre, Romain; Legendre, Aurelie; Maheux, Frank; Mary, Charlotte; Normand, Julien; Parrad, Sophie; Pierre-duplessix, Olivier; Picoche, Coralie; Pien, Sebastien; Rabiller, Emilie; Simon, Benjamin.
L’objectif général du projet OGIVE est d’acquérir des connaissances sur le fonctionnement des écosystèmes conchylicoles de Basse-Normandie dans le but d’établir une plateforme de données communes à l’ensemble des partenaires du projet. Ces connaissances sont ensuite utilisées pour développer des outils permettant de fournir des avis et expertises aux gestionnaires du Domaine Public Maritime. Le projet a ainsi pour objectif de contribuer au développement durable de la filière conchylicole en Basse-Normandie en optimisant la production conchylicole et en préservant la qualité environnementale des écosystèmes qui supportent cette activité. Le projet OGIVE a été structuré initialement autour de trois actions : 1) Acquisition de données : cette action a le...
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Ano: 2015 URL: https://archimer.ifremer.fr/doc/00253/36468/35010.pdf
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Atlas 1995-2012 des bassins versants de Basse-Normandie ArchiMer
Picoche, Coralie; Paris, Francois; Le Gendre, Romain.
Ce rapport présente les différents bassins versants impactant la zone côtière bas-normande ainsi que les méthodes de reconstruction de leurs débits aux exutoires marins. Les données sources proviennent de mesures fournies par la banque Hydro (http://www.hydro.eaufrance.fr/). Les différentes méthodes de reconstruction du signal de débit ont été définies avec l’expertise d’Hubert Caplet de la DREAL Basse-Normandie.
Tipo: Text Palavras-chave: Bassins versants; Débits; Basse-Normandie.
Ano: 2013 URL: http://archimer.ifremer.fr/doc/00134/24548/22581.pdf
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Spatial Variability of Benthic-Pelagic Coupling in an Estuary Ecosystem: Consequences for Microphytobenthos Resuspension Phenomenon ArchiMer
Ubertini, Martin; Lefebvre, Sebastien; Gangnery, Aline; Grangere, Karine; Le Gendre, Romain; Orvain, Francis.
The high degree of physical factors in intertidal estuarine ecosystem increases material processing between benthic and pelagic compartments. In these ecosystems, microphytobenthos resuspension is a major phenomenon since its contribution to higher trophic levels can be highly significant. Understanding the sediment and associated microphytobenthos resuspension and its fate in the water column is indispensable for measuring the food available to benthic and pelagic food webs. To identify and hierarchize the physical/biological factors potentially involved in MPB resuspension, the entire intertidal area and surrounding water column of an estuarine ecosystem, the Bay des Veys, was sampled during ebb tide. A wide range of physical parameters (hydrodynamic...
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Ano: 2012 URL: http://archimer.ifremer.fr/doc/00090/20126/17775.pdf
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HLIN - Huîtres du Littoral Normand - Suivi de la colonisation et du recrutement des huîtres sauvages sur le littoral normand - Etat des travaux 2011-2013 ArchiMer
Pien, Sebastien; Maheux, Franck; Gauquelin, Thibaut; Le Gendre, Romain.
Sur plusieurs points du littoral français, les bancs sauvages d'huîtres creuses Crassostrea gigas se développent depuis une trentaine d'années. et cette colonisation a tendance à se développer vers le nord, conséquence probable du réchauffement climatique. Si la Normandie est encore très peu touchée par ce phénomène, il semble toutefois opportun de suivre l'évolution de cette colonisation dans les années à venir et apprécier les conséquences futures de cette colonisation sur l'économie ostréicole normande. Après une étude effectuée par l'intermédiaire d'un stage en 2010, la période 2011-2013 a permis de mettre en œuvre et d'améliorer les propositions de protocole émis lors des travaux de 2010. De plus, certains points particuliers, comme l'origine du...
Tipo: Text Palavras-chave: Huître; Colonisation; Hydrodynamisme; Crassotrea gigas; Espèce invasive.
Ano: 2013 URL: http://archimer.ifremer.fr/doc/00191/30258/28701.pdf
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Extension de l'atlas des apports hydriques 2011-2017 à l'échelle de la Grande Terre ArchiMer
Bourassin, Emmanuel; Bruyere, Oriane; Le Gendre, Romain; Soulard, Benoit.
Ce rapport fait partie du projet de recherche PRESENCE (PRESions sur les Ecosystèmes récifo-lagonaires de Nouvelle-CalédoniE). L’objectif général de ce projet est de mieux appréhender le fonctionnement des lagons de Nouvelle-Calédonie à partir d’observations in-situ, de télédétection et de modélisation. Une des tâches de PRESENCE consiste notamment à étudier via des modèles hydrodynamiques le devenir des apports terrigènes au sein des lagons, et cela à l’échelle de la Grande Terre. Ce rapport présente la méthodologie utilisée et les données produites pour compléter le travail effectué lors de la création de l’Atlas 2011-2017 des apports hydriques à l’échelle du territoire calédonien (Lalau et al., 2019). En effet, ce premier rapport ne présentant qu’un...
Tipo: Text Palavras-chave: Bassins versants; Nouvelle-Calédonie; Débits; Crues; Apports terrigènes; Grande Terre.
Ano: 2021 URL: https://archimer.ifremer.fr/doc/00678/78970/81374.pdf
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Tracking, understanding and predictingtoxic phytoplankton blooms and their effects scallops populations in the bay of Seine: the comanche projet ArchiMer
Schapira, Mathilde; Le Gendre, Romain; Fiant, Liliane; Fauchot, Juliette; Raimbault, René; Dreanno, Catherine; Claquin, Pascal; Riou, Philippe.
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Ano: 2011 URL: http://archimer.ifremer.fr/doc/00056/16721/14175.pdf
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Phytoplankton dynamics in the southern New Caledonian lagoon during a southeast trade winds event ArchiMer
Neveux, Jacques; Lefebvre, Jean-pierre; Le Gendre, Romain; Dupouy, Cecile; Gallois, Francis; Courties, Claude; Gerard, Philippe; Fernandez, Jean-michel; Ouillon, Sylvain.
During the Echolag cruise (13 February-8 March 2007), the effect of 16-30 knot trade winds on abundance, community structure and dynamics of phytoplankton was investigated in the southern part of the New Caledonian coral reefs and surrounding oceanic waters. In this area, the coral reefs form two horn-like structures (hereinafter referred to as 'horn reefs'), oriented south-east, and separated by a relatively deep valley. Three repeated samplings at one week intervals of a 32 station array showed that trade winds induce surface water cooling and significant enrichment of mid- and bottom waters above the reef shelf. This enrichment appeared as the result of a general rise of the oceanic thermocline and nitracline due to the combination of trade winds and...
Tipo: Text Palavras-chave: Chlorophyll; Phycoerythrin; Flow cytometry; Phytoplankton; In vivo fluorescence; Growth rate; Trade winds; Lagoon; Internal wave; New Caledonia.
Ano: 2010 URL: http://archimer.ifremer.fr/doc/00013/12437/9258.pdf
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Rapport de mesures sur l’atoll de Takaroa. Caractérisation du fonctionnement hydrodynamique de l’atoll ArchiMer
Le Gendre, Romain; Andrefouet, Serge; Dumas, Franck.
Ce document présente les données hydrodynamiques recueillies sur l’atoll de Takaroa dans le cadre du projet financé par le Fond Européen de Developpement (FED) et le Service de la Perliculture de la Polynésie française intitulé « Professionnalisation et pérennisation de la Perliculture – AP1 – Etude de l'hydroclimat et des sources de nourriture de l'huître perlière Pinctada margaritifera ».
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Ano: 2010 URL: http://archimer.ifremer.fr/doc/00092/20365/18027.pdf
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Modélisation environnementale de l'estuaire de la Seine ArchiMer
Bacq, Nicolas; Cugier, Philippe; Grasso, Florent; Le Gendre, Romain; Le Hir, Pierre; Lemoine, Jean-philippe; Riou, Philippe; Schulz, Elisabeth; Thouvenin, Benedicte; Verney, Romaric.
Dans le cadre du programme de recherche Seine-Aval 5, différentes stratégies de modélisation numérique sont mises en place pour aider à répondre aux questionnements scientifiques et sociétaux associés au fonctionnement physique, biologique, chimique et écologique de l'estuaire de la Seine (ex. projets RESET et HYMOSED). Les forçages météo-marins (vent, vague, marée) et hydrologique (débit) contrôlent le fonctionnement hydro-morpho-sédimentaire et biogéochimique de l'estuaire, modifiant ainsi les paramètres environnementaux de l’estuaire amont jusqu’à la baie de Seine (ex. nature des fonds, courant, turbidité, salinité, température, oxygène dissous, chlorophylle-a). La modélisation de ces paramètres, ainsi que leur évolution face à différents scénarios...
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Ano: 2015 URL: http://archimer.ifremer.fr/doc/00284/39480/37966.pdf
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Are sea surface temperature satellite measurements reliable proxies of lagoon temperature in the south pacific? ArchiMer
Van Wynsberge, Simon; Menkes, Christophe; Le Gendre, Romain; Passfield, Teuru; Andrefouet, Serge.
In remote coral reef environments, lagoon and reef in situ measurements of temperature are scarce. Sea Surface Temperature (SST) measured by satellite has been frequently used as a proxy of the lagoon temperature experienced by coral reef organisms (TL) especially during coral bleaching events. However, the link between SST and TL is poorly characterized. First, we compared the correlation between various SST series and TL from 2012 to 2016 in three atolls and one island in the Central South Pacific Ocean. Simple linear correlation between SST and TL ranged between 0.44 and 0.97 depending on lagoons, localities of sensors, and type of SST data. High-resolution-satellite-measurements of SST inside the lagoons did not outperform oceanic SST series,...
Tipo: Text Palavras-chave: Atoll lagoon; Pacific islands; Reef aperture; Climate change; Sea Surface Temperature.
Ano: 2017 URL: https://archimer.ifremer.fr/doc/00403/51491/52087.pdf
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Long-term water quality in the lower Seine: Lessons learned over 4 decades of monitoring ArchiMer
Romero, Estela; Le Gendre, Romain; Garnier, Josette; Billen, Gilles; Fisson, Cedric; Silvestre, Marie; Riou, Philippe.
The Seine River is a highly artificialised catchment in Europe, comprising both productive agricultural areas and intense industrial and commercial activity. Due to its strategic importance, monitoring programs in the river started as early as the 1970s. The present study compiles and analyses this valuable data set (1970–2014), thoroughly describing the riverine section downstream of Paris and the estuary. We identify long-term trends and shifting patterns in nutrients and oxygen, and pay special attention to the river’s evolution after the year 2000, when the European Water Framework Directive came into force. The study has a manifest management perspective, and the results are discussed on the basis of the environmental quality standards proposed in...
Tipo: Text Palavras-chave: Seine River; Water quality; Nutrients; Long-term trends; WFD; Policy.
Ano: 2016 URL: http://archimer.ifremer.fr/doc/00311/42202/41541.pdf
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Impact of environmental variability on Pinctada margaritifera life-history traits: A full life cycle deb modeling approach ArchiMer
Sangare, Nathanael; Lo-yat, Alain; Le Moullac, Gilles; Pecquerie, Laure; Thomas, Yoann; Lefebvre, Sebastien; Le Gendre, Romain; Beliaeff, Benoit; Andréfouët, Serge.
The black-lipped pearl oyster (Pinctada margaritifera) is extensively farmed in French Polynesia to produce black pearls. For a sustainable management of marine resources, studying interactions between organisms and environment, and the associated factors and processes that will impact their life cycle and thus modulate population dynamics is a major research priority. Here, we describe black-lipped pearl oyster energy acquisition and use, and its control by temperature and food concentration within the Dynamic Energy Budget (DEB) theory framework. The model parametrization was based on literature data and a specific laboratory experiment. Model validation was carried out thanks to historical in-situ datasets and a dedicated field survey. Three theoretical...
Tipo: Text Palavras-chave: Bivalve; Physiology; Bioenergetics; Dynamic energy budget theory; Environmental change; Pearl farming.
Ano: 2020 URL: https://archimer.ifremer.fr/doc/00613/72469/71614.pdf
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Vers une modélisation déterministe des écoulements de surface en Nouvelle-Calédonie. Implémentation du code GR4H sur quatre bassins versants du Grand Nouméa ArchiMer
Desclaux, Terence; Pischedda, Marine; Lemonnier, Hugues; Soulard, Benoit; Le Gendre, Romain.
Ce rapport fait suite au stage de Marine Pischedda (Master 2 La Rochelle) réalisé au sein de l’unité de recherche "Lagons, Ecosystèmes et Aquaculture Durable en Nouvelle-Calédonie" (LEAD/NC) de l’Ifremer entre février et juillet 2016. Cette étude a été conduite sur quatre bassins versants du Grand Nouméa : la Coulée, la Dumbéa Est, la Dumbéa Nord et la Couvelée. L’objectif principal était de démontrer la pertinence de l’utilisation de modèle pluie-débit au pas de temps horaire (GR4H en l’occurrence) sur les bassins versants calédoniens. Le cadre plus général de ce travail était d’aboutir à une représentation affinée du continuum terre-mer par le couplage des modèles GR4H et MARS3D développés pour simuler la circulation côtière. Les périodes d’étiages ayant...
Tipo: Text Palavras-chave: Continuum Terre-Lagon; Nouvelle-Calédonie; Rivières; GR4H; Bassins versants; Grand Nouméa; Modélisation; Débits; Land-lagoon continuum; New Caledonia; River; GR4H; Watershed; Nouméa; Model; River Flow.
Ano: 2017 URL: http://archimer.ifremer.fr/doc/00388/49969/50545.pdf
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