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| Liu, F.; Cai, L.; Crous, P.W.; Damm, U.. |
| In a preliminary analysis, 21 Colletotrichum strains with large conidia preserved in the CBS culture collection clustered with a recently described species, C. gigasporum, forming a clade distinct from other currently known Colletotrichum species complexes. Multi-locus phylogenetic analyses (ITS, ACT, TUB2, CHS-1, GAPDH) as well as each of the single-locus analyses resolved seven distinct species, one of them being C. gigasporum. Colletotrichum gigasporum and its close allies thus constitute a previously unknown species complex with shared morphological features. Five of the seven species accepted in the C. gigasporum species complex are described here as novel species, namely C. arxii, C. magnisporum, C. pseudomajus, C. radicis and C. vietnamense. A... |
| Tipo: Article / Letter to the editor |
Palavras-chave: Ascomycota; Morphology; Phylogeny; Systematics. |
| Ano: 2014 |
URL: http://www.repository.naturalis.nl/record/532358 |
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| Diao, Y.-Z.; Zhang, C.; Liu, F.; Wang, W.-Z.; Liu, L.; Cai, L.; Liu, X.-L.. |
| Anthracnose caused by Colletotrichum species is a serious disease of more than 30 plant genera. Several Colletotrichum species have been reported to infect chili in different countries. Although China is the largest chiliproducing country, little is known about the species that have been infecting chili locally. Therefore, we collected samples of diseased chili from 29 provinces of China, from which 1285 strains were isolated. The morphological characters of all strains were observed and compared, and multi-locus phylogenetic analyses (ITS, ACT, CAL, CHS-1, GAPDH, TUB2, and HIS3) were performed on selected representative strains. Fifteen Colletotrichum species were identified, with C. fioriniae, C. fructicola, C. gloeosporioides, C. scovillei, and C.... |
| Tipo: Article / Letter to the editor |
Palavras-chave: DNA phylogeny; Multi-gene analysis; Plant pathogen; Systematics. |
| Ano: 2017 |
URL: http://www.repository.naturalis.nl/record/614095 |
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| Liu, F.; Weir, B.S.; Damm, U.; Crous, P.W.; Wang, Y.; Liu, B.; Wang, M.; Zhang, M.; Cai, L.. |
| "We investigated the phylogenetic diversity of 144 Colletotrichum isolates associated with symptomatic and asymptomatic tissues of Camellia sinensis and other Camellia spp. from seven provinces in China (Fujian, Guizhou, Henan, Jiangxi, Sichuan, Yunnan, Zhejiang), and seven isolates obtained from other countries, including Indonesia, UK, and the USA. Based on multi-locus (ACT, ApMat, CAL, GAPDH, GS, ITS, TUB2) phylogenetic analyses and phenotypic characters, 11 species were distinguished, including nine well-characterised species (C. alienum, C. boninense, C. camelliae, C. cliviae, C. fioriniae, C. fructicola, C. gloeosporioides, C. karstii, C. siamense), and two novel species (C. henanense and C. jiangxiense). Of these, C. camelliae proved to be the... |
| Tipo: Article / Letter to the editor |
Palavras-chave: Camellia; Colletotrichum; Morphology; Phylogeny; Tea plants. |
| Ano: 2015 |
URL: http://www.repository.naturalis.nl/record/588701 |
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| Zhang, Z.F.; Liu, F.; Zhou,, X.; Liu, X.Z.; Liu, S.J.; Cai, L.. |
| Karst caves are distinctly characterised by darkness, low to moderate temperatures, high humidity, and scarcity of organic matter. During the years of 2014–2015, we explored the mycobiota in two unnamed Karst caves in Guizhou province, China, and obtained 563 fungal strains via the dilution plate method. Preliminary ITS analyses of these strains suggested that they belonged to 246 species in 116 genera, while 23.5 % were not identified to species level. Among these species, 85.8 % (211 species) belonged to Ascomycota; 7.3 % (18 species) belonged to Basidiomycota; 6.9 % (17 species) belonged to Mucoromycotina. The majority of these species have been previously known from other environments, mostly from plants or animals as pathogens, endophytes or via a... |
| Tipo: Article / Letter to the editor |
Palavras-chave: Diversity; ITS DNA barcodes; Morphology; Systematics; Troglobitic fungi. |
| Ano: 2017 |
URL: http://www.repository.naturalis.nl/record/629939 |
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| Wang, M.; Liu, F.; Crous, P.W.; Cai, L.. |
| Species of Nigrospora commonly occur as plant pathogens, endophytes or saprobes, and have been shown to be extremely interesting for the discovery of novel metabolites. The familial placement, as well as phylogenetic relationships among Nigrospora species remain ambiguous. In this study, Nigrospora (= Khusia) is confirmed as a monophyletic genus belonging to Apiosporaceae (Xylariales), based on a phylogeny inferred from LSU sequence data. A multi-locus phylogeny based on ITS, TEF1-α and TUB2, in conjunction with morphological characters, host associations, and ecological data was employed for species delimitation in Nigrospora, as well as identification of 165 recently collected isolates from China, and three from Europe. In total 13 novelties are proposed... |
| Tipo: Article / Letter to the editor |
Palavras-chave: Apiosporaceae; Ascomycota; Phylogeny; Species delimitation; Systematics. |
| Ano: 2017 |
URL: http://www.repository.naturalis.nl/record/635431 |
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