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Drivers and ecological consequences of dominance in periurban phytoplankton communities using networks approaches ArchiMer
Escalas, Arthur; Catherine, Arnaud; Maloufi, Selma; Cellamre, Maria; Hamlaoui, Sahima; Yepremian, Claude; Louvard, Clarisse; Trousselier, Marc; Bernard, Cécile.
Evaluating the causes and consequences of dominance by a limited number of taxa in phytoplankton communities is of huge importance in the current context of increasing anthropogenic pressures on natural ecosystems. This is of particular concern in densely populated urban areas where usages and impacts of human populations on water ecosystems are strongly interconnected. Microbial biodiversity is commonly used as a bioindicator of environmental quality and ecosystem functioning, but there are few studies at the regional scale that integrate the drivers of dominance in phytoplankton communities and their consequences on the structure and functioning of these communities. Here, we studied the causes and consequences of phytoplankton dominance in 50...
Tipo: Text Palavras-chave: Dominance; Phytoplankton; Co-occurrence network; Community cohesion; Community functioning; Periurban waterbodies.
Ano: 2019 URL: https://archimer.ifremer.fr/doc/00508/61962/66081.pdf
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Response of Core Microbial Consortia to Chronic Hydrocarbon Contaminations in Coastal Sediment Habitats ArchiMer
Jeanbille, Mathilde; Gury, Jerome; Duran, Robert; Tronczynski, Jacek; Agogue, Helene; Ben Said, Olfa; Ghiglione, Jean-francois; Auguet, Jean-christophe.
Traditionally, microbial surveys investigating the effect of chronic anthropogenic pressure such as polyaromatic hydrocarbons (PAHs) contaminations consider just the alpha and beta diversity and ignore the interactions among the different taxa forming the microbial community. Here, we investigated the ecological relationships between the three domains of life (i.e., Bacteria, Archaea, and Eukarya) using 454 pyrosequencing on the 16S rRNA and 18S rRNA genes from chronically impacted and pristine sediments, along the coasts of the Mediterranean Sea (Gulf of Lion, Vermillion coast, Corsica, Bizerte lagoon and Lebanon) and the French Atlantic Ocean (Bay of Biscay and English Channel). Our approach provided a robust ecological framework for the partition of the...
Tipo: Text Palavras-chave: Co-occurrence network; Core community; Microbial consortia; PAH; Chronic contamination; Coastal sediment.
Ano: 2016 URL: https://archimer.ifremer.fr/doc/00355/46586/46394.pdf
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