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Spatial variation in the stable isotopes of 13C and 15N and trophic position of Leporinus friderici (Characiformes, Anostomidae) in Corumbá Reservoir, Brazil Anais da ABC (AABC)
Pereira,Alexandre L.; Benedito,Evanilde; Sakuragui,Cássia M..
Stable isotopes of carbon (delta13C) and nitrogen (delta15N) were used to describe sources of energy and trophic position for adult Leporinus friderici in the area of the Corumbá Reservoir, Brazil. Samples were collected from April 1999 to March 2000. Spatial variations were not identified in the isotopic composition. The maximum and minimum contribution of C4 plants calculated integrating the variation of plants and fish were 47.7% and 2.4%, respectively. Among C3 plants, periphyton presented closer isotopic values to those observed for fishes, corresponding to an important carbon source. The proportion of ingested plant item is larger in rivers upstream from the reservoir (42.7%), which justifies the smaller trophic level among there. However, in the...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Stable isotopes; Reservoir; Leporinus friderici; Food web.
Ano: 2007 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0001-37652007000100006
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Influence of substrate on the richness and composition of Neotropical cave fauna Anais da ABC (AABC)
ZEPON,TAMIRES; BICHUETTE,MARIA ELINA.
ABSTRACT The food base in the subterranean environment consists mainly of allochthonous materials. In this environment the resources are distributed generally in a heterogeneous dispersed way and the distribution of resources and their availability determine where the terrestrial invertebrates will reside, which is important for understanding ecological relationships and to establish conservation strategies. Thus, we tested how the complexity of substrates influences the richness and composition of the subterranean terrestrial invertebrates in the Presidente Olegário karst area, southeastern Brazil. We carried out collections in six caves during both dry and wet seasons, using combined collection methods. We observed different distributions in relation to...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Brazil; Communities; Conservation; Food web; Terrestrial invertebrates; Trophic resources.
Ano: 2017 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0001-37652017000401615
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Isotopic variation among Amazonian floodplain woody plants and implications for food-web research Biota Neotropica
Correa,Sandra Bibiana; Winemiller,Kirk; Cárdenas,Dairon.
Isotopic variation within food sources adds uncertainty to models intended to reconstruct trophic pathways. Understanding this variation is pivotal for planning sampling protocols for food-web research. This study investigates natural variation in C and N stable isotopes among plant species in two western Amazon flooded forests with contrasting watershed biogeochemistry (white-water várzea-forest and black-water igapó-forest). Our objectives were to compare δ13C and δ15N of leaves and fruits between sites; assess the magnitude of within-site variation in δ13C and δ15N of leaves (várzea: 28 spp., igapó: 10 spp.) and fruits (várzea: 22 spp., igapó: 22 spp.); determine within-plant variation in δ13C and δ15N of leaf, wood and fruit tissues; and test whether...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Stable isotopes; Igapó; Várzea; Fruits; Food web; Mixing model.
Ano: 2016 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1676-06032016000200207
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Adaptive Harvesting in a Multiple-Species Coral-Reef Food Web Ecology and Society
Kramer, Daniel B; Michigan State University; dbk@msu.edu.
The utility of traditional bio-economic harvest models suffers from their dependence on two commonly used approaches. First, optimization is often assumed for harvester behavior despite system complexity and the often neglected costs associated with information gathering and deliberation. Second, ecosystem interactions are infrequently modeled despite a growing awareness that these interactions are important. This paper develops a simulation model to examine the consequences of harvesting at two trophic levels in a coral-reef food web. The model assumes adaptive rather than optimizing behavior among fishermen. The consequences of changing economic, biological, and social parameters are examined using resilience as an evaluative framework. Three general...
Tipo: Peer-Reviewed Reports Palavras-chave: Fisheries; Resource economics; Coral reefs; Resilience; Adaptive behavior; Food web; Simulation.
Ano: 2008
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Особенности формирования хроматофорного комплекса камбалы калкан Psetta maxima var. maeotica в онтогенезе в зависимости от пищевой цепи. IBSS Repository
Ханайченко, А. Н.; Битюкова, Ю. Е..
Сравнение влияния пищевой цепи на развитие пигментации (хроматофорного комплекса) у камбалы калкан Psetta maxima var. maeotica проводили от начала экзогенного питания до начала метаморфоза (3 - 18 сут) и от начала до последней стадии метаморфоза (18 – 60 сут). Группы калкана (в двух повторностях, из однородных партий икры) содержали в разных пищевых цепях: либо в типично морской, состоящей из культивируемых каланоидных копепод, Acartia tonsa (группа MZ), либо в искусственной, состоящей из солоноватоводных коловраток Brachionus plicatilis и метанауплиев Artemia franciscana (группа BZ). Для аппроксимации жирнокислотного состава применяли единую схему насыщения, в результате которой у всех кормовых организмов были близкие значения содержания и соотношения...
Tipo: Journal Contribution Palavras-chave: Калкан; Пищевая цепь; Пигментация; Меланофор; Липофор; Гуанофор; Дифференциация; Black Sea turbot; Food web; Pigmentation; Melanophore; Lipophore; Guanophore; Differentiation; Харчовий ланцюг; Пігментація; Меланофор; Ліпофор; Гуанофор; Діфференціація.
Ano: 2007 URL: http://repository.ibss.org.ua/dspace/handle/99011/849
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There's no harm in having too much: A comprehensive toolbox of methods in trophic ecology ArchiMer
Majdi, Nabil; Hette-tronquart, Nicolas; Auclair, Etienne; Bec, Alexandre; Chouvelon, Tiphaine; Cognie, Bruno; Danger, Michael; Decottignies, Priscilla; Dessier, Aurélie; Desvilettes, Christian; Dubois, Stanislas; Dupuy, Christine; Fritsch, Clémentine; Gaucherel, Cédric; Hedde, Mickaël; Jabot, Franck; Lefebvre, Sebastien; Marzloff, Martin; Pey, Benjamin; Peyrard, Nathalie; Powolny, Thibaut; Sabbadin, Régis; Thébault, Elisa; Perga, Marie-elodie.
Trophic ecology is the study of feeding interactions and food acquisition by organisms. It includes the causes and consequences of those behaviours at all levels of biological organisation. As a field of research, it crosses many disciplinary boundaries and provides knowledge that is pertinent to many other areas of ecology. Here we list and categorise the methods available to trophic ecologists whose toolbox has broadened considerably in recent years. They encompass empirical and numerical approaches with focus ranging from molecules to ecosystems. We further examine the relationship of each method to features such as the scale of observation (from microbes to largest organisms) and organisational level (from individuals to ecosystems) as well as the...
Tipo: Text Palavras-chave: Food web; Feeding interactions; Flux of energy; Computer simulations; Trophic models.
Ano: 2018 URL: https://archimer.ifremer.fr/doc/00487/59834/65986.pdf
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Effet d’une espèce ingénieur sur la diversité et le fonctionnement des communautés benthiques : l’habitat récifal à Sabellaria alveolata ArchiMer
Jones, Auriane.
Coastal zones worldwide are home to a large diversity of ecosystem engineers that perform key functions such as the recycling of organic matter and nutrients. The habitats resulting from the biological activity of these species are exposed to numerous disturbances such as over harvesting and trampling or via coastal modification. In this context, it is becoming key to understand the functioning of these engineered habitats and how they are affected by increasing disturbances. During my PhD, I used the reef habitat built by the gregarious tubiculous polychaete Sabellaria alveolata as a study case. First, the environmental and biotic changes associated with the establishment of a S. alveolata reef and its increasing disturbance were assessed, focusing on...
Tipo: Text Palavras-chave: Ingénieur de l’écosystème; Habitat récifal; Macrofaune benthique; Diversité fonctionnelle et isotopique; Production primaire benthique; Réseau trophique; Flux biogéochimiques; Traits biologiques; Ecosystem engineer; Reef habitat; Benthic macrofauna; Functional and isotopic diversity; Facilitation; Benthic primary production; Food web; Biogeochemical fluxes; Isoscape; Biological traits.
Ano: 2017 URL: https://archimer.ifremer.fr/doc/00498/60960/64363.pdf
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The mosaic of habitats of the Seine estuary: Insights from food-web modelling and network analysis ArchiMer
Tecchio, Samuele; Rius, Antonio; Dauvin, Jean-claude; Lobry, Jeremy; Lassalle, Geraldine; Morin, Jocelyne; Bacq, Nicolas; Cachera, Marie; Chaalali, Aurelie; Villanueva, Ching-maria; Niquil, Nathalie.
Ecological network analysis was applied in the Seine estuary ecosystem, northern France, integrating ecological data from the years 1996 to 2002. The Ecopath with Ecosim (EwE) approach was used to model the trophic flows in 6 spatial compartments leading to 6 distinct EwE models: the navigation channel and the two channel flanks in the estuary proper, and 3 marine habitats in the eastern Seine Bay. Each model included 12 consumer groups, 2 primary producers, and one detritus group. Ecological network analysis was performed, including a set of indices, keystoneness, and trophic spectrum analysis to describe the contribution of the 6 habitats to the Seine estuary ecosystem functioning. Results showed that the two habitats with a functioning most related to a...
Tipo: Text Palavras-chave: Trophic network; Estuary; Ecological network analysis; Ecopath with Ecosim; Food web; Ecosystem health indicators.
Ano: 2015 URL: https://archimer.ifremer.fr/doc/00270/38154/42026.pdf
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Diversity and stability of an estuarine trophic network ArchiMer
Lobry, Jeremy; David, V; Pasquaud, S; Lepage, M; Sautour, B; Rochard, E.
Estuarine areas provide highly valuable ecosystem benefits for human populations, despite being under intense demographic, economic and ecological pressures. Hence, an understanding of the structure and function of estuarine ecosystems is essential for understanding the persistence and stability of these ecosystems and their response to perturbations. This study synthesises available data and knowledge about the Gironde estuary (SW France) in a mass-balanced trophic model to illustrate potential key patterns in the functioning of the estuarine ecosystem and key elements of its stability. In order to evaluate the total direct and indirect impact on the whole community of the 2 main sources of anthropogenic perturbations in the estuarine area, mortalities...
Tipo: Text Palavras-chave: Gironde estuary; Ecopath; Diversity; Stability; Network analysis; Food web; Estuarine ecosystem.
Ano: 2008 URL: http://archimer.ifremer.fr/doc/2008/publication-4290.pdf
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Understanding patterns and processes in models of trophic cascades ArchiMer
Heath, Michael R.; Speirs, Douglas C.; Steele, John H..
Climate fluctuations and human exploitation are causing global changes in nutrient enrichment of terrestrial and aquatic ecosystems and declining abundances of apex predators. The resulting trophic cascades have had profound effects on food webs, leading to significant economic and societal consequences. However, the strength of cascades-that is the extent to which a disturbance is diminished as it propagates through a food web-varies widely between ecosystems, and there is no formal theory as to why this should be so. Some food chain models reproduce cascade effects seen in nature, but to what extent is this dependent on their formulation? We show that inclusion of processes represented mathematically as density-dependent regulation of either consumer...
Tipo: Text Palavras-chave: Bottom-up; Density dependence; Food chain; Food web; Harvesting; Model; Predator-prey; Simulation; Top-down.
Ano: 2014 URL: https://archimer.ifremer.fr/doc/00171/28249/26505.pdf
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Network analysis and inter-ecosystem comparison of two intertidal mudflat food webs (Brouage Mudflat and Aiguillon Cove, SW France) ArchiMer
Leguerrier, D; Degre, Delphine; Niquil, N.
Network analysis was used to analyse steady-state models of the food webs of two intertidat mudflat ecosystems: Aiguillon Cove and Brouage Mudflat, on the South-Western Atlantic Coast of France. The aim was to highlight emergent properties of food-web functioning in these two ecosystems and to compare these properties with other coastal ecosystems. Both ecosystems imported detritus in parallel to a high benthic primary production. They were characterised by a high diversity of resources. Both also exported living material, leading to a high quality production, quantified as export of Exergy. This export was mainly composed of cultivated bivalves during the cold season for Brouage Mudflat, and of the migration of grazing fish in Aiguillon Cove during the...
Tipo: Text Palavras-chave: Atlantic coast; Intertidal mudflat; Network analysis; Inverse analysis; Ecosystem comparison; Food web.
Ano: 2007 URL: http://archimer.ifremer.fr/doc/2007/publication-3696.pdf
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Biomass changes and trophic amplification of plankton in a warmer ocean ArchiMer
Chust, Guillem; Allen, J. Icarus; Bopp, Laurent; Schrum, Corinna; Holt, Jason; Tsiaras, Kostas; Zavatarelli, Marco; Chifflet, Marina; Cannaby, Heather; Dadou, Isabelle; Daewel, Ute; Wakelin, Sarah L.; Machu, Eric; Pushpadas, Dhanya; Butenschon, Momme; Artioli, Yuri; Petihakis, Georges; Smith, Chris; Garcon, Veronique; Goubanova, Katerina; Le Vu, Briac; Fach, Bettina A.; Salihoglu, Baris; Clementi, Emanuela; Irigoien, Xabier.
Ocean warming can modify the ecophysiology and distribution of marine organisms, and relationships between species, with nonlinear interactions between ecosystem components potentially resulting in trophic amplification. Trophic amplification (or attenuation) describe the propagation of a hydroclimatic signal up the food web, causing magnification (or depression) of biomass values along one or more trophic pathways. We have employed 3-D coupled physical-biogeochemical models to explore ecosystem responses to climate change with a focus on trophic amplification. The response of phytoplankton and zooplankton to global climate-change projections, carried out with the IPSL Earth System Model by the end of the century, is analysed at global and regional basis,...
Tipo: Text Palavras-chave: Ecosystem model; Food web; Plankton; Primary production; Sea warming; Trophic amplification.
Ano: 2014 URL: http://archimer.ifremer.fr/doc/00188/29966/28481.pdf
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The Channel habitat atlas for marine resource management (CHARM): an aid for planning and decision-making in an area under strong anthropogenic pressure ArchiMer
Martin, C. S.; Carpentier, Andre; Vaz, Sandrine; Coppin, Franck; Curet, L.; Dauvin, J. -c.; Delavenne, Juliette; Dewarumez, J. -m.; Dupuis, L.; Engelhard, G.; Ernande, Bruno; Foveau, A.; Garcia, C.; Gardel, Laure; Harrop, S.; Just, R.; Koubbi, P.; Lauria, Valentina; Meaden, G. J.; Morin, Jocelyne; Ota, Y.; Rostiaux, Emilie; Smith, R.; Spilmont, N.; Verin, Yves; Villanueva, Ching-maria; Warembourg, Caroline.
The eastern English Channel, the narrow channel of water separating northern France and southeast England is an area of intense human use of the array of resources concentrated into its relative small area. The vulnerability of living resources and their habitats brought together French and British maritime experts within a common project (called CHARM): to create an atlas of marine resource habitats in the eastern English Channel so as to provide planners and decision-makers with the necessary information to help managing the use of its living and non-living resources. This multidisciplinary and richly illustrated atlas provides abundant information on the legal framework and physical environment; benthic invertebrates, fish and their habitats; fishing...
Tipo: Text Palavras-chave: Eastern English Channel; Dover Strait; Benthos; Fish; Habitat; Ecosystem; Marine spatial planning; Fisheries; Legislation; Trophic network; Food web; GIS; Geographic Information System.
Ano: 2009 URL: http://archimer.ifremer.fr/doc/00000/11169/7523.pdf
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Implementation of an end-to-end model of the Gulf of Lions ecosystem (NW Mediterranean Sea). I. Parameterization, calibration and evaluation ArchiMer
Bănaru, Daniela; Diaz, Fréderic; Verley, Philippe; Campbell, Rose; Navarro, Jonathan; Yohia, Christophe; Oliveros-ramos, Ricardo; Mellon, Capucine; Shin, Yunne-jai.
An end-to-end model named OSMOSE-GoL has been built for the Gulf of Lions, the main French Mediterranean fishing area. This spatialized dynamic model links the coupled hydrodynamic and biogeochemical model Eco3M-S/SYMPHONIE (LTL – low trophic level model) to OSMOSE (HTL – high trophic level model). It includes 15 compartments of living organisms, five from the LTL model (i.e. nanophytoplankton, microphytoplankton, nanozooplankton, microzooplankton and mesozooplankton) and ten from the HTL model (northern krill, southern shortfin squid, European pilchard, European anchovy, European sprat, Atlantic horse mackerel, Atlantic mackerel, blue whiting, European hake and Atlantic bluefin tuna). With the exception of northern krill and European sprat, all HTL...
Tipo: Text Palavras-chave: Ecosystem modeling; Food web; Fisheries; OSMOSE; Eco3M.
Ano: 2019 URL: https://archimer.ifremer.fr/doc/00487/59860/65525.pdf
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Diverse molecular signatures for ribosomally 'active' Perkinsea in marine sediments ArchiMer
Chambouvet, Aurelie; Berney, Cedric; Romac, Sarah; Audic, Stephane; Maguire, Finlay; De Vargas, Colomban; Richards, Thomas A..
Background: Perkinsea are a parasitic lineage within the eukaryotic superphylum Alveolata. Recent studies making use of environmental small sub-unit ribosomal RNA gene (SSU rDNA) sequencing methodologies have detected a significant diversity and abundance of Perkinsea-like phylotypes in freshwater environments. In contrast only a few Perkinsea environmental sequences have been retrieved from marine samples and only two groups of Perkinsea have been cultured and morphologically described and these are parasites of marine molluscs or marine protists. These two marine groups form separate and distantly related phylogenetic clusters, composed of closely related lineages on SSU rDNA trees. Here, we test the hypothesis that Perkinsea are a hitherto under-sampled...
Tipo: Text Palavras-chave: 454 pyrosequencing; Perkinsus; Parvilucifera; Food web; Protist; Parasite.
Ano: 2014 URL: https://archimer.ifremer.fr/doc/00374/48496/48830.pdf
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Modelling the Mediterranean marine ecosystem as a whole: addressing the challenge of complexity ArchiMer
Piroddi, Chiara; Coll, Marta; Steenbeek, Jeroen; Moy, Diego Macias; Christensen, Villy.
An ecosystem modelling approach was used to understand and assess the Mediterranean marine ecosystem structure and function as a whole. In particular, 2 food web models for the 1950s and 2000s were built to investigate: (1) the main structural and functional characteristics of the Mediterranean food web during these 2 time periods; (2) the key species/functional groups and interactions; (3) the role of fisheries and their impact; and (4) the ecosystem properties of the Mediterranean Sea in comparison with other European regional seas. Our results show that small pelagic fishes, mainly European pilchards and anchovies, prevailed in terms of biomasses and catches during both periods. Large pelagic fishes, sharks and medium pelagic fishes played a key role in...
Tipo: Text Palavras-chave: Ecopath model; Food web; Ecosystem modelling; Network analysis; Fishing impact; Mediterranean Sea.
Ano: 2015 URL: https://archimer.ifremer.fr/doc/00626/73838/73681.pdf
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Influences of geothermal sulfur bacteria on a tropical coastal food web ArchiMer
Pascal, Pierre-yves; Dubois, Stanislas; Goffette, Anais; Lepoint, Gilles.
The activity of the geothermal plant at Bouillante in Guadeloupe (French West Indies) releases thioautotrophic bacteria into the coastal environment. Fish counts reveal that fish abundance increases with higher availability of this bacterial resource. In order to evaluate the trophic role of these bacteria, isotopic compositions (C, N, S) of potential consumers were evaluated on transects at increasing distance from the source of bacteria. The 3 mobile fish species examined (Abudefduf saxatilis, Acanthurus bahianus, and Stegastes partitus) ingested and assimilated chemosynthetic bacteria. Similarly, the isotopic composition of the mobile sea urchin Diadema antillarum was different close to the discharge channel, suggesting a diet mainly composed of sulfur...
Tipo: Text Palavras-chave: Shallow vent; Food web; Sulfur bacteria; Stable isotope.
Ano: 2017 URL: http://archimer.ifremer.fr/doc/00404/51511/52256.pdf
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Dietary breadth and trophic position of introduced European catfish Silurus glanis in the Tarn River (Garonne River basin), southwest France ArchiMer
Syvaeranta, Jari; Cucherousset, Julien; Kopp, Dorothee; Crivelli, Alain; Cereghino, Regis; Santoul, Frederic.
Although being a widely introduced and successfully established species, the European catfish Silurus glanis L. (the world’s third largest freshwater fish) remains poorly studied in its introduced areas. Here we studied the trophic ecology of non-native European catfish in a large river system in south-western France using stomach content and stable isotope analyses (SIA). We used fin samples for SIA of catfish and hence tested the validity of using fin tissue as a proxy for muscle in SIA. The mean δ15N and δ13C values analysed from fin tissues did not differ from those analysed from muscle tissue and reflected strong and consistent relationships (r2 = 0.95 for carbon and r2 = 0.98 for nitrogen). The δ15N values varied almost 5‰ among the analysed catfish...
Tipo: Text Palavras-chave: Stable isotopes; Introduced species; Top predator; River; Food web; Fin clips.
Ano: 2010 URL: http://archimer.ifremer.fr/doc/00168/27896/26159.pdf
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Réseau trophique de l'anse de l'Aiguillon : dynamique et structure spatiale de la macrofaune et des limicoles hivernants ArchiMer
Degre, Delphine.
The Aiguillon Cove has been preserved as Natural Reserves since 1996 and 1999 for its international importance as wintering areas for waterbirds. The benthic communities of this a macrotidal bay were still little studied. In order to understand the spatial pattern and the dynamics of the main compartments of its trophic network, two cartographies were carried out at the time of the departure (March) and the arrival (October) of the waders. A monthly study was carried out too in three stations of the upper mudflat. The spatio-temporal homogeneity of the granulometry of the sediments and the strong seasonal variation of the salinity of pore water were highlighted. The molluscs' diversity is low, especially on the upper mudflat where abundance of Hydrobia...
Tipo: Text Palavras-chave: Carrying capacity; Inverse analysis; Spatio temporal patterns; Food web; Isotope; Waders; Molluscs bivalves; Aiguillon Cove; Capacité d'accueil; Analyse inverse; Dynamique des populations; Structure spatiale; Réseau trophique; Isotope; Limicoles; Bivalves; Mollusques; Anse de l'Aiguillon.
Ano: 2006 URL: http://archimer.ifremer.fr/doc/2006/these-2097.pdf
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Diversité structurelle et fonctionnelle des peuplements sablo-vaseux de Bretagne sud : Impact de l'expansion d'Haploops nirae ArchiMer
Rigolet, Carine.
This thesis aims here, based on the case of the Bay of Concarneau, to understand the impact of the development of dense populations of the tubiculous amphipod Haploops nirae on the structural and functional diversity of sandy-mud communities of South Brittany. The study of Haploops communities was developed on various levels of organization of life, from the specific role of Haploops nirae to functional role of Haploops community in the ecosystem passing through the description of the community composition and its role on the biodiversity. Our results suggest firstly that the functional role of Haploops nirae alone (filtration pressure, secondary production) is potentially important. Moreover, the physical changes induced by Haploops were found to have...
Tipo: Text Palavras-chave: Ampeliscidae; Réseau trophique; Diversité fonctionnelle; Macrofaune benthique; Diversité; Bretagne Sud; Espèce ingénieure; Ampeliscidae; Benthic macrofauna diversity; Food web; Functional diversity; Engineer species; South Brittany.
Ano: 2013 URL: http://archimer.ifremer.fr/doc/00134/24549/22582.pdf
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