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| Mari, Jocelyne; Poulos, Bonnie; Lightner, Donald; Bonami, Jean-robert. |
| The single-stranded genomic RNA of Taura syndrome virus (TSV) is 10205 nucleotides in length, excluding the 3' poly(A) tail, and contains two large open reading frames (ORFs) that are separated by an intergenic region of 207 nucleotides. The ORFs are flanked by a 377 nucleotide 5' untranslated region (UTR) and a 226 nucleotide 3' UTR followed by a poly(A) tail. The predicted amino acid sequence of ORF1 revealed sequence motifs characteristic of a helicase, a protease and an RNA-dependent RNA polymerase, similar to the non-structural proteins of several plant and animal RNA viruses. In addition, a short amino acid sequence located in the N-terminal region of ORF1 presented a significant similarity with a baculovirus IAP repeat (BIR) domain of inhibitor of... |
| Tipo: Text |
Palavras-chave: Genomic characterization; Taura syndrome; Virus; Shrimp disease; Penaeidae. |
| Ano: 2002 |
URL: https://archimer.ifremer.fr/doc/2002/publication-715.pdf |
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| Cruz,Taís Fukuta; Batista,Thiago Neves; Vieira,Ester Mariane; Portela,Luiz Marcos Frediani; Baccarin,Amanda Mahnke; Gradiz,Jéssica Jehle; Araújo Junior,João Pessoa. |
| ABSTRACT: Because Canine circovirus (CanineCV) is a new species of the genus Circovirus, several issues related to its epidemiology, pathogenesis and clinical disease remain unknown. Thus, this study aimed to perform the characterization of the first complete genome sequence of CanineCV detected in a dog with diarrhea in Brazil. A stool sample was collected of a ten-month-old female German Shepherd dog which had signs of intermittent hemorrhagic gastroenteritis, vomiting, and a history of eating raw pork. The complete CanineCV genome was sequenced by Next-Generation Sequencing. The sequence had 2,063 nucleotides, showed a typical genomic organization for circovirus, and was grouped with strain 214 described in the United States by phylogenetic analysis.... |
| Tipo: Info:eu-repo/semantics/article |
Palavras-chave: Circovirus; Canine circovirus; Genomic characterization; Gastroenteritis. |
| Ano: 2020 |
URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0103-84782020000500451 |
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