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An evaluation of surface micro- and mesoplastic pollution in pelagic ecosystems of the Western Mediterranean Sea ArchiMer
Faur, Florian; Saini, Camille; Potter, Gael; Galgani, Francois; De Alencastro, Luiz Felippe; Hagmann, Pascal.
This study examines the distribution, abundance and characteristics of surface micro- and mesoplastic debris in the Western Mediterranean Sea. 41 samples were collected in 2011 (summer) and 2012 (summer). Results, firstly, revealed that micro- (<5mm) and mesoplastic debris were widely and uniformly distributed in this area with average concentrations of 130,000 parts/km(2) and 5700 parts/km(2), respectively. Importantly, a strong correlation between micro- and mesoplastic concentrations was identified. Secondly, a classification based on the shape and appearance of microplastics indicated the predominant presence of fragments (73 %) followed by thin films (14 %). Thirdly, the average mass ratio of microplastic to dry organic matter has been measured at...
Tipo: Text Palavras-chave: Plastic debris; Marine pollution; Mediterranean Sea; Surface net tow; Microplastic pollution; Neustonic plastic.
Ano: 2015 URL: http://archimer.ifremer.fr/doc/00275/38629/37311.pdf
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Potential feeding and spawning habitats of Atlantic bluefin tuna in the Mediterranean Sea ArchiMer
Druon, Jean-noel; Fromentin, Jean-marc; Aulanier, Florian; Heikkonen, Jukka.
Atlantic bluefin tuna Thunnus thynnus (ABFT) is a fish of high market value which has recently become strongly overexploited, notably in the Mediterranean Sea. This area is an essential habitat for ABFT reproduction and growth. We present here an approach for deriving the daily mapping of potential ABFT feeding and spawning habitats based on satellite-derived sea surface temperature (SST) and chl a concentration. The feeding habitat was mainly derived from the simultaneous occurrence of oceanic fronts of temperature and chl a content while the spawning habitat was mostly inferred from the heating of surface waters. Generally, higher chl a contents were found to be preferred for the feeding habitat and a minimum SST value was found for the spawning habitat....
Tipo: Text Palavras-chave: Habitat mapping; Bluefin tuna; Thunnus thynnus; Feeding; Spawning; Mediterranean Sea; Remote sensing; Satellite data.
Ano: 2011 URL: http://archimer.ifremer.fr/doc/00049/16053/13549.pdf
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Functional differences between fish communities on artificial and natural reefs: a case study along the French Catalan coast ArchiMer
Koeck, Barbara; Tessier, Anne; Brind'Amour, Anik; Pastor, Jeremy; Bijaoui, Benjamin; Dalias, Nicolas; Astruch, Patrick; Saragoni, Gilles; Lenfant, Philippe.
In the context of growing anthropogenic disturbances that deeply alter marine coastal ecosystems, various management tools are used to protect biodiversity, such as fishing gear limitations, fishing quotas, protected areas or the creation of artificial reefs (ARs). In contrast to the other management tools, ARs require a modification of natural habitats. We used underwater visual censuses to investigate the effect of habitat modification on the structure of fish communities by comparing a natural reef (NR) to ARs with different habitat complexity. Different fish assemblage descriptors were used to assess species- and functional- and community-level aspects of the assemblages. ARs were rapidly colonized by adult fishes and presented community compositions...
Tipo: Text Palavras-chave: Ecological niche; Fish community; Fisheries management; Functional diversity; Gulf of Lion; Habitat complexity; Mediterranean Sea; Underwater visual census.
Ano: 2014 URL: https://archimer.ifremer.fr/doc/00189/30029/28514.pdf
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Measurement and analysis of small pelagic fish condition: A suitable method for rapid evaluation in the field ArchiMer
Brosset, Pablo; Fromentin, Jean-marc; Menard, Frederic; Pernet, Fabrice; Bourdeix, Jean-herve; Bigot, Jean-louis; Van Beveren, Elisabeth; Perez Rodia, Maria A.; Choy, Sandrine; Saraux, Claire.
As condition is a key variable in population dynamics (especially for survival, growth and reproduction), the use of well-defined and accurate fish condition indices is capital. In particular, condition indices (morphometric, bioenergetic and biochemical) have never been compared and validated for the European anchovy Engraulis encrasicolus, the European pilchard Sardina pilchardus and the European sprat Sprattus sprattus. The accuracy of two indirect methods, the morphometric relative condition index Kn and the bioenergetics index determined with the Distell Fish Fatmeter was investigated by comparing with a direct measure of relative lipid content carried out with a thin layer chromatography-flame ionization detector. Estimations from the fatmeter...
Tipo: Text Palavras-chave: Anchovy; Fatmeter; Lipids; Mediterranean Sea; Sardine; Sprat.
Ano: 2015 URL: https://archimer.ifremer.fr/doc/00226/33741/32304.pdf
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Preparing the New Phase of Argo: Scientific Achievements of the NAOS Project ArchiMer
Le Traon, Pierre-yves; D'Ortenzio, Fabrizio; Babin, Marcel; Leymarie, Edouard; Marec, Claudie; Pouliquen, Sylvie; Thierry, Virginie; Cabanes, Cecile; Claustre, Hervé; Desbruyeres, Damien; Lacour, Leo; Lagunas, Jose-luis; Maze, Guillaume; Mercier, Herle; Penkerc'H, Christophe; Poffa, Noe; Poteau, Antoine; Prieur, Louis; Racape, Virginie; Randelhoff, Achim; Rehm, Eric; Schmechtig, Catherine Marie; Taillandier, Vincent; Wagener, Thibaut; Xing, Xiaogang.
Argo, the international array of profiling floats, is a major component of the global ocean and climate observing system. In 2010, the NAOS (Novel Argo Observing System) project was selected as part of the French “Investissements d’Avenir” Equipex program. The objectives of NAOS were to consolidate the French contribution to Argo’s core mission (global temperature and salinity measurements down to 2000 m), and also to develop the future generation of French Argo profiling floats and prepare the next phase of the Argo program with an extension to the deep ocean (Deep Argo), biogeochemistry (BGC-Argo) and polar seas. This paper summarizes how NAOS has met its objectives. The project significantly boosted France’s contribution to Argo’s core mission by...
Tipo: Text Palavras-chave: Profiling floats; Deep ocean; Biogeochemistry; Mediterranean Sea; Arctic; Atlantic; Argo.
Ano: 2020 URL: https://archimer.ifremer.fr/doc/00654/76584/77729.pdf
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Observations of open-ocean deep convection in the northwestern Mediterranean Sea: Seasonal and interannual variability of mixing and deep water masses for the 2007–2013 period ArchiMer
Houpert, L.; Durrieu De Madron, X. Durrieu; Testor, P.; Bosse, A.; D'Ortenzio, F.; Bouin, M. N.; Dausse, D.; Le Goff, H.; Kunesch, S.; Labaste, M.; Coppola, L.; Mortier, L.; Raimbault, P..
We present here a unique oceanographic and meteorological dataset focus on the deep convection processes. Our results are essentially based on in situ data (mooring, research vessel, glider, and profiling float) collected from a multi-platform and integrated monitoring system (MOOSE: Mediterranean Ocean Observing System on Environment), which monitored continuously the northwestern Mediterranean Sea since 2007, and in particular high-frequency potential temperature, salinity and current measurements from the mooring LION located within the convection region. From 2009 to 2013, the mixed layer depth reaches the seabed, at a depth of 2330m, in February. Then, the violent vertical mixing of the whole water column lasts between 9 and 12 days setting up the...
Tipo: Text Palavras-chave: Physical oceanography; Ocean observations; Dense water formation; Open-ocean deep convection; Mixed layer; Gulf of lions; Deep water; Mediterranean Sea.
Ano: 2016 URL: https://archimer.ifremer.fr/doc/00355/46588/46400.pdf
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Ecological status of coralligenous assemblages: Ten years of application of the ESCA index from local to wide scale validation ArchiMer
Piazzi, L.; Gennaro, P.; Cecchi, E.; Bianchi, C.n.; Cinti, M.f.; Gatti, G.; Guala, I.; Morri, C.; Sartoretto, Stephane; Serena, F.; Montefalcone, M..
This paper aims at collating and reviewing all data collected using the ESCA (Ecological Status of Coralligenous Assemblages) index from 2009 to 2018 during different local applications, in order to evaluate at large spatial scale its effectiveness and temporal variability. To this scope, the large-scale response of ESCA to anthropogenic disturbance was tested comparing ESCA values calculated at 42 sites of the Western Mediterranean Sea with the anthropization index. Moreover, the sensitivity of ESCA to punctual human disturbance and the robustness of the index across the natural space and time variability were evaluated. The large spatial scale study showed significant correlation between ESCA and the anthropization index, while very low correlation was...
Tipo: Text Palavras-chave: Coralligenous reefs; Ecological index; Impact evaluation; Mediterranean Sea; Monitoring.
Ano: 2021 URL: https://archimer.ifremer.fr/doc/00658/77011/78271.pdf
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Spatial graphs highlight how multi‐generational dispersal shapes landscape genetic patterns ArchiMer
Boulanger, Emilie; Dalongeville, Alicia; Andrello, Marco; Mouillot, David; Manel, Stéphanie.
Current approaches that compare spatial genetic structure of a given species and the dispersal of its mobile phase can detect a mismatch between both patterns mainly due to processes acting at different temporal scales. Genetic structure result from gene flow and other evolutionary and demographic processes over many generations, while dispersal predicted from the mobile phase often represents solely one generation on a single time‐step. In this study, we present a spatial graph approach to landscape genetics that extends connectivity networks with a stepping‐stone model to represent dispersal between suitable habitat patches over multiple generations. We illustrate the approach with the case of the striped red mullet Mullus surmuletus in the Mediterranean...
Tipo: Text Palavras-chave: Genetic connectivity; Mediterranean Sea; Mullus surmuletus; Seascape genetics; Spatial graphs; Stepping-stone dispersal.
Ano: 2020 URL: https://archimer.ifremer.fr/doc/00630/74166/73779.pdf
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Plastic debris occurrence, convergence areas and fin whales feeding ground in the Mediterranean Marine Protected Area Pelagos Sanctuary: a modelling approach ArchiMer
Fossi, Maria Cristina; Romeo, Teresa; Panti, Matteo; Marsili, Letizia; Campani, Tommaso; Canese, Simonepietro; Galgani, Francois; Druon, Jean-noël; Airoldi, Sabina; Taddei, Stefano; Fattorini, Maria; Brandini, Carlo; Lapucci, Chiara.
The Mediterranean Sea is greatly affected by marine litter. In this area, research on the impact of plastic debris (including microplastics) on biota, particularly large filter-feeding species such as the fin whale (Balaenoptera physalus), is still in its infancy. We investigated the possible overlap between microplastic, mesoplastic and macrolitter accumulation areas and the fin whale feeding grounds in in a pelagic Specially Protected Area of Mediterranean Importance (SPAMI): the Pelagos Sanctuary. Models of ocean circulation and fin whale potential habitat were merged to compare marine litter accumulation with the presence of whales. Additionally, field data on microplastics, mesoplastics and macrolitter abundance and cetacean presence were...
Tipo: Text Palavras-chave: Floating plastic debris; Microplastics; Mediterranean Sea; Convergence areas; Modeling; Fin whales; Marine Protected Area.
Ano: 2017 URL: https://archimer.ifremer.fr/doc/00386/49763/50356.pdf
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Morphological control of slope instability in contourites: a geotechnical approach ArchiMer
Miramontes, Elda; Garziglia, Sebastien; Sultan, Nabil; Jouet, Gwenael; Cattaneo, Antonio.
Contourite drifts are sediment bodies formed by the action of bottom currents. They are common features found on continental slopes and are often affected by slope failure. However, processes controlling slope instability in contourite depositional systems are still not well constrained, and it is not clear whether contourites have particular properties that make them more susceptible to slope failure. In this study, we compare sedimentological and geotechnical properties of contouritic and hemipelagic sediments within the Corsica Trough (northern Tyrrhenian Sea) using geophysical data sets and sediment cores in order to get a better understanding of the controlling factors of slope stability. Geomorphological and slope stability analyses reveal that...
Tipo: Text Palavras-chave: Sediment drift; Submarine landslide; Undrained shear strength; Hemipelagite; Mediterranean Sea.
Ano: 2018 URL: https://archimer.ifremer.fr/doc/00425/53636/56652.pdf
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An integrated system for managing multidisciplinary oceanographic data collected in the Mediterranean Sea during the basin-scale research project EU/MAST-MATER (1996-2000) ArchiMer
Maillard, Catherine; Balopoulos, E; Giorgetti, A; Fichaut, Michele; Iona, A; Larour, Michel; Latrouite, Armelle; Manca, B; Maudire, Gilbert; Nicolas, P; Sanchez Cabeza, J.
An advanced computer and communication technology was used to develop an integrated system and software tools for managing a great diversity of oceanographic data collected in the Mediterranean Sea during 1996-2000. Data were obtained during 108 sea cruises, carried out within the framework of the large-scale international research project MATER (mass transfer and ecosystem response), which was financially supported by the Marine Science and Technology (MAST) Programme of the European Union (EU). Data collection involved the active participation of various research vessels and personnel coming from 58 different laboratories of 13 countries. Data formatting as well as automatic and visual data quality controls were implemented using internationally accepted...
Tipo: Text Palavras-chave: Data product; Quality assurance; Data management; Ocean data; Mediterranean Sea.
Ano: 2002 URL: http://archimer.ifremer.fr/doc/2002/publication-489.pdf
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Pleuronectes platessa, a ghost fish in the Mediterranean Sea? ArchiMer
Lleonart, Jordi; Farrugio, Henri.
European plaice Pleuronectes platessa often appears in ichthyological check lists for the Mediterranean Sea, as well as in regional field guides and even in some official national landings statistics. However we have not found a single ichthyologist or fisheries biologist who has actually observed this fish in the Mediterranean. The ichthyologic sources available, from classical antiquity to recent times, were checked in order to follow the track of the citations (i.e. true field observations or citations of former authors), and to try to detect misidentifications, if any. Few of these citations appear to be reliable and misidentifications with flounder Platichthys fie:sus are frequent. Recent scientific trawl surveys have not reported any observations of...
Tipo: Text Palavras-chave: Pleuronectes platessa; Plaice; Mediterranean Sea; Pleuronectidae.
Ano: 2012 URL: http://archimer.ifremer.fr/doc/00074/18570/16122.pdf
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Utilisation de Posidonia oceanica (L.) Delile comme bio-indicateur de la contamination métallique ArchiMer
Lafabrie, Céline.
The coastal zone of the continental shelf contains a high ecological richness. However, this zone is very fragile towards xenobiotics ; the pollution of this environment can be damaging to the structure of the biocenoses and to the productivity of the ecosystems. Metals, contrarily to numerous contaminants, are normal constituents of the environment at a trace level, but are all toxic above a certain threshold. At the end of the 1970s, several researchers proposed the use of organisms to evaluate the quality of the marine environment ; it is in this context that the bio-indicator concept arises. The seagrass Posidonia oceanica (L.) Delile, endemic of the Mediterranean Sea, has been the subject of several works proposing to use this species to determine the...
Tipo: Text Palavras-chave: Mediterranean Sea; Human impacts; Metal contamination; Trace metals; Bio indicator; Posidonia oceanica; Méditerranée; Impacts anthropiques; Contamination métallique; Métaux traces; Bio indicateur; Posidonia oceanica.
Ano: 2007 URL: http://archimer.ifremer.fr/doc/2007/these-3082.pdf
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Annual variation in neustonic micro- and meso-plastic particles and zooplankton in the Bay of Calvi (Mediterranean–Corsica) ArchiMer
Collignon, Amandine; Hecq, Jean-henri; Galgani, Francois; Collard, France; Goffart, Anne.
The annual variation in neustonic plastic particles and zooplankton was studied in the Bay of Calvi (Corsica) between 30 August 2011 and 7 August 2012. Plastic particles were classified into three size classes, small microplastics (0.2–2 mm), large microplastics (2–5 mm) and mesoplastics (5–10 mm). 74% of the 38 samples contained plastic particles of varying composition: e.g. filaments, polystyrene, thin plastic films. An average concentration of 6.2 particles/100 m2 was observed. The highest abundance values (69 particles/100 m2) observed occurred during periods of low offshore wind conditions. These values rose in the same order of magnitude as in previous studies in the North Western Mediterranean. The relationships between the abundance values of the...
Tipo: Text Palavras-chave: Microplastic particles; Mesoplastic particles; Neuston; Mediterranean Sea.
Ano: 2014 URL: http://archimer.ifremer.fr/doc/00169/28064/27275.pdf
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Grands invertébrés et poissons observés par les campagnes scientifiques. Atlas de distribution. Bilan 2008 ArchiMer
Trenkel, Verena; Berthele, Olivier; Lorance, Pascal; Bertrand, Jacques; Brind'Amour, Anik; Cochard, Marie-laure; Coppin, Franck; Leaute, Jean-pierre; Mahe, Jean-claude; Morin, Jocelyne; Rochet, Marie-joelle; Salaun, Michele; Souplet, Arnauld; Verin, Yves.
Depuis une vingtaine d'années, l'Ifremer organise des campagnes de pêche scientifique en mer du Nord, Manche, Atlantique et Méditerranée concernant les ressources pélagiques, démersales et benthiques. L'objectif prioritaire est de produire des indices d'abondance des principales espèces commerciales. Elles recueillent également des données sur les espèces capturées non commerciales. Les campagnes sont réalisées selon des plans d'échantillonnage standardisés. L'engin de pêche et son gréement, la position des stations, le tri des captures, les prélèvements biologiques suivent des protocoles fixés. Chaque zone étudiée est découpée en fonction de la profondeur, de la latitude ou d'autres critères. L'échantillonnage prévoit un nombre de traits de chalut...
Tipo: Text Palavras-chave: Populations; Halieutique; Bulletin; Méditerranée; Golfe de Gascogne; Manche; Mer du Nord; France; Pêche; Campagnes à la mer; Atlas; Survey; Mediterranean Sea; Bay of Biscay; English Channel; North Sea; France; Populations; Fishery science; Bulletin; Atlas.
Ano: 2009 URL: http://archimer.ifremer.fr/doc/2009/rapport-6976.pdf
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Active biomonitoring in Greek coastal waters: Application of the integrated biomarker response index in relation to contaminant levels in caged mussels ArchiMer
Tsangaris, Catherine; Hatzianestis, Ioannis; Catsiki, Vassiliki-angelique; Kormas, Konstantinos Ar; Strogyloudi, Evangelia; Neofitou, Christos; Andral, Bruno; Galgani, Francois.
An integrated approach using biomarkers and contaminant levels in mussels Mytilus galloprovincialis L was employed to assess chemical contamination in Greek coastal waters within the framework of the MYTIMED program. Biomarkers (metallothioneins, glutathione S-transferase, catalase, acetylcholinesterase and RNA:DNA ratio) have been previously described in mussels caged at 14 sites in coastal areas influenced by different types of anthropogenic activities. This study applied a biomarker index, the Integrated Biomarker Response (IBR) to summarize biomarker responses and relate stress levels to concentrations of organochlorine compounds (PCBs, DDTs), polycyclic aromatic hydrocarbons (PAHs), and metals (Cu, Ni, Fe, Zn) measured in the mussel tissues. The IBR...
Tipo: Text Palavras-chave: Pollution; Biomarkers; Monitoring; Mussel caging; Mytilus galloprovincialis; Mediterranean Sea.
Ano: 2011 URL: http://archimer.ifremer.fr/doc/00059/17033/14718.pdf
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Characterizing, modelling and understanding the climate variability of the deep water formation in the North-Western Mediterranean Sea ArchiMer
Somot, Samuel; Houpert, Loic; Sevault, Florence; Testor, Pierre; Bosse, Anthony; Taupier-letage, Isabelle; Bouin, Marie-noelle; Waldman, Robin; Cassou, Christophe; Sanchez-gomez, Emilia; Durrieu De Madron, Xavier; Adloff, Fanny; Nabat, Pierre; Herrmann, Marine.
Observing, modelling and understanding the climate-scale variability of the deep water formation (DWF) in the North-Western Mediterranean Sea remains today very challenging. In this study, we first characterize the interannual variability of this phenomenon by a thorough reanalysis of observations in order to establish reference time series. These quantitative indicators include 31 observed years for the yearly maximum mixed layer depth over the period 1980–2013 and a detailed multi-indicator description of the period 2007–2013. Then a 1980–2013 hindcast simulation is performed with a fully-coupled regional climate system model including the high-resolution representation of the regional atmosphere, ocean, land-surface and rivers. The simulation reproduces...
Tipo: Text Palavras-chave: Deep water formation; Open-sea deep convection; Interannual variability; Mediterranean Sea; Regional climate models; Climate trends.
Ano: 2016 URL: http://archimer.ifremer.fr/doc/00348/45948/45654.pdf
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Fluctuations à long terme du thon rouge: validité, origines et conséquences ArchiMer
Ravier, Christelle.
Describe and gain understanding on fluctuations in animal population over time and space is a central goal of population ecology. This is also crucial to ensure the sustainable management of exploited resources, particularly those with complex population dynamics such as the bluefin tuna. The goal of this work is to collect bluefin tuna catches from the ancestral Mediterranean and Atlantic trap fisheries to (i) characterise long-term fluctuations in bluefin tuna population migrating in the Mediterranean, (ii) analyse their causes et (iii) assess their implications for fisheries management. The bluefin tuna main biological and ecological characteristics are first detailed. Then, the first part presents the trap fishery, and the process of collect and...
Tipo: Text Palavras-chave: Biological reference point; V.p.a.; Management; Migration; N.a.o.; Temperature; Tunas/environment relationships; Population dynamics; Periodic fluctuations; Long term trend; Time series; East Atlantic; Mediterranean Sea; Trap fishery; Thunnus thynnus; Points biologiques de référence; V.p.a.; Modèle global; Migration; N.a.o.; Température; Relation thon/environnement; Dynamique de population; Fluctuations périodiques; Tendances à long terme; Séries temporelles; Atlantique Est; Méditerranée; Madrague; Thunnus thynnus.
Ano: 2003 URL: http://archimer.ifremer.fr/doc/2003/these-65.pdf
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Regional Empirical Algorithms for an Improved Identification of Phytoplankton Functional Types and Size Classes in the Mediterranean Sea Using Satellite Data ArchiMer
Di Cicco, Annalisa; Sammartino, Michela; Marullo, Salvatore; Santoleri, Rosalia.
Regional relationships to estimate the main Phytoplankton Functional Types (PFTs) and Size Classes (PSCs) from satellite data are presented. Following the abundance-based approach and selecting the Total Chlorophyll a (TChla) as descriptor of the trophic status of the environment, empirical relations between the TChla concentration and seven accessory pigments, marker for the main algal groups, have been developed for the Mediterranean Sea. Using only in-situ data acquired in this basin, firstly a previous regional diagnostic pigment analysis has been conducted to evaluate the specific pigment ratios featuring the phytoplankton assemblage that occurs in the Mediterranean Sea. Secondly, the new regional PFT and PSC algorithms have been calibrated and...
Tipo: Text Palavras-chave: PFTs; PSCs; Mediterranean Sea; Regional algorithms; Ocean color.
Ano: 2017 URL: https://archimer.ifremer.fr/doc/00468/57983/60372.pdf
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Impact of iceberg melting on Mediterranean thermohaline circulation during Heinrich events ArchiMer
Sierro, Fj; Hodell, Da; Curtis, Jh; Flores, Ja; Reguera, I; Colmenero-hidalgo, E; Barcena, Ma; Grimalt, Jo; Cacho, I; Frigola, J; Canals, M.
Down-core samples of planktonic and benthic foraminifera were analyzed for oxygen and carbon isotopes in International Marine Past Global Changes Study (IMAGES) core MD99-2343 in order to study the interactions between climate change in the Northern Hemisphere and the western Mediterranean thermohaline circulation at times of Heinrich events (HE). Our results confirm the antiphase correlation between enhanced North Atlantic Deep Water formation and low ventilation in the Mediterranean. However, this study reveals that this antiphase relationship in deepwater formation between the North Atlantic and Mediterranean was interrupted during times of HE when the injection of large volumes of water from melting icebergs reached the entrance to the Mediterranean....
Tipo: Text Palavras-chave: Climatic change; Heinrich events; Mediterranean Sea; Carbon and oxygen isotopes; Thermohaline circulation; Pleistocene.
Ano: 2005 URL: https://archimer.ifremer.fr/doc/00232/34354/32759.pdf
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