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Xylella fastidiosa comparative genomic database is an information resource to explore the annotation, genomic features, and biology of different strains Genet. Mol. Biol.
Varani,Alessandro M.; Monteiro-Vitorello,Claudia B.; Almeida,Luiz G.P. de; Souza,Rangel C.; Cunha,Oberdan L.; Lima,Wanessa C.; Civerolo,Edwin; Sluys,Marie-Anne Van; Vasconcelos,Ana T.R..
The Xylella fastidiosa comparative genomic database is a scientific resource with the aim to provide a user-friendly interface for accessing high-quality manually curated genomic annotation and comparative sequence analysis, as well as for identifying and mapping prophage-like elements, a marked feature of Xylella genomes. Here we describe a database and tools for exploring the biology of this important plant pathogen. The hallmarks of this database are the high quality genomic annotation, the functional and comparative genomic analysis and the identification and mapping of prophage-like elements. It is available from web site http://www.xylella.lncc.br.
Tipo: Info:eu-repo/semantics/article Palavras-chave: Genome annotation and assembly; Comparative genomics; Mobile genetic elements.
Ano: 2012 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572012000100021
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De nouveaux systèmes hôtes-virus associés aux sources hydrothermales océaniques profondes ArchiMer
Boyer, Coraline.
Our knowledge of the viral diversity associated to microorganisms inhabiting the deep-sea hydrothermal vents is still limited. Only a few studies have focused on viral abundance and impact on microbial mortality within these ecosystems. A limited number of viruses (6 bacterioviruses and 2 archaeoviruses) were isolated from these environments and characterized. Two viruses associated to hyperthermophilic anaerobic Archaea, from the Thermococcales order, have been described in our laboratory. In order to deepen our knowledge on the viral diversity of these extreme environments, we have extended our investigation to the bacterial order of Thermotogales. This order is composed of anaerobic chemoorganotrophic bacteria that are, for the most part,...
Tipo: Text Palavras-chave: Bactériovirus; Sources hydrothermales profondes; Éléments génétiques mobiles; Océans profonds; Bacterioviruses; Thermotogales; Deep sea; Hydrothermal vents; Mobile genetic elements.
Ano: 2016 URL: https://archimer.ifremer.fr/doc/00609/72129/70881.pdf
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Heavy Metal Resistance Strategies of Acidophilic Bacteria and Their Acquisition: Importance for Biomining and Bioremediation Biol. Res.
Navarro,Claudio A; von Bernath,Diego; Jerez,Carlos A.
Microbial solubilizing of metals in acid environments is successfully used in industrial bioleaching of ores or biomining to extract metals such as copper, gold, uranium and others. This is done mainly by acidophilic and other microorganisms that mobilize metals and generate acid mine drainage or AMD, causing serious environmental problems. However, bioremediation or removal of the toxic metals from contaminated soils can be achieved by using the specific properties of the acidophilic microorganisms interacting with these elements. These bacteria resist high levels of metals by using a few "canonical" systems such as active efflux or trapping of the metal ions by metal chaperones. Nonetheless, gene duplications, the presence of genomic islands, the...
Tipo: Journal article Palavras-chave: Heavy metal resistance; Genomic islands; Environmental bacteria; Biomining; Metal bioremediation; Mobile genetic elements.
Ano: 2013 URL: http://www.scielo.cl/scielo.php?script=sci_arttext&pid=S0716-97602013000400008
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Mobile genetic elements related to carbapenem resistance in Acinetobacter baumannii BJM
Pagano,Mariana; Martins,Andreza Francisco; Barth,Afonso Luis.
Abstract Acinetobacter baumannii is widely recognized as an important pathogen associated with nosocomial infections. The treatment of these infections is often difficult due to the acquisition of resistance genes. A. baumannii presents a high genetic plasticity which allows the accumulation of these resistance determinants leading to multidrug resistance. It is highlighted the importance of the horizontal transfer of resistance genes, through mobile genetic elements and its relationship with increased incidence of multidrug resistant A. baumannii in hospitals. Considering that resistance to carbapenems is very important from the clinical and epidemiological point of view, the aim of this article is to present an overview of the current knowledge about...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Acinetobacter baumannii; Antimicrobial resistance; Mobile genetic elements; Carbapenem resistance.
Ano: 2016 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822016000400785
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