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Reconstructing individual shape histories of fish otoliths: A new image-based tool for otolith growth analysis and modeling ArchiMer
Fablet, Ronan; Chessel, Anatole; Carbini, Sebastien; Benzinou, Abdesslam; De Pontual, Helene.
In this paper is presented a novel image processing tool for the extraction of geometric information in otolith images. It relies on the reconstruction of individual otolith shape histories from otolith images. Based on the proposed non-parametric level-set representation of otolith shape history, applications to the extraction of growth axes and ring structures in otolith images are first considered. A second category of applications concern the analysis of 2D otolith growth. The potential of the proposed framework is illustrated on real otolith images for various species (e.g., cod, pollock) and discussed with a particular emphasis on the genericity of the approach and on applications such as otolith shape analysis, multi-proxy otolith analysis, otolith...
Tipo: Text Palavras-chave: 2D otolith growth; Growth axis extraction; Growth ring extraction; Shape dynamics; Otolith imaging.
Ano: 2009 URL: http://archimer.ifremer.fr/doc/2009/publication-6319.pdf
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Automatic morphological detection of otolith nucleus ArchiMer
Cao, Frédéric; Fablet, Ronan.
This paper deals with the automation of the acquisition of age and growth data from the analysis of otolith images. One of the key component of such it system is the automatic detection of the growth center, which serves as the basis for further processing (2D ring segmentation, age and growth estimation,...). To this end, we develop a new and well-founded approach combining a morphological analysis of image level sets to the a contrario, detection principle. This approach leads to a robust parameterless scheme, whose efficiency is demonstrated by an evaluation carried out for a set of several hundred of plaice otoliths. (c) 2005 Elsevier B.V. All rights reserved.
Tipo: Text Palavras-chave: Otolith imaging; A contrario detection; Mathematical morphology.
Ano: 2006 URL: http://archimer.ifremer.fr/doc/2006/publication-1223.pdf
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