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PCR performance of a thermostable heterodimeric archaeal DNA polymerase ArchiMer
Killelea, Tom; Ralec, Celine; Bosse, Audrey; Henneke, Ghislaine.
DNA polymerases are versatile tools used in numerous important molecular biological core technologies like the ubiquitous polymerase chain reaction (PCR), cDNA cloning, genome sequencing, and nucleic acid based diagnostics. Taking into account the multiple DNA amplification techniques in use, different DNA polymerases must be optimized for each type of application. One of the current tendencies is to reengineer or to discover new DNA polymerases with increased performance and broadened substrate spectra. At present, there is a great demand for such enzymes in applications, e.g., forensics or paleogenomics. Current major limitations hinge on the inability of conventional PCR enzymes, such as Taq, to amplify degraded or low amounts of template DNA. Besides,...
Tipo: Text Palavras-chave: DNA polymerase; Archaea; Family D; PCR; Pyrococcus.
Ano: 2014 URL: http://archimer.ifremer.fr/doc/00193/30450/28871.pdf
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ADN polymérases et acides nucléiques endommagés chez les Archaea : maintenance génonique et Biotechnologies ArchiMer
Ralec, Celine.
Hyperthermophilic Archaea that thrive under harsh environments (elevated temperature, pH shifts, andionizing radiations) are supposed to be exposed to massive DNA damages. However, the mutations frequencies in hyperthermophilic Archaea are comparable with those of other microorganisms (1) indicating they are equipped with unique and efficient molecular mechanisms to ensure their genome integrity. DNA replication is an essential and conserved process among the three domains of life. DNA polymerases are central enzymes involved in the joining of deoxyribonucleoside 5′-triphosphates (dNTPs) to form the growing DNA chain. In Pyrococcus abyssi (Pab), two familiesDNA polymerases have been described as replicases, one family B (PabPol B) with structural diversity...
Tipo: Text Palavras-chave: ADN; Archéa; Polymérase; Pyrococcus.
Ano: 2013 URL: https://archimer.ifremer.fr/doc/00498/60952/64355.pdf
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La réplication de l'ADN chez l'euryarchaea Pyrococcus Abyssi : mise en place et dynamique du complexe ArchiMer
Rouillon, Christophe.
DNA replication occurs through a large protein complex assembly called replisome. An understanding of its structure and function requires its in vitro reassembly from individual subunits. In all living organisms, the elongation of a primed DNA template by DNA polymerase, with high processivity, requires the accessory protein DNA sliding clamp (PCNA) that is loaded onto DNA by the clamp loader (RF-C). Generally, the archaeal proteins involved in DNA replication are more similar to those of the higher organisms (Eukarya) rather than to those from Bacteria. This study have focussed on the PCNA loading mechanism and on the DNA synthesis in the hyperthermophilic Euryarchaea Pyrococcus abyssi. To investigate the importance of some protein-protein and...
Tipo: Text Palavras-chave: Pyrococcus; Archaea; DNA synthesis; Interaction; RP A; RF C; PCNA; DNA polymerase; DNA replication; Pyrococcus; Archée; Archaea; Synthese d'ADN; Interaction; RP A; RF C; PCNA; ADN polymerase; Replication de l'ADN.
Ano: 2006 URL: http://archimer.ifremer.fr/doc/2006/these-2461.pdf
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