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Riesgo por inundación asociada a eventos de precipitación extraordinaria en la subcuenca del río La Antigua, Veracruz. Colegio de Postgraduados
Larios Tlali, Hugo.
El objetivo del presente estudio fue aplicar el modelo de simulación hidráulica HEC-RAS para delimitar las zonas con riesgo a inundación en la subcuenca del río La Antigua, Ver., utilizando la metodología del Centro Nacional de Prevención de Desastres (CENAPRED) que considera la vulnerabilidad y el peligro de un sistema ante la ocurrencia de un fenómeno extremo perturbador. El modelo HEC-RAS usa ecuaciones diferenciales determinísticas que simulan el comportamiento y la dinámica de los niveles de agua en secciones transversales del cauce; su aplicación bajo condiciones de flujo no permanente y régimen mixto, permitió definir las áreas de inundación alcanzadas durante una avenida extraordinaria. Para la simulación hidráulica se construyeron hidrogramas...
Palavras-chave: Simulación hidráulica; Inundación; Hidrograma; Fenómenos hidrometeorológicos extremos; Calibración; Validación; Riesgo por inundación; Hydraulic simulation; Flood hydrograph; Extreme weather phenomena; Calibration; Validation; Flood risk; Hidrociencias; Maestría.
Ano: 2014 URL: http://hdl.handle.net/10521/2375
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Compuestos volátiles que median la interacción entre Anthonomus eugenii Cano y Capsicum annuum L. Colegio de Postgraduados
Velázquez González, Julio César.
Dado que el picudo del chile es el principal problema fitosanitario en el cultivo de Capsicum spp., y las medidas de control no han logrado mitigar de forma eficiente las poblaciones de este insecto, se estudiaron los siguientes objetivos con el fin de conocer las interacciones planta insecto. Primero se valido un método de recolecta de volátiles, el cual demostró ser eficiente bajo las diferentes variables analíticas estudiadas, con % de recobro de 90-100 y DER menores a 10%. En segundo lugar se evaluó el potencial atrayente de estructuras de la planta como flores, yemas, frutos en desarrollo y frutos comerciales, encontrando que machos prefieren en primer lugar flores y después yemas, y las hembras en su primera opción eligieron yemas y después flores....
Palavras-chave: Validación; Feromona; Capsicum; Sensilla; Cromatografía; Validation; Pheromone; Chromatography; Entomología y Acarología; Doctorado.
Ano: 2011 URL: http://hdl.handle.net/10521/557
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Compuestos volátiles que median la interacción entre Anthonomus eugenii Cano y Capsicum annuum L. Colegio de Postgraduados
Velázquez González, Julio César.
Dado que el picudo del chile es el principal problema fitosanitario en el cultivo de Capsicum spp., y las medidas de control no han logrado mitigar de forma eficiente las poblaciones de este insecto, se estudiaron los siguientes objetivos con el fin de conocer las interacciones planta insecto. Primero se valido un método de recolecta de volátiles, el cual demostró ser eficiente bajo las diferentes variables analíticas estudiadas, con % de recobro de 90-100 y DER menores a 10%. En segundo lugar se evaluó el potencial atrayente de estructuras de la planta como flores, yemas, frutos en desarrollo y frutos comerciales, encontrando que machos prefieren en primer lugar flores y después yemas, y las hembras en su primera opción eligieron yemas y después flores....
Palavras-chave: Validación; Feromona; Capsicum; Sensilla; Cromatografía; Validation; Pheromone; Chromatography; Entomología y Acarología; Doctorado.
Ano: 2011 URL: http://hdl.handle.net/10521/557
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Estandarización y validación de la técnica de PCR para el diagnóstico de Salmonella typhimurium en carne de cerdo, res y pollo. Colegio de Postgraduados
Rosas Espejel, Monzerrat.
El estudio tuvo como objetivo estandarizar y validar la técnica de Reacción en Cadena de la Polimerasa (PCR) para la detección de Salmonella typhimurium (St) en carne de cerdo, res y pollo, optimizando el tiempo y la sensibilidad con relación al método microbiológico; además se realizó el diagnóstico en estos tipos de carnes para evaluar su calidad microbiológica en la Ciudad de Texcoco. Un total de 60 muestras de carne (20 de cerdo, 20 de res y 20 de pollo) de 250 g fueron recolectadas en puntos de venta de la Ciudad de Texcoco. Las muestras recolectadas procedían de carnicerías, tianguis y supermercados. Se evaluó la sensibilidad y especificidad de la PCR para detectar St; asimismo, se validó esta técnica en relación al método microbiológico con base al...
Palavras-chave: Salmonella typhimurium; PCR; Carne; Validación; Meat; Validation; Ganadería; Maestría.
Ano: 2014 URL: http://hdl.handle.net/10521/2388
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Is Validation of Indigenous Ecological Knowledge a Disrespectful Process? A Case Study of Traditional Fishing Poisons and Invasive Fish Management from the Wet Tropics, Australia Ecology and Society
Gratani, Monica; School of Earth and Environmental Sciences, James Cook University; monica.gratani@jcu.edu.au; Butler, James R. A. ; CSIRO Ecosystem Sciences, EcoSciences Precinct ; james.butler@csiro.au; Royee, Frank; Malanbarra Yidinji Elder;; Valentine, Peter; School of Earth and Environmental Sciences, James Cook University;; Burrows, Damien; Australian Centre for Tropical Freshwater Research, James Cook University;; Canendo, Warren I.; CSIRO Sustainable Ecosystems and Sustainable Agriculture Flagship, ATFI;; Anderson, Alex S; Centre for Tropical Biodiversity and Climate Change, School of Marine and Tropical Biology, James Cook University; alexander.anderson@my.jcu.edu.au.
Tipo: Peer-Reviewed Reports Palavras-chave: Comanagement; Fishing poisons; Indigenous ecological knowledge; Invasive fish; Knowledge socialization; Livelihoods; Poisonous plants; Social-ecological systems: tilapia; Traditional ecological knowledge; Validation.
Ano: 2011
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Assessment of molecular recognition element for the quantification of human epidermal growth factor using surface plasmon resonance Electron. J. Biotechnol.
Rosti,Ira Amira; Ramanan,Ramakrishnan Nagasundara; Ling,Tau Chuan; Ariff,Arbakariya B.
Background: A method for the selection of suitable molecular recognition element (MRE) for the quantification of human epidermal growth factor (hEGF) using surface plasmon resonance (SPR) is presented. Two types of hEGF antibody, monoclonal and polyclonal, were immobilized on the surface of chip and validated for its characteristics and performance in the quantification of hEGF. Validation of this analytical procedure was to demonstrate the stability and suitability of antibody for the quantification of target protein. Results: Specificity, accuracy and precision for all samples were within acceptable limit for both antibodies. The affinity and kinetic constant of antibodies-hEGF binding were evaluated using a 1:1 Langmuir interaction model. The model...
Tipo: Journal article Palavras-chave: Antibody; BIAcore; Biosensors; Epidermal growth factor; Validation.
Ano: 2013 URL: http://www.scielo.cl/scielo.php?script=sci_arttext&pid=S0717-34582013000600015
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Hydrological simulation using SWAT model in headwater basin in Southeast Brazil REA
Pereira,Donizete dos R.; Martinez,Mauro A.; Almeida,André Q. de; Pruski,Fernando F.; Silva,Demetrius D. da; Zonta,João H..
Hydrological models are important tools that have been used in water resource planning and management. Thus, the aim of this work was to calibrate and validate in a daily time scale, the SWAT model (Soil and Water Assessment Tool) to the watershed of the Galo creek , located in Espírito Santo State. To conduct the study we used georeferenced maps of relief, soil type and use, in addition to historical daily time series of basin climate and flow. In modeling were used time series corresponding to the periods Jan 1, 1995 to Dec 31, 2000 and Jan 1, 2001 to Dec 20, 2003 for calibration and validation, respectively. Model performance evaluation was done using the Nash-Sutcliffe coefficient (E NS) and the percentage of bias (P BIAS). SWAT evaluation was also...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Hydrological modeling; SWAT; Calibration; Validation.
Ano: 2014 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0100-69162014000400018
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VALIDATION OF SATELLITE DERIVED LHF USING COARE_3.0 SCHEME AND TIME SERIES DATA OVER NORTH-EAST INDIAN OCEAN Gayana
Muraleedharan,P.M.; Pankajakshan,T.; Sathe,P.V..
Time series measurement of surface meteorological parameters using an Autonomous Weather Station and Moored Buoy positioned at 10.5 N and 72 E from July to November 2000 are used to compute latent heat flux (LHF) using COARE_3.0 algorithm for validating Special Sensor Microwave Imager (SSMI) derived LHF data. Mean positive and negative biases are observed between satellite and sea truth derived LHF estimates for summer (July to Sept) and inter-monsoon (Oct-Nov.) seasons respectively. Comparison during summer season exhibits very high correlation ( 75%) and is increasing progressively with longer climatologies. Satellite underestimates higher LHF values during summer while it overestimates lower LHF values in inter-monsoon season. Root Mean Square Deviation...
Tipo: Journal article Palavras-chave: Validation; Autonomous Weather Station; COARE_3.0 Scheme; Latent Heat Flux; Summer Monsoon.
Ano: 2004 URL: http://www.scielo.cl/scielo.php?script=sci_arttext&pid=S0717-65382004000300019
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AN INTERACTIVE SOFTWARE PACKAGE FOR VALIDATING SATELLITE DATA Gayana
Muraleedharan,P.M.; Pankajakshan,T..
Earth observation satellite launched in the last three decades have made vital contributions to the understanding of the planet. The earth system consisting of land, oceans and atmosphere is linked together by a number of complicated processes. Potential of microwave sensors in studying the boundary layer dynamics of the ocean-atmosphere system is well documented. Technology has revolutionized the application of such sensors and several missions are planned to take off in near future for meeting specific objectives. Launching of such sensors need to be followed by an extensive validation campaign for providing accurate and reliable information to the users. A PC-based interactive system has been developed and presented here for validating satellite mounted...
Tipo: Journal article Palavras-chave: Validation; Microwave sensor; Autocorrelation; Sea surface temperature; Wind speed; Columnar water vapor.
Ano: 2004 URL: http://www.scielo.cl/scielo.php?script=sci_arttext&pid=S0717-65382004000300018
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Sensitivity, advantages, limitations, and clinical utility of targeted next-generation sequencing panels for the diagnosis of selected lysosomal storage disorders Genet. Mol. Biol.
Málaga,Diana Rojas; Brusius-Facchin,Ana Carolina; Siebert,Marina; Pasqualim,Gabriela; Saraiva-Pereira,Maria Luiza; Souza,Carolina F.M de; Schwartz,Ida V.D.; Matte,Ursula; Giugliani,Roberto.
Abstract Lysosomal storage disorders (LSDs) constitute a heterogeneous group of approximately 50 genetic disorders. LSDs diagnosis is challenging due to variability in phenotype penetrance, similar clinical manifestations, and a high allelic heterogeneity. A powerful tool for the diagnosis of the disease could reduce the “diagnostic odyssey” for affected families, leading to an appropriate genetic counseling and a better outcome for current therapies, since enzyme replacement therapies have been approved in Brazil for Gaucher, Fabry, and Pompe diseases, and are under development for Niemann-Pick Type B. However, application of next-generation sequencing (NGS) technology in the clinical diagnostic setting requires a previous validation phase. Here, we...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Ion Torrent; Molecular diagnostics; Next-generation sequencing; Lysosomal storage disorders; Validation.
Ano: 2019 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572019000200197
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Application du modèle MARS-3D à la rade de Toulon. Comparaison à des données historiques ArchiMer
Tessier, Caroline.
Développé par le laboratoire DEL/AO à Brest et appliqué à la rade de Toulon, le modèle MARS-3D a été installé au laboratoire de Toulon. L'objectif est de mettre en route son application à Toulon et de contribuer à l'analyse en cours des résultats du modèle, en les· comparant aux mesures historiques. Dans ce rapport sont présentés les travaux faits pour réaliser ce double objectif: l'apprentissage du modèle dans sa conception et son utilisation, l'analyse des résultats et la comparaison avec des mesures ainsi qu'une simulation de traceurs. La comparaison du modèle avec les données a été réalisée sur la base des enregistrements faits en 1986-1987 en un point de mesure au centre de la grande rade. Or, l'emboîtement des modèles crée une contrainte sur le...
Tipo: Text Palavras-chave: Modèle; Tridimensionnel; Méditerranée; Hydrodynamique; Validation; Toulon.
Ano: 2001 URL: https://archimer.ifremer.fr/doc/00431/54248/59141.pdf
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GF-3 SAR Ocean Wind Retrieval: The First View and Preliminary Assessment ArchiMer
Wang, He; Yang, Jingsong; Mouche, Alexis; Shao, Weizeng; Zhu, Jianhua; Ren, Lin; Xie, Chunhua.
Gaofen-3 (GF-3) is the first Chinese civil C-band synthetic aperture radar (SAR) launched on 10 August 2016 by the China Academy of Space Technology (CAST), which operates in 12 imaging modes with a fine spatial resolution up to 1 m. As one of the primary users, the State Oceanic Administration (SOA) operationally processes GF-3 SAR Level-1 products into ocean surface wind vector and plans to officially release the near real-time SAR wind products in the near future. In this paper, the methodology of wind retrieval at C-band SAR is introduced and the first results of GF-3 SAR-derived winds are presented. In particular, the case of the coastal katabatic wind off the west coast of the U.S. captured by GF-3 is discussed. The preliminary accuracy assessment of...
Tipo: Text Palavras-chave: GF-3; Synthetic aperture radar (SAR); Ocean surface wind; Validation.
Ano: 2017 URL: http://archimer.ifremer.fr/doc/00396/50731/51435.pdf
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Validation of the TOPEX rain algorithm: Comparison with ground-based radar - art. no. 4038 ArchiMer
Mcmillan, A; Quartly, G; Srokosz, M; Tournadre, Jean.
[1] Recently developed algorithms have shown the potential recovery of rainfall information from spaceborne dual-frequency altimeters. Given the long mission achieved with TOPEX and the prospect of several other dual-frequency altimeters, we need to validate the altimetrically derived values so as to foster their integration with rain information from different sensors. Comparison with some alternative climatologies shows the bimonthly means for TOPEX to be low. Rather than apply a bulk correction we investigate individual rain events to understand the cause of TOPEX's underestimation. In this paper we compare TOPEX with near-simultaneous ground-based rain radars based at a number of locations, examining both the detection of rain and the quantitative...
Tipo: Text Palavras-chave: Attenuation; Validation; Rain; Satellite remote sensing; TOPEX.
Ano: 2002 URL: http://archimer.ifremer.fr/doc/2002/publication-695.pdf
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Short Technical Report for OsHV-1 detection and quantification by Real Time Polynerase Chain Reaction using OsHV-1 DNA polymerase sequence ArchiMer
Pepin, Jean-francois.
The present report completes a previously described procedure routinely used for the detection and quantification of OsHV-1 by Sybr green Real Time Polymerase Chain Reaction targeting the OsHV-1 DNA polymerase sequence. More particularly, this document brings information about analytical sensitivity, quantitation limit, assay precision, reproducibility of the technique.
Tipo: Text Palavras-chave: PCR quantitative HDP-F/R; Virus OsHV-1; Diagnostic; DNA polymerase; Validation; Real-Time PCR HDP-F/R; OsHV-1; Diagnostic; DNA polymerase; Validation.
Ano: 2013 URL: http://archimer.ifremer.fr/doc/00137/24814/22900.pdf
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Modèle CROCO. Coastal and Regional Ocean Community model. Mise en oeuvre et performances pour les configurations côtières ArchiMer
Heyraud, Catherine.
Les performances du modèle communautaire CROCO sont évaluées grâce à un jeu de données in-situ complet (courant, hauteur d’eau, température, salinité) et comparées à celles du modèle MARS-3D. Il apparaît que les modèles ont un comportement hydro-dynamique proche avec des divergences liées au coeur numérique de CROCO (schéma temporel, schéma d’advection). A ce stade, ces divergences n’apparaissent pas discriminantes pour CROCO.
Tipo: Text Palavras-chave: CROCO; MARS; Hydrodynamique; Validation.
Ano: 2018 URL: https://archimer.ifremer.fr/doc/00470/58158/60657.pdf
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Age estimation in common sole Solea solea larvae: validation of daily increments and evaluation of a pattern recognition technique ArchiMer
Lagardere, Françoise; Troadec, Herve.
Close similarities have been found between the otoliths of sea-caught and laboratory-reared larvae of the common sole Solea solea (L.), given appropriate temperatures and nourishment of the latter. But from hatching to mouth formation. and during metamorphosis, sole otoliths have proven difficult to read because the increments may be less regular and low contrast. In this study, the growth increments in otoliths of larvae reared at 12 degrees C were counted by light microscopy to test the hypothesis of daily deposition, with some results verified using scanning electron microscopy (SEM), and by image analysis in order to compare the reliability of the 2 methods in age estimation. Age was first estimated (in days posthatch) from light micrographs of whole...
Tipo: Text Palavras-chave: Larval sole; Solea solea; Otolith; Daily increment; Validation; Image analysis.
Ano: 1997 URL: http://archimer.ifremer.fr/doc/00337/44785/44488.pdf
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A Multivariate Regression Approach to Adjust AATSR Sea Surface Temperature to In Situ Measurements ArchiMer
Tandeo, Pierre; Autret, Emmanuelle; Piolle, Jean-francois; Tournadre, Jean; Ailliot, Pierre.
The Advanced Along-Track Scanning Radiometer (AATSR) onboard Envisat is designed to provide very accurate measurements of sea surface temperature (SST). Using colocated in situ drifting buoys, a dynamical matchup database (MDB) is used to assess the AATSR-derived SST products more precisely. SST biases are then computed. Currently, Medspiration AATSR SST biases are discrete values and can introduce artificial discontinuities in AATSR level-2 SST fields. The new AATSR SST biases presented in this letter are continuous. They are computed, for nighttime and best proximity confidence data, by linear regression with different MDB covariables (wind speed, latitude, aerosol optical depth, etc.). As found, the difference between dual-view and nadir-only SST...
Tipo: Text Palavras-chave: Validation; Sea surface temperature (SST); Remote sensing; Advanced Along Track Scanning Radiometer (AATSR).
Ano: 2009 URL: http://archimer.ifremer.fr/doc/2009/publication-6135.pdf
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Performance of viruses and bacteriophages for fecal source determination in a multi-laboratory, comparative study ArchiMer
Harwood, Valerie J.; Boehm, Alexandria B.; Sassoubre, Lauren M.; Vijayavel, Kannappan; Stewart, Jill R.; Fong, Theng-theng; Caprais, Marie-paule; Converse, Reagan R.; Diston, David; Ebdon, James; Fuhrman, Jed A.; Gourmelon, Michele; Gentry-shields, Jennifer; Griffith, John F.; Kashian, Donna R.; Noble, Rachel T.; Taylor, Huw; Wicki, Melanie.
An inter-laboratory study of the accuracy of microbial source tracking (MST) methods was conducted using challenge fecal and sewage samples that were spiked into artificial freshwater and provided as unknowns (blind test samples) to the laboratories. The results of the Source Identification Protocol Project (SIPP) are presented in a series of papers that cover 41 MST methods. This contribution details the results of the virus and bacteriophage methods targeting human fecal or sewage contamination. Human viruses used as source identifiers included adenoviruses (HAdV), enteroviruses (EV), norovirus Groups I and II (NoVI and NoVII), and polyomaviruses (HPyVs). Bacteriophages were also employed, including somatic coliphages and F-specific RNA bacteriophages...
Tipo: Text Palavras-chave: Virus; Bacteriophage; Water quality; Fecal pollution; Validation.
Ano: 2013 URL: http://archimer.ifremer.fr/doc/00171/28197/27786.pdf
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Selection and validation of a complex fishery model using an uncertainty hierarchy ArchiMer
Lehuta, Sigrid; Petitgas, Pierre; Mahevas, Stephanie; Huret, Martin; Vermard, Youen; Uriarte, Andres; Record, Nicholas R..
Assessing the validity of a model is essential for its credibility especially when the model is used as decision making tool. Complex dynamic fishery models are recommended to investigate the functioning of fisheries and to assess the impact of management strategies, particularly spatial fishing regulations. However, their use is limited due to the difficulty and computational cost of parameterizing and gaining confidence, particularly for parameter rich models. These difficulties are compounded by uncertainty regarding parameter values, many of which are often taken from literature or estimated indirectly. Here we propose a methodology to improve confidence and understanding in the model, easily transferable to any complex model. The approach combines...
Tipo: Text Palavras-chave: Bay of Biscay anchovy; Dynamic fishery model; Model selection; Uncertainty; Validation.
Ano: 2013 URL: http://archimer.ifremer.fr/doc/00148/25965/24150.pdf
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Modélisation hydrodynamique de la dispersion à court terme dans une mer macrotidale: validation par des mesures à haute résolution de radiotraceurs solubles ArchiMer
Bailly Du Bois, Pascal; Dumas, Franck.
DISPRO project aims to validate hydrodynamic models dispersion parameters by field data for the short-term (hours to week) and short distances (100 meters to 30 km). This project is based on a 2D instantaneous currents model with a mesh size of 110 m, coupled with high frequency field data collected in the release plume. At this step of the works, measurements confirm the reliability of the model during six hours following a release. This validation made possible developpement of models with known incertitude to simulate dispersion of dissolved substances in realistic conditions for normal or accidental situations in macrotidal seas.
Tipo: Text Palavras-chave: Validation; Tritium; Dispersion; North sea; Hydrodynamic model; Validation; Tritium; Dispersion; Manche; Modèle.
Ano: 2004 URL: http://archimer.ifremer.fr/doc/2004/acte-564.pdf
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