Home Itens selecionados Provedores de dados OAI Créditos Sobre Ajuda

			Busca avançada
	Provedor de dados BJID (1) BJM (1) Genet. Mol. Biol. (1) Autor Araújo Silva Jr,Wilson (1) Cigliano,Riccardo Aiese (1) D’Alessandro,Enrico (1) Giosa,Domenico (1) Giuffrè,Letterio (1) Lin,Johnson (1) Peronni,Kamila (1) Roberto Bollela,Valdes (1) Rodrigues Plaça,Jessica (1) Romeo,Orazio (1) Sapienza,Irene (1) Sharma,Vikas (1) Silva Feliciano,Cinara (1) Zumbo,Alessandro (1) Mais... Palavra-chave Whole genome sequencing (3) Acinetobacter (1) Drug resistant tuberculosis (1) Drug susceptibility tests (1) Fitness genes (1) Nero Siciliano pig (1) Oil contaminated soil (1) Phenol degradation (1) SNPs discovery (1) Tuberculosis (1) Variant calling (1) Mais... Tipo do documento Info:eu-repo/semantics/other (2) Info:eu-repo/semantics/article (1) Ano 2019 (1) 2017 (1) 2016 (1) País Brazil (3) Idioma Inglês (3)		Ordenar por:  Relevância Autor Título Ano Registros recuperados: 3 Primeira ... 1 ... Última Whole genome SNPs discovery in Nero Siciliano pig Genet. Mol. Biol. D’Alessandro,Enrico; Giosa,Domenico; Sapienza,Irene; Giuffrè,Letterio; Cigliano,Riccardo Aiese; Romeo,Orazio; Zumbo,Alessandro. Abstract Autochthonous pig breeds represent an important genetic reserve to be utilized mainly for the production of typical products. To explore its genetic variability, here we present for the first time whole genome sequencing data and SNPs discovered in a male domestic Nero Siciliano pig compared to the last pig reference genome Sus scrofa11.1.A total of 346.8 million paired reads were generated by sequencing. After quality control, 99.03% of the reads were mapped to the reference genome, and over 11 million variants were detected.Additionally, we evaluated sequence diversity in 21 fitness-related loci selected based on their biological function and/or their proximity to relevant QTLs. We focused on genes that have been related to environmental... Tipo: Info:eu-repo/semantics/other Palavras-chave: Nero Siciliano pig; Whole genome sequencing; Variant calling; SNPs discovery; Fitness genes. Ano: 2019 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572019000400594 Evaluation of resistance acquisition during tuberculosis treatment using whole genome sequencing BJID Silva Feliciano,Cinara; Rodrigues Plaça,Jessica; Peronni,Kamila; Araújo Silva Jr,Wilson; Roberto Bollela,Valdes. Abstract Tuberculosis (TB) is still considered a major global public health problem in the world and there is a concern about the worldwide increase of drug-resistance (DR). This paper describes the analysis of three Mycobacterium tuberculosis isolates from a single patient collected over a long treatment period of time. DR was initially investigated through phenotypic testing, followed by line probe assays (LPAs) and whole genome sequencing (WGS). It presents an intriguing situation where a multidrug-resistant (MDR-) TB case was diagnosed and treated based only on late phenotypic drug susceptibility testing of isolate 1. During the treatment, another two isolates were cultivated: isolate 2, nine months after starting MDR-TB treatment; and isolate 3,... Tipo: Info:eu-repo/semantics/other Palavras-chave: Tuberculosis; Drug resistant tuberculosis; Drug susceptibility tests; Whole genome sequencing. Ano: 2016 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1413-86702016000300012 Draft genome sequence of phenol degrading Acinetobacter sp. Strain V2, isolated from oil contaminated soil BJM Sharma,Vikas; Lin,Johnson. Abstract We report here the draft genome sequence of Acinetobacter sp. Strain V2 isolated from the oil contaminated soil collected from ENGEN, Amanzimtoti, South Africa. Degradation of phenolic compounds such as phenol, toluene, aniline etc. at 400 ppm in 24 h and oil degrading capability makes this organism an efficient multifunctional bioremediator. Genome sequencing of Acinetobacter spp. V2 was carried out on Illumina HiSeq 2000 platform (performed by the Beijing Genomics Institute [BGI], Shenzhen, China). The data obtained revealed 643 contigs with genome size of 4.0 Mb and G + C content of 38.59%. Tipo: Info:eu-repo/semantics/article Palavras-chave: Acinetobacter; Phenol degradation; Whole genome sequencing; Oil contaminated soil. Ano: 2017 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822017000200189 Registros recuperados: 3 Primeira ... 1 ... Última

Empresa Brasileira de Pesquisa Agropecuária - Embrapa Todos os direitos reservados, conforme Lei n° 9.610 Política de Privacidade Área restrita		Embrapa Parque Estação Biológica - PqEB s/n° Brasília, DF - Brasil - CEP 70770-901 Fone: (61) 3448-4433 - Fax: (61) 3448-4890 / 3448-4891 SAC: https://www.embrapa.br/fale-conosco