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| Howell, Kerry L.; Davies, Jaime S.; Allcock, A. Louise; Braga-henriques, Andreia; Buhl-mortensen, Pål; Carreiro-silva, Marina; Dominguez-carrió, Carlos; Durden, Jennifer M.; Foster, Nicola L.; Game, Chloe A.; Hitchin, Becky; Horton, Tammy; Hosking, Brett; Jones, Daniel Ob; Mah, Christopher; Laguionie Marchais, Claire; Menot, Lenaick; Morato, Telmo; Pearman, Tabitha R. R.; Piechaud, Nils; Ross, Rebecca E.; Ruhl, Henry A.; Saeedi, Hanieh; Stefanoudis, Paris V.; Taranto, Gerald H.; Thompson, Michael B.; Taylor, James R.; Tyler, Paul; Vad, Johanne; Victorero, Lissette; Vieira, Rui P.; Woodall, Lucy C.; Xavier, Joana R.; Wagner, Daniel. |
| Video and image data are regularly used in the field of benthic ecology to document biodiversity. However, their use is subject to a number of challenges, principally the identification of taxa within the images without associated physical specimens. The challenge of applying traditional taxonomic keys to the identification of fauna from images has led to the development of personal, group, or institution level reference image catalogues of operational taxonomic units (OTUs) or morphospecies. Lack of standardisation among these reference catalogues has led to problems with observer bias and the inability to combine datasets across studies. In addition, lack of a common reference standard is stifling efforts in the application of artificial intelligence to... |
| Tipo: Text |
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| Ano: 2019 |
URL: https://archimer.ifremer.fr/doc/00602/71408/69862.pdf |
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| Kazanidis, Georgios; Orejas, Covadonga; Borja, Angel; Kenchington, Ellen; Henry, Lea-anne; Callery, Oisín; Carreiro-silva, Marina; Egilsdottir, Hronn; Giacomello, Eva; Grehan, Anthony; Menot, Lenaick; Morato, Telmo; Ragnarsson, Stefán Áki; Rueda, José Luis; Stirling, David; Stratmann, Tanja; Van Oevelen, Dick; Palialexis, Andreas; Johnson, David; Roberts, J Murray. |
| The deep sea is the largest biome on Earth but the least explored. Our knowledge of it comes from scattered sources spanning different spatial and temporal scales. Implementation of marine policies like the European Union’s Marine Strategy Framework Directive (MSFD) and support for Blue Growth in the deep sea are therefore hindered by lack of data. Integrated assessments of environmental status require tools to work with different and disaggregated datasets (e.g. density of deep-sea habitat-forming species, body-size distribution of commercial fishes, intensity of bottom trawling) across spatial and temporal scales. A feasibility study was conducted as part of the four-year ATLAS project to assess the effectiveness of the open-access Nested Environmental... |
| Tipo: Text |
Palavras-chave: Deep-sea environmental status; Vulnerable Marine Ecosystems; Indicators; Baselines; Marine Strategy Framework Directive; NEAT. |
| Ano: 2020 |
URL: https://archimer.ifremer.fr/doc/00651/76276/77241.pdf |
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| Puerta, Patricia; Johnson, Clare; Carreiro-silva, Marina; Henry, Lea-anne; Kenchington, Ellen; Morato, Telmo; Kazanidis, Georgios; Luis Rueda, Jose; Urra, Javier; Ross, Steve; Wei, Chih-lin; Manuel Gonzalez-irusta, Jose; Arnaud-haond, Sophie; Orejas, Covadonga. |
| Circulation patterns in the North Atlantic Ocean have changed and re-organized multiple times over millions of years, influencing the biodiversity, distribution, and connectivity patterns of deep-sea species and ecosystems. In this study, we review the effects of the water mass properties (temperature, salinity, food supply, carbonate chemistry, and oxygen) on deep-sea benthic megafauna (from species to community level) and discussed in future scenarios of climate change. We focus on the key oceanic controls on deep-sea megafauna biodiversity and biogeography patterns. We place particular attention on cold-water corals and sponges, as these are ecosystem-engineering organisms that constitute vulnerable marine ecosystems (VME) with high associated... |
| Tipo: Text |
Palavras-chave: North Atlantic; Deep-sea; Biodiversity; Biogeography; Water masses; Vulnerable marine ecosystems. |
| Ano: 2020 |
URL: https://archimer.ifremer.fr/doc/00628/74006/73330.pdf |
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| Morato, Telmo; Pham, Christopher K.; Fauconnet, Laurence; Taranto, Gerald H.; Chimienti, Giovanni; Cordes, Erik; Dominguez-carrio, Carlos; Munoz, Pablo Duran; Egilsdottir, Hronn; Gonzalez-irusta, Jose-manuel; Grehan, Anthony; Hebbeln, Dierk; Henry, Lea-anne; Kazanidis, Georgios; Kenchington, Ellen; Menot, Lenaick; Molodtsova, Tina N.; Orejas, Covadonga; Ramiro-sanchez, Berta; Ramos, Manuela; Roberts, J. Murray; Rodrigues, Luis; Ross, Steve W.; Rueda, Jose L.; Sacau, Mar; Stirling, David; Carreiro-silva, Marina. |
| Tipo: Text |
Palavras-chave: Deep-sea; Deep-sea fisheries; Marine protected areas; Area-based management tools; Sponges; Cold-water corals; Vulnerable marine ecosystems; Ecologically or biologically significant marine areas. |
| Ano: 2021 |
URL: https://archimer.ifremer.fr/doc/00689/80109/83167.pdf |
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| Carreiro-silva, Marina; Ocana, Oscar; Stankovic, David; Sampaio, Iris; Porteiro, Filipe M; Fabri, Marie-claire; Stefanni, Sergio. |
| Zoantharians are a group of cnidarians that are often found in association with marine invertebrates, including corals, in shallow and deep-sea environments. However, little is known about deep-sea zoantharian taxonomy, specificity and nature of their associations with their coral hosts. In this study, analyses of molecular data (mtDNA COI, 16S and 12S rDNA) coupled with ecological and morphological characteristics were used to examine zoantharian specimens associated with cold-water corals at depths between 110 and 800 m from seamounts and island slopes in the Azores region. The zoantharians examined were found living in association with stylasterids, antipatharians and octocorals. From the collected specimens, four new species were identified: (1)... |
| Tipo: Text |
Palavras-chave: Antipatharians; Gorgonians; Molecular taxonomy; Parasitic; Phylogeny; Stylasterids; Zoantharia. |
| Ano: 2017 |
URL: https://archimer.ifremer.fr/doc/00377/48818/49216.pdf |
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