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Registros recuperados: 22
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Assessment of the contributions of glycolysis and the pentose phosphate pathway to glucose respiration in ectomycorrhizas and non-mycorrhizal roots of spruce (Picea abies L. Karsten) Inra
Bilger, I.; Guillot, V.; Martin, F.; Le Tacon, F..
Tipo: Journal Article Palavras-chave: NUTRITION CARBONEE; GLUCOSE.
Ano: 1989 URL: http://www.prodinra.inra.fr/prodinra/pinra/doc.xsp?id=PUB9000028012017106&uri=/notices/prodinra1/2007/07/
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Development and validation of an oligonucleotide microarray to characterise ectomycorrhizal fungal communities Inra
Reich, M.; Kohler, A.; Martin, F.; Buee, M..
Background: In forest ecosystems, communities of ectomycorrhizal fungi (ECM) are influenced by several biotic and abiotic factors. To understand their underlying dynamics, ECM communities have been surveyed with ribosomal DNA-based sequencing methods. However, most identification methods are both time-consuming and limited by the number of samples that can be treated in a realistic time frame. As a result of ongoing implementation, the array technique has gained throughput capacity in terms of the number of samples and the capacity for parallel identification of several species. Thus far, although phylochips (microarrays that are used to detect species) have been mostly developed to trace bacterial communities or groups of specific fungi, no phylochip has...
Tipo: Journal Article Palavras-chave: FINE-SCALE DISTRIBUTION; IDENTIFICATION; FOREST; ARRAY; HOST; SOIL; BASIDIOMYCOTA; SPECIFICITY; DIVERSITY; PATHOGENS.
Ano: 2009 URL: http://www.prodinra.inra.fr/prodinra/pinra/doc.xsp?id=PROD2010b686b787&uri=/notices/prodinra1/2010/10/
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Diversity of ectomycorrhizal symbionts in a disturbed Pinus halepensis plantation in the Mediterranean region Inra
El Karkouri, K.; Martin, F.; Mousain, D..
Diversité ectomycorhizienne dans une plantation à Pinus halepensis. La diversité génétique des ectomycorhizes de plants deP. halepensis a été examinée une année et demie après introduction dans un site incendié de Rieucoulon (Hérault, France). Cette diversité a étécaractérisée à l’aide du polymorphisme de fragments de restriction (RFLP) et du séquençage de l’espaceur interne transcrit (ITS) de l’ADNribosomal nucléaire. Trois traitements ont été examinés : des plants témoins, des plants mycorhizés avec Suillus collinitus et des plants enrégénération naturelle. Au total, 461 ectomycorhizes ont été soumises au typage moléculaire. Douze ribotypes d’ITS ont été détectés. S.collinitus (ribotype 1) est l’espèce dominante (45,8–59,7 %) dans les trois traitements...
Tipo: Journal Article Palavras-chave: DIVERSITE DES ECTOMYCORHIZES PLANTATION; ECTOMYCORRHIZAL DIVERSITY; PCR RFLP SEQUENCING; RDNA (ITS).
Ano: 2004 URL: http://www.prodinra.inra.fr/prodinra/pinra/doc.xsp?id=PROD20074c46726a&uri=/notices/prodinra1/2009/12/
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Diversity of ectomycorrhizal symbionts in a disturbed Pinus halepensis plantation in the Mediterranean region Inra
El Karkouri, K.; Martin, F.; Mousain, D..
Tipo: Journal Article Palavras-chave: DIVERSITE DES ECTOMYCORHIZES; RFLP; ADN RIBOSOMIQUE; REGION MEDITERRANEENNE; ECTOMYCORHIZE.
Ano: 2004 URL: http://www.prodinra.inra.fr/prodinra/pinra/doc.xsp?id=PUB0500025269107597&uri=/notices/prodinra1/2009/12/
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Fungi have three tetraspanin families with distinct functions Inra
Lambou, K; Tharreau, D.; Kohler, A.; Sirven, C; Marguerettaz, M; Barbisan, C; Sexton, A; Kellner, E; Martin, F.; Howlett, B; Orbach, M; Lebrun, MH.
Background: Tetraspanins are small membrane proteins that belong to a superfamily encompassing 33 members in human andmouse. These proteins act as organizers of membrane-signalling complexes. So far only two tetraspanin families have beenidentified in fungi. These are Pls1, which is required for pathogenicity of the plant pathogenic ascomycetes, Magnaporthe grisea,Botrytis cinerea and Colletotrichum lindemuthianum, and Tsp2, whose function is unknown. In this report, we describe a third familyof tetraspanins (Tsp3) and a new family of tetraspanin-like proteins (Tpl1) in fungi. We also describe expression of some of thesegenes in M. grisea and a basidiomycete, Laccaria bicolor, and also their functional analysis in M. grisea. Results: The exhaustive search...
Tipo: Journal Article Palavras-chave: BASIDIOMYCETES; ASCOMYCETES; COPRINUS CINEREUS; LACCARIA BICOLOR; MAGNAPORTHE GRISEA; PROTEINE MEMBRANAIRE; TETRASPANINE; PATHOGENIE; POUVOIR PATHOGENE; INFECTION RICE; BARLEY; GENE EXPRESSION; MYCELIUM; PATHOGENICITY; PLANT PATHOGENIC FUNGI; SURFACE PROTEINS; TRANSCRIPTION; DNA TRANSCRIPTION; MEMBRANE PROTEINS.
Ano: 2008 URL: http://www.prodinra.inra.fr/prodinra/pinra/doc.xsp?id=PROD20101f8edf6&uri=/notices/prodinra1/2010/11/
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Gene transcription in Lactarius quietus-Quercus petraea ectomycorrhizas from a forest soil Inra
Courty, P.E.; Poletto, M; Duchaussoy, F.; Buee, M.; Garbaye, J.; Martin, F..
Extracting fungal mRNA from ectomycorrhizas (ECMs) and forest soil samples for monitoring in situ metabolic activities is a significant challenge when studying the role of ECMs in biogeochemical cycles. A robust, simple, rapid, and effective method was developed for extracting RNA from rhizospheric soil and ECMs by adapting previous grinding and lysis methods. The quality and yield of the extracted RNA were sufficient to be used for reverse transcription. RNA extracted from ECMs of Lactarius quietus in a 100-year-old oak stand was used to construct a cDNA library and sequence expressed sequence tags. The transcripts of many genes involved in primary metabolism and in the degradation of organic matter were found. The transcription levels of four...
Tipo: Journal Article Palavras-chave: ECTOMYCORHIZE AMINO ACIDS; ECTOMYCORRHIZAS; FOREST SOILS; GENE EXPRESSION; GLUTAMATE-AMMONIA LIGASE; METABOLISM; MYCORRHIZAL FUNGI; N-ACETYL-BETA-GLUCOSAMINIDASE; RHIZOSPHERE; RNA; SOIL TYPES; BETA-N-ACETYLGLUCOSAMINIDASE; DNA TRANSCRIPTION; GLUTAMINE SYNTHETASE; RIBONUCLEIC ACID; TYROSINASE.
Ano: 2008 URL: http://www.prodinra.inra.fr/prodinra/pinra/doc.xsp?id=PROD2010e4344c33&uri=/notices/prodinra1/2010/11/
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Genome-wide identification of NBS resistance genes in Populus trichocarpa Inra
Kohler, A.; Rinaldi, C.; Duplessis, S.; Baucher, M.; Geelen, D.; Duchaussoy, F.; Meyers, BC; Boerjan, W.; Martin, F..
As the largest class of disease resistance R genes, the genes encoding nucleotide binding site and leucine-rich repeat proteins (“NBS-LRR genes”) play a critical role in defending plants from a multitude of pathogens and pests. The diversity of NBS-LRR genes was examined in the Populus trichocarpa draft genome sequence. The NBS class of genes in this perennial tree is large and diverse, comprised of ∼400 genes, at least twice the complement of Arabidopsis. The NBS family can be divided into multiple subfamilies with distinct domain organizations. It includes 119 Coiled-Coil-NBS-LRR genes, 64 TIR-NBS-LRR genes, 34 BED-finger-NBS-LRR, and both truncated and unusual NBS- and NBS-LRR-containing genes. The transcripts of only 34 NBS-LRR genes were detected in...
Tipo: Journal Article Palavras-chave: Populus; NBS-LRR; Resistance.
Ano: 2008 URL: http://www.prodinra.inra.fr/prodinra/pinra/doc.xsp?id=PROD2010b08a4238&uri=/notices/prodinra1/2010/10/
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Identification of genes differentially expressed in extraradical mycelium and ectomycorrhizal roots during Paxillus involutus-Betula pendula ectomycorrhizal symbiosis Inra
Morel, M.; Jacob, C.; Kohler, A.; Johansson, T.; Martin, F.; Chalot, M.; Brun, A..
The development of ectomycorrhizal symbiosis leads to drastic changes in gene expression in both partners. However, little is known about the spatial regulation of symbiosis-regulated genes. Using cDNA array profiling, we compared the levels of expression of fungal genes corresponding to approximately 1,200 expressed sequenced tags in the ectomycorrhizal root tips (ECM) and the connected extraradical mycelium (EM) for the Paxillus involutus-Betula pendula ectomycorrhizal association grown on peat in a microcosm system. Sixty-five unique genes were found to be differentially expressed in these two fungal compartments. In ECM, a gene coding for a putative phosphatidylserine decarboxylase (Psd) was up-regulated by 24-fold, while genes coding for urea (Dur3)...
Tipo: Journal Article Palavras-chave: EXPRESSION DES GENES; ECTOMYCORHIZE; MYCELIUM; SYMBIOSE ECTOMYCORHIZIENNE; PUCE A ADN PAXILLUS INVOLUTUS; BETULA PENDULA.
Ano: 2005 URL: http://www.prodinra.inra.fr/prodinra/pinra/doc.xsp?id=PROD2007b15a99dd&uri=/notices/prodinra1/2007/07/
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Impact of oxidoreduction potential and of gas bubbling on rheological properties of non-fat yoghurt Inra
Martin, F.; Cayot, N.; Vergoignan, C.; Journaux, L.; Gevais, P.; Cachon, R..
The aim of this work was to study the effect of different gaseous conditions on the physico-chemical properties of yoghurt. Four conditions of oxidoreduction potential (Eh7), +433 mV (milk gassed with air), +405 mV (ungassed milk), +283 mV (milk gassed with N2) and −349 mV (milk gassed with N2–H2) were applied to milk. The rheological properties and microstructure of these yoghurts were determined by measuring apparent viscosity, whey separation (WS) and using confocal laser scanning microscopy. Exopolysaccharide (EPS) production by lactic acid bacteria (LAB) was also studied, and production was increased for extreme Eh7 values: the highest values were obtained for air (oxidizing condition) and for N2–H2 (reducing condition). Yoghurts made under bubbled...
Tipo: Journal Article Palavras-chave: OXIREDUCTION POTENTIAL; LACTOBACILLUS DELBRUECKII SUBSP. BULGARIS; STREPTOCOCCUS THERMOPHILUS; NON-FAT YOGHURT; GEL STRUCTURE; EXOPLYSACCHARIDES.
Ano: 2010 URL: http://www.prodinra.inra.fr/prodinra/pinra/doc.xsp?id=PROD20109bdce69a&uri=/notices/prodinra1/2010/07/
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Intégration de la biodiversité des sols dans les réseaux de surveillance de la qualité des sols: exemple du programme pilote à l'échelle régionale, le RMQS BioDiv Inra
Cluzeau, D.; Peres, G.; Guernion, M.; Chaussod, R.; Cortet, J.; Fargette, M.; Martin, F.; Mateille, T.; Pernin, C.; Ponge, J.F.; Ruiz-Camacho, N.; Villenave, C.; Rougé, L.; Mercier, V.; Bellido, A.; Cannavacciulo, M.; Piron, D.; Arrouays, D.; Boulonne, L.; Jolivet, C.; Lavelle, P.; Velasquez, E.; Plantard, O.; Walter, C.; Foucaud-Lemercier, B.; Tico, S.; Giteau, J.L.; Bispo, A..
Le compartiment biologique des sols joue un rôle essentiel en délivrant des biens et des services écosystémiques clés, et il est impliqué directement et indirectement dans plusieurs fonctions du sol (cycle des nutriments, structure du sol, rétention de l'eau). La Commission Européenne a souligné l'intérêt de prendre en compte ce compartiment biologique. Elle a notamment demandé de développer des recherches sur ce thème dans les politiques de gestion des sols, en caractérisant la diversité spécifique et les fonctions biologiques de certains organismes du sol. Afin de répondre à de telles demandes et de réaliser un premier état de la biodiversité des sols à l'échelle régionale en relation avec les usages des sols et les paramètres pédoclimatiques, un...
Tipo: Journal Article Palavras-chave: BIODIVERSITE; ORGANISMES DU SOL; RESEAU DE SURVEILLANCE; QUALITE DU SOL; ECHELLE REGIONALE BRETAGNE; PROGRAMME DE RECHERCHE BIODIVERSITY; SOIL ORGANISMS; SOIL MONITORING; SOIL QUALITY; REGIONAL SCALE; BRITTANY; RESEARCH PROGRAM.;  .
Ano: 2009 URL: http://www.prodinra.inra.fr/prodinra/pinra/doc.xsp?id=PROD20105eaee49a&uri=/notices/prodinra1/2011/06/
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Le partage des responsabilités : les ONG, l'Etat et l'OMS face à la lèpre en Inde IRD
Martin, F..
Tipo: Text Palavras-chave: ONG; ETAT; POLITIQUE DE SANTE; ORGANISATION INTERNATIONALE; MALADIE; INFECTION; DEPISTAGE; CENTRE DE SANTE; GESTION; GOUVERNANCE; PARTENARIAT; RESPONSABILITE; LEPRE; TRITHERAPIE; ACTION HUMANITAIRE; ERADICATION.
Ano: 2005 URL: http://www.documentation.ird.fr/hor/fdi:010035575
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Molecular marquers in ecology of ectomycorrhizal fungi Inra
Martin, F.; Selosse, M.A.; di Batista, C.; Gherbi, H.; Delaruelle, C.; Vairelles, D.; Bouchard, D.; Le Tacon, F..
Les techniques de diagnostic moléculaire permettant d’identifier les différentes espèces de champignons ectomycorhiziens, ou les génotypes au sein de ces espèces, se sont considérablement développées au cours des dernières années. Plusieurs types de marqueurs moléculaires ont été mis au point pour identifier des souches de champignons ectomycorhiziens, aussi bien dans les pépinières forestières que dans les sites de reforestations et les écosystèmes naturels. Diverses méthodes, basées sur la PCR, sont utilisées pour caractériser le polymorphisme des ADN ribosomaux nucléaires et mitochondriaux de ces champignons. Ce polymorphisme a permis d’aborder la structuration et la dynamique des communautés et des populations naturelles de symbiotes...
Tipo: Journal Article Palavras-chave: LACCARIA; STRUCTURE DE LA POPULATION; ENZYME DE RESTRICTION.
Ano: 1998 URL: http://www.prodinra.inra.fr/prodinra/pinra/doc.xsp?id=PUB9900002220075020&uri=/notices/prodinra1/2007/08/
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Morphological and molecular analyses in Scleroderma species associated with some Caesalpinioid legumes, Dipterocarpaceae and Phyllanthaceae trees in southern Burkina Faso Inra
Sanon, K.B.; Bâ, A.M.; Delaruelle, C.; Duponnois, R.; Martin, F..
A combination of morphotypes, polymerasechain reaction/restriction fragment length polymorphism (PCR/RFLP) analyses and internal transcribed spacer (ITS) sequencing was used to investigate Scleroderma species that were collected from woodlands in Burkina Faso. We harvested 52 specimens from 20 sites during rainy seasons between 1997 and 2000. According to their morphological features, these specimens were initially characterised, and we then identified six species of Scleroderma. Two of the species were clearly determined as Scleroderma dictyosporum Pat. and S. verrucosum Pers. The four remaining species were characteristically described as (1) displaying big spores with spines up to 2 μm (Scleroderma sp1), (2) producing spores without ornamentation...
Tipo: Journal Article Palavras-chave: NUTRIENT-DEFICIENT SOIL; RIBOSOMAL DNA; ECTOMYCORRHIZAL FUNGI; PHYLOGENETIC ANALYSIS; SEQUENCE ALIGNMENT; GENETIC DIVERSITY; SEEDLINGS; AFZELIA; IDENTIFICATION; PISOLITHUS; SCLERODERMA; MORPHOLOGY; IDENTIFICATION; PCR/RFLP; ITS SEQUENCING; BURKINA FASO.
Ano: 2009 URL: http://www.prodinra.inra.fr/prodinra/pinra/doc.xsp?id=PROD20109dd18120&uri=/notices/prodinra1/2010/10/
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Obligate biotrophpy features unraveled by the genomic analysis of rust fungi Inra
Duplessis, S.; Cuomo, CA; Lin, YC; Aerts, A.; Tisserant, E.; Veneault-Fourrey, C.; Joly, DL; Hacquard, S.; Amselem, J.; Cantarel, B.l; Chin, R.; Coutinho, P.M.; Feau, N.; Field, M.; Frey, P.; Gelhaye, É.; Goldberg, J.; Grabherr, M.G.; Kodira, C.D.; Kohler, A.; Kues, U.; Lindquist, E.A.; Lucas, M; Mago, R.; Mauceli, E.; Morin, E.; Murat, C.; Pangilinan, J.L.; Park, R.; Pearson, M.; Quesneville, H.; Rouhier, N.; Sakthikumar, S.; Salamov, A.A.; Schmutz, J.; Selles, B.; Shapiro, H.; Tanguay, P.; Tuskan, G.A.; Henrissat, B.; Van de Peer, Y.; Rouze, P.; Ellis, J.G.; Dodds, P.N.; Schein, J.E.; Zhong, S.; Hamelin, R.C.; Grigoriev, I.V.; Szabo, L.J.; Martin, F..
Rust fungi are some of the most devastating pathogens of crop plants. They are obligate biotrophs, which extract nutrients only from living plant tissues and cannot grow apart from their hosts. Their lifestyle has slowed the dissection of molecular mechanisms underlying host invasion and avoidance or suppression of plant innate immunity. We sequenced the 101-Mb genome of Melampsora larici-populina, the causal agent of poplar leaf rust, and the 89-Mb genome of Puccinia graminis f. sp. tritici, the causal agent of wheat and barley stem rust. We then compared the 16,399 predicted proteins of M. larici-populina with the 17,773 predicted proteins of P. graminis f. sp tritici. Genomic features related to their obligate biotrophic lifestyle include expanded...
Tipo: Journal Article Palavras-chave: COMPARATIVE GENOMICS; PLANT PATHOGEN; BASIDIOMYCETE; EVOLUTION; RUST EVOLUTION.
Ano: 2011 URL: http://www.prodinra.inra.fr/prodinra/pinra/doc.xsp?id=PROD20117dba1845&uri=/notices/prodinra1/2011/06/
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Partitioning of assimilated nitrogen in beech (Fagus sylvatica) Inra
Martin, F.; Ben Driss Amraoui, M..
Tipo: Journal Article Palavras-chave: ASSIMILATION DE L'AZOTE.
Ano: 1989 URL: http://www.prodinra.inra.fr/prodinra/pinra/doc.xsp?id=PUB9000028030017124&uri=/notices/prodinra1/2007/07/
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Physiological and transcriptional responses of poplar to water deficit Inra
Kohler, A.; Bogeat, M.B.; Delaruelle, C.; Dreyer, E.; Guehl, J.M.; Martin, F..
The response of Populus trichocarpa x deltoides transcriptome to water-deficit stress wasassessed using experimental conditions that closely approximate stress development in the field.For dehydration treatment, 2-month-old cutting plantlets were grown for 19 days under restrictedirrigation to reach 35% of the transpiration rate of fully watered plants. At this stage, leaf waterpotential and shoot growth were not affected. In contrast, stomatal conductance andphotosynthesis of the fast growing leaf F3 were reduced by 90 and 60%, respectively. Osmoticadjustment was detected in this leaf – full turgor osmotic pressure was 20% higher than in controlplant –. Root growth was stimulated although relative water content was decreased. No osmoticadjustment was...
Tipo: Meeting Paper Palavras-chave: POPULUS; STRESS HYDRIQUE; SECHERESSE; DEFICIT HYDRIQUE; PHYSIOLOGIE; TRANSCRIPTOME; PROTEOME; POPULUS TRICHOCARPA X DELTOIDES CV BEAUPRE.
Ano: 2004 URL: http://www.prodinra.inra.fr/prodinra/pinra/doc.xsp?id=PROD2009269881a2&uri=/notices/prodinra1/2010/11/
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Pollinisation de l'artichaut (Cynara scolymus L.) par l'abeille domestique (Apis mellifera L.) en production de semences hybrides sous abris grillagés Inra
Morison, N.; Vaissière, B.; Martin, F.; Pécaut, P.; Cambon, G..
Tipo: Journal Article Palavras-chave: APIS MELLIFERA; APIDAE; HYMENOPTERA; EFFICACITE POLLINISATRICE; ABRI GRILLAGE; INSECTE UTILE; INSECTE SOCIAL; POLLINISATION ENTOMOPHILE; SEMENCE HYBRIDE; PRODUCTION DE SEMENCES; BUTINAGE; LIGNEE MALE; AKENE.
Ano: 2000 URL: http://www.prodinra.inra.fr/prodinra/pinra/doc.xsp?id=PUB0000024517080810&uri=/notices/prodinra1/2009/12/
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Survival after outplanting of the ectomycorrhizal fungus Laccaria bicolor S238N inoculated on Douglas fir (Pseudotsuga menziesii (Mirb.) Franco) cuttings Inra
di Battista, C.; Bouchard, D.; Martin, F.; Genere, B.; Amirault, J.M.; Le Tacon, F..
Tipo: Journal Article Palavras-chave: LACCARIA BICOLOR; BOUTURE; PEPINIERE FORESTIERE; SURVIE; REPIQUAGE.
Ano: 2002 URL: http://www.prodinra.inra.fr/prodinra/pinra/doc.xsp?id=PUB0400029101100682&uri=/notices/prodinra1/2009/12/
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The rhizosphere zoo: An overview of plant-associated communities of microorganisms, including phages, bacteria, archaea, and fungi, and of some of their structuring factors Inra
Buee, M.; De Boer, W.; Martin, F.; van Overbeek, L.; Jurkevitch, E.
Rhizosphere microorganisms have two faces, like Janus the Roman god of gates and doors who symbolizes changes and transitions, from one condition to another. One face looks at the plant root, the other sees the soil. The ears and the nose sense the other gods around and the mouths are wide open, swallowing as much as they can, and as described in Chapter 11, they also are busy talking. These faces may as well represent Hygieia (the Greek god of Health and Hygiene, the prevention of sickness and the continuation of good health) and Morta (the Roman god of death) for rhizosphere microbes can be beneficial, and promote plant growth and well being (Chapter 12) or detrimental, causing plant sickness and death (Chapter 13). It can be argued that many rhizosphere...
Tipo: Journal Article Palavras-chave: BURKHOLDERIA-CEPACIA COMPLEX; GRADIENT GEL-ELECTROPHORESIS; DISEASE-SUPPRESSIVE SOILS; FINE-SCALE DISTRIBUTION; FIELD-GROWN WHEAT; REAL-TIME PCR; ECTOMYCORRHIZAL FUNGI; MICROBIAL DIVERSITY; MYCORRHIZAL FUNGI; RIBOSOMAL-RNA.
Ano: 2009 URL: http://www.prodinra.inra.fr/prodinra/pinra/doc.xsp?id=PROD20102ca75b44&uri=/notices/prodinra1/2010/10/
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The role of swamp zones in the characterization and quantification of weathering processes in a humid-tropical environment (Nsimi site, Southern Cameroon) IRD
Oliva, P.; Viers, J.; Dupre, B.; Fortune, J.P.; Braun, Jean-Jacques; Dandurand, J.L.; Martin, F..
Tipo: Text Palavras-chave: SOL; ALTERATION CHIMIQUE; EROSION; BAS FOND; MARECAGE; EAU; PROFIL PEDOLOGIQUE; CARBONE ORGANIQUE; ANALYSE CHIMIQUE; ANALYSE MINERALOGIQUE; MODELISATION; PROGRAMME DE RECHERCHE.
Ano: 1998 URL: http://www.documentation.ird.fr/hor/fdi:010025602-061
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