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| Nieblas, Anne-elise; Drushka, Kyla; Reygondeau, Gabriel; Rossi, Vincent; Demarcq, Herve; Dubroca, Laurent; Bonhommeau, Sylvain. |
| The Mediterranean and Black Seas are semi-enclosed basins characterized by high environmental variability and growing anthropogenic pressure. This has led to an increasing need for a bioregionalization of the oceanic environment at local and regional scales that can be used for managerial applications as a geographical reference. We aim to identify biogeochemical subprovinces within this domain, and develop synthetic indices of the key oceanographic dynamics of each subprovince to quantify baselines from which to assess variability and change. To do this, we compile a data set of 101 months (2002-2010) of a variety of both "classical'' (i.e., sea surface temperature, surface chlorophyll-a, and bathymetry) and "mesoscale'' (i.e., eddy kinetic energy,... |
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| Ano: 2014 |
URL: http://archimer.ifremer.fr/doc/00239/34995/33536.pdf |
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| Roa Pascuali, Liliana; Demarcq, Herve; Nieblas, Anne-elise. |
| In order to optimize frontal detection in sea surface temperature fields at 4 km resolution, a combined statistical and expert-based approach is applied to test different spatial smoothing of the data prior to the detection process. Fronts are usually detected at 1 km resolution using the histogram-based, single image edge detection (SIED) algorithm developed by Cayula and Cornillon in 1992, with a standard preliminary smoothing using a median filter and a 3 × 3 pixel kernel. Here, detections are performed in three study regions (off Morocco, the Mozambique Channel, and north-western Australia) and across the Indian Ocean basin using the combination of multiple windows (CMW) method developed by Nieto, Demarcq and McClatchie in 2012 which improves on the... |
| Tipo: Text |
Palavras-chave: Mesoscale thermal fronts; Preliminary smoothing; Sea surface temperature; 4 km resolution; Gradient intensity classification; Expert-based approach; Detection efficiency; Indian Ocean. |
| Ano: 2015 |
URL: http://archimer.ifremer.fr/doc/00269/37998/42023.pdf |
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| Aoki, Yoshinori; Jusup, Marko; Nieblas, Anne-elise; Bonhommeau, Sylvain; Kiyofuji, Hidetada; Kitagawa, Takashi. |
| Formal approaches to physiological energetics, such as the Dynamic Energy Budget (DEB) theory, enable interspecies comparisons by uniformly describing how individuals of different species acquire and utilise energy. We used the DEB theory to infer the energy budgets of three commercial tuna species (skipjack, Pacific bluefin, and Atlantic bluefin) throughout all stages of ontogenetic development—from an egg to an adult individual and its eggs. Energy budgets were inferred from exhaustive datasets fed into a DEB-based mathematical model tailored for tuna fish until reaching a high goodness of fit and thus reliable estimates of the model parameters. The life histories of all three species are strongly influenced by morphological and physiological adaptations... |
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Palavras-chave: Accelerated ontogeny; Bluefin tuna; Dynamic Energy Budget theory; Ecology and evolution; Energy speculators; Skipjack tuna. |
| Ano: 2020 |
URL: https://archimer.ifremer.fr/doc/00600/71238/69605.pdf |
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| Bonhommeau, Sylvain; Dubroca, Laurent; Le Pape, Olivier; Barde, Julien; Kaplan, David; Chassot, Emmanuel; Nieblas, Anne-elise. |
| Trophic levels are critical for synthesizing species' diets, depicting energy pathways, understanding food web dynamics and ecosystem functioning, and monitoring ecosystem health. Specifically, trophic levels describe the position of species in a food web, from primary producers to apex predators (range, 1-5). Small differences in trophic level can reflect large differences in diet. Although trophic levels are among the most basic information collected for animals in ecosystems, a human trophic level (HTL) has never been defined. Here, we find a global HTL of 2.21, i.e., the trophic level of anchoveta. This value has increased with time, consistent with the global trend toward diets higher in meat. National HTLs ranging between 2.04 and 2.57 reflect a... |
| Tipo: Text |
Palavras-chave: Human ecology; Nutrition transition; Trophic ecology. |
| Ano: 2013 |
URL: http://archimer.ifremer.fr/doc/00171/28190/26609.pdf |
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| Van Beveren, Elisabeth; Fromentin, Jean-marc; Bonhommeau, Sylvain; Nieblas, Anne-elise; Metral, Luisa; Brisset, Blandine; Jusup, Marko; Bauer, Robert Klaus; Brosset, Pablo; Saraux, Claire. |
| Thunnus thynnus Sardina pilchardus Engraulis encrasicolus |
| Tipo: Text |
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| Ano: 2017 |
URL: https://archimer.ifremer.fr/doc/00371/48215/50340.pdf |
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| Ayata, Sakina-dorothee; Irisson, Jean-olivier; Aubert, Anais; Berline, Leo; Dutay, Jean-claude; Mayot, Nicolas; Nieblas, Anne-elise; D'Ortenzio, Fabrizio; Palmieri, Julien; Reygondeau, Gabriel; Rossi, Vincent; Guieu, Cecile. |
| Regionalisation aims at delimiting provinces within which physical conditions, chemical properties, and biological communities are reasonably homogeneous. This article proposes a synthesis of the many recent regionalisations of the open-sea regions of the Mediterranean Sea. The nine studies considered here defined regions based on different, and sometimes complementary, criteria: dynamics of surface chlorophyll concentration, ocean currents, three-dimensional hydrological and biogeochemical properties, or the distribution of organisms. Although they identified different numbers and patterns of homogeneous regions, their compilation in the epipelagic zone identifies nine consensus frontiers, eleven consensus regions with relatively homogeneous conditions,... |
| Tipo: Text |
Palavras-chave: Mediterranean Sea; Regionalisation; Biogeochemistry; Circulation; Mesoscale features; Epipelagic ocean; Management; Spatial planning. |
| Ano: 2018 |
URL: https://archimer.ifremer.fr/doc/00405/51673/52221.pdf |
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| Santos, Amp; Nieblas, Anne-elise; Verley, P.; Teles-machado, A.; Bonhommeau, Sylvain; Lett, C.; Garrido, S.; Peliz, A.. |
| The European sardine (Sardina pilchardus) is the most important small pelagic fishery of the Western Iberia Upwelling Ecosystem (WIUE). Recently, recruitment of this species has declined due to changing environmental conditions. Furthermore, controversies exist regarding its population structure with barriers thought to exist between the Atlantic-Iberian Peninsula, Northern Africa, and the Mediterranean. Few studies have investigated the transport and dispersal of sardine eggs and larvae off Iberia and the subsequent impact on larval recruitment variability. Here, we examine these issues using a Regional Ocean Modeling System climatology (1989-2008) coupled to the Lagrangian transport model, Ichthyop. Using biological parameters from the literature, we... |
| Tipo: Text |
Palavras-chave: Iberian Peninsula; Sardina pilchardus; Larval dispersal; Lagrangian transport; Ichthyop; Regional Ocean Modeling System. |
| Ano: 2018 |
URL: https://archimer.ifremer.fr/doc/00427/53814/54784.pdf |
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