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Registros recuperados: 3
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De novo transcriptome assembly for the tropical grass Panicum maximum Jacq. Repositório Alice
SILVA, G. T.; SILVA, C. B. C.; JANK, L.; SOUZA, A. P..
Guinea grass (Panicum maximum Jacq.) is a tropical African grass often used to feed beef cattle, which is an important economic activity in Brazil. Brazil is the leader in global meat exportation because of its exclusively pasture-raised bovine herds. Guinea grass also has potential uses in bioenergy production due to its elevated biomass generation through the C4 photosynthesis pathway. We generated approximately 13 Gb of data from Illumina sequencing of P. maximum leaves. Four different genotypes were sequenced, and the combined reads were assembled de novo into 38,192 unigenes and annotated; approximately 63% of the unigenes had homology to other proteins in the NCBI non-redundant protein database. Functional classification through COG (Clusters of...
Tipo: Artigo de periódico Palavras-chave: Panicum maximum; Carne.; Alimento animal; Graminea tropical; Beef cattle; Megathyrsus maximus..
Ano: 2013 URL: http://www.alice.cnptia.embrapa.br/alice/handle/doc/981465
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Development of single nucleotide polymorphism (SNP) markers for genetic map saturation of Urochloa humidicola. Repositório Alice
MORAES, A. da C. L.; VIGNA, B. B. Z.; OLIVEIRA, F. A. de; SILVA, C. B. C.; VALLE, C. B. do; SOUZA, A. P. de.
Large areas of Brazil are destined for the cultivation of pasture, where the purpose is to feed cattle.
Tipo: Separatas Palavras-chave: Koronivia grass; RNASeq.; Polyploidy..
Ano: 2017 URL: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1080106
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SNP genotyping allows an in-depth characterisation of the genome of sugarcane and other complex autopolyploids. Repositório Alice
GARCIA, A. A. F.; MOLLINARI, M.; MARCONI, T. G.; SERANG, O. R.; SILVA, R. R.; VIEIRA, M. L. C.; VICENTINI, R.; COSTA, E. A.; MANCINI, M. C.; GARCIA, M. O. S.; PASTINA, M. M.; GAZAFFI, R.; MARTINS, E. R. F.; DAHMER, N.; SFORÇA, D. A.; SILVA, C. B. C.; BUNDOCK, P.; HENRY, R. J.; SOUZA, G. M.; SLUYS, M.-A. V.; LANDELL, M. G. A.; CARNEIRO, M. S.; VINCENTZ, M. A. G.; PINTO, L. R.; VENCOVSKY, R.; SOUZA, A. P..
Many plant species of great economic value (e.g., potato, wheat, cotton, and sugarcane) are polyploids. Despite the essential roles of autopolyploid plants in human activities, our genetic understanding of these species is still poor. Recent progress in instrumentation and biochemical manipulation has led to the accumulation of an incredible amount of genomic data. In this study, we demonstrate for the first time a successful genetic analysis in a highly polyploid genome (sugarcane) by the quantitative analysis of single-nucleotide polymorphism (SNP) allelic dosage and the application of a new data analysis framework. This study provides a better understanding of autopolyploid genomic structure and is a sound basis for genetic studies. The proposed methods...
Tipo: Artigo de periódico Palavras-chave: Genótipo; Genética vegetal; Genoma; Cana de açúcar; Genotype; Genome; Plant genetics.
Ano: 2013 URL: http://www.alice.cnptia.embrapa.br/alice/handle/doc/976559
Registros recuperados: 3
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