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Registros recuperados: 6
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An ecoinformatics tool for microbial community studies: Supervised classification of amplicon length heterogeneity (ALH) profiles of 16S rRNA NWISRL
Yang, C.; Mills, D.; Mathee, K.; Wang, Y.; Jayachandran, K.; Sikaroodi, M.; Gillevet, P.; Entry, J.; Narasimhan, N..
Tipo: Article Palavras-chave: Research methodology; Mass Import - autoclassified (may be erroneous).
Ano: 2006 URL: http://eprints.nwisrl.ars.usda.gov/32/1/1181.pdf
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Elevated prolactin redirects secretory vesicle traffic in rabbit lacrimal acinar cells Inra
Wang, Y.; Chui, C.T.; Nakamura, T.; Walker, A.M.; Petridou, B.; Trousdale, M.D.; Hamm-Alvarez, S.F.; Schechter, J.E.; Mircheff, A.K..
Tipo: Journal Article Palavras-chave: PROLACTINE; GLANDE LACRIMALE LACRIMAR ACINAR CELLS; OCULAR SURFACE; MUCOSAL IMMUNITY; PREGNANCY; SJOGREN'S SYNDROME.
Ano: 2007 URL: http://www.prodinra.inra.fr/prodinra/pinra/doc.xsp?id=PROD2008ac235f39&uri=/notices/prodinra1/2010/09/
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Examining new phylogenetic markers to uncover the evolutionary history of early-diverging fungi: comparing MCM7, TSR1 and rRNA genes for single- and multi-gene analyses of the Kickxellomycotina Naturalis
Tretter, E.D.; Johnson, E.M.; Wang, Y.; Kandel, P.; White, M.M..
The recently recognised protein-coding genes MCM7 and TSR1 have shown significant promise for phylogenetic resolution within the Ascomycota and Basidiomycota, but have remained unexamined within other fungal groups (except for Mucorales). We designed and tested primers to amplify these genes across early-diverging fungal clades, with emphasis on the Kickxellomycotina, zygomycetous fungi with characteristic flared septal walls forming pores with lenticular plugs. Phylogenetic tree resolution and congruence with MCM7 and TSR1 were compared against those inferred with nuclear small (SSU) and large subunit (LSU) rRNA genes. We also combined MCM7 and TSR1 data with the rDNA data to create 3- and 4-gene trees of the Kickxellomycotina that help to resolve...
Tipo: Article / Letter to the editor Palavras-chave: DNA replication licensing factor; Harpellales; Kickxellomycotina; MCM7; MS277; MS456; Ribosomal biogenesis protein; Trichomycetes; TSR1; Zygomycota.
Ano: 2013 URL: http://www.repository.naturalis.nl/record/532223
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Molecular taxonomy of Chinese truffles belonging to the Tuber rufum and Tuber puberulum groups Inra
Wang, Y.; Tan, Z.; Murat, C.; Jeandroz, S.; Le Tacon, F..
The taxonomic position of several Chinese Tuber species belonging to the Rufum- and Puberulum-groups were tentatively determined by analyzing the nuclear ITS region and mitochondrial large ribosomal RNA (mt LrRNA) sequences of several dried ascomata harvested all over China in the last 20 years and compared with American and European samples. Within the Rufum-group, it was possible to differentiate the specimens harvested on the three continents: Asia (China), Europe, and North America. In China, three species belonging to the Rufum-group could be validly recognized: T. huidongense, T. liatongense, and T. taiyuanense. The taxonomy of the Puberulum group appeared much more complex. Within the Puberulum-group, it was not possible to clearly separate the...
Tipo: Journal Article Palavras-chave: SEQUENCE ITS; GRAND GENE ARN MITOCHONDRIAL RIBOSOMAL MITOCHONDRIAL LrRNA; NUCLEAR ITS; RUFUM GROUP; PUBERULUM GROUP.
Ano: 2007 URL: http://www.prodinra.inra.fr/prodinra/pinra/doc.xsp?id=PROD2007649ecde9&uri=/notices/prodinra1/2008/02/
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Phylogenetic relationships between Tuber pseudoexcavatum, a Chinese truffle, and other Tuber species based on parsimony and distance analysis of four different gene sequences Inra
Wang, Y.; Tan, Z.; Zhang, D.C.; Murat, C.; Jeandroz, S.; Le Tacon, F..
Phylogenetic relationships between Tuber pseudoexcavatum and other Tuber species were investigated by studying the sequences of four genes: 5.8S-ITS2, btubulin, protein kinase C and elongation factor 1a. The four phylogenetic trees allowed to differentiate the black truffle clade, composed of two subclades, one comprising the Asian black truffles (T. indicum, T. sinense, T. himalayense) and the Perigord black truffle (T. melanosporum), the second comprising T. pseudoexcavatum and T. brumale. These two subclades diverged relatively early. We propose a common ancestor, located between Europe and China, to all the black truffles. The T. brumale/pseudoexcavatum subclade would have started to diverge and migrate first, T. brumale towards Europe through a...
Tipo: Journal Article Palavras-chave: GENETIQUE DES POPULATIONS; SEQUENCE NULCEOTIDIQUE; BIOGEOGRAPHIE TUBER PSEUDOEXCAVATUM; ITS; BETA-TUBULIN; EF-1ALPHA GENE; PROTEIN KINASE C; PHYLOGENY; BIOGEOGRAPHY.
Ano: 2006 URL: http://www.prodinra.inra.fr/prodinra/pinra/doc.xsp?id=PROD2007d3a4a50d&uri=/notices/prodinra1/2008/03/
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Unravelling Colletotrichum species associated with Camellia: employing ApMat and GS loci to resolve species in the C. gloeosporioides complex Naturalis
Liu, F.; Weir, B.S.; Damm, U.; Crous, P.W.; Wang, Y.; Liu, B.; Wang, M.; Zhang, M.; Cai, L..
"We investigated the phylogenetic diversity of 144 Colletotrichum isolates associated with symptomatic and asymptomatic tissues of Camellia sinensis and other Camellia spp. from seven provinces in China (Fujian, Guizhou, Henan, Jiangxi, Sichuan, Yunnan, Zhejiang), and seven isolates obtained from other countries, including Indonesia, UK, and the USA. Based on multi-locus (ACT, ApMat, CAL, GAPDH, GS, ITS, TUB2) phylogenetic analyses and phenotypic characters, 11 species were distinguished, including nine well-characterised species (C. alienum, C. boninense, C. camelliae, C. cliviae, C. fioriniae, C. fructicola, C. gloeosporioides, C. karstii, C. siamense), and two novel species (C. henanense and C. jiangxiense). Of these, C. camelliae proved to be the...
Tipo: Article / Letter to the editor Palavras-chave: Camellia; Colletotrichum; Morphology; Phylogeny; Tea plants.
Ano: 2015 URL: http://www.repository.naturalis.nl/record/588701
Registros recuperados: 6
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